RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ERBINQ96RT1 1412 aa26.26■■□□□ 1.79
RUNX3-202ENST00000338888 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
RUNX3-202ENST00000338888 BECN1Q14457 450 aa26.25■■□□□ 1.79
RUNX3-202ENST00000338888 ARXQ96QS3 562 aa26.25■■□□□ 1.79
RUNX3-202ENST00000338888 PREX2Q70Z35 1606 aa26.24■■□□□ 1.79
RUNX3-202ENST00000338888 L1TD1Q5T7N2 865 aaKnown RBP26.24■■□□□ 1.79
RUNX3-202ENST00000338888 SAMD9LQ8IVG5 1584 aa26.24■■□□□ 1.79
RUNX3-202ENST00000338888 UHRF1BP1LA0JNW5 1464 aa26.24■■□□□ 1.79
RUNX3-202ENST00000338888 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
RUNX3-202ENST00000338888 CCDC144AA2RUR9 1427 aa26.23■■□□□ 1.79
RUNX3-202ENST00000338888 SPINK5Q9NQ38 1064 aaPredicted RBP26.23■■□□□ 1.79
RUNX3-202ENST00000338888 CCDC146Q8IYE0 955 aa26.22■■□□□ 1.79
RUNX3-202ENST00000338888 EIF3AQ14152 1382 aaKnown RBP26.21■■□□□ 1.79
RUNX3-202ENST00000338888 KNSTRNQ9Y448 316 aa26.2■■□□□ 1.78
RUNX3-202ENST00000338888 TRMT2AQ8IZ69 625 aaKnown RBP26.18■■□□□ 1.78
RUNX3-202ENST00000338888 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
RUNX3-202ENST00000338888 SYCP2Q9BX26 1530 aa26.17■■□□□ 1.78
RUNX3-202ENST00000338888 CCDC141Q6ZP82 1450 aa26.16■■□□□ 1.78
RUNX3-202ENST00000338888 PRDM15P57071 1507 aaPredicted RBP26.16■■□□□ 1.78
RUNX3-202ENST00000338888 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
RUNX3-202ENST00000338888 A2MP01023 1474 aa26.15■■□□□ 1.78
RUNX3-202ENST00000338888 APAF1O14727 1248 aa26.14■■□□□ 1.78
RUNX3-202ENST00000338888 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.78
RUNX3-202ENST00000338888 MAGI2Q86UL8 1455 aa26.14■■□□□ 1.77
RUNX3-202ENST00000338888 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
RUNX3-202ENST00000338888 ARHGEF5Q12774 1597 aa26.13■■□□□ 1.77
RUNX3-202ENST00000338888 MAPK8IP3Q9UPT6 1336 aa26.13■■□□□ 1.77
RUNX3-202ENST00000338888 NKTRP30414 1462 aaKnown RBP26.12■■□□□ 1.77
RUNX3-202ENST00000338888 XRCC6P12956 609 aaKnown RBP eCLIP26.12■■□□□ 1.77
RUNX3-202ENST00000338888 AMER1Q5JTC6 1135 aaPredicted RBP26.12■■□□□ 1.77
RUNX3-202ENST00000338888 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
RUNX3-202ENST00000338888 EFCAB2Q5VUJ9 269 aa26.11■■□□□ 1.77
RUNX3-202ENST00000338888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.11■■□□□ 1.77
RUNX3-202ENST00000338888 COG6Q9Y2V7 657 aa26.11■■□□□ 1.77
RUNX3-202ENST00000338888 CLUAP1Q96AJ1 413 aa26.1■■□□□ 1.77
RUNX3-202ENST00000338888 NAP1L5Q96NT1 182 aaPredicted RBP26.1■■□□□ 1.77
RUNX3-202ENST00000338888 PLCH2O75038 1416 aa26.1■■□□□ 1.77
RUNX3-202ENST00000338888 VIRMAQ69YN4 1812 aaKnown RBP26.09■■□□□ 1.77
RUNX3-202ENST00000338888 PANK1Q8TE04 598 aa26.09■■□□□ 1.77
RUNX3-202ENST00000338888 CGNL1Q0VF96 1302 aa26.09■■□□□ 1.77
RUNX3-202ENST00000338888 GOLGA6L3A6NEY3 463 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 GZF1Q9H116 711 aaPredicted RBP26.08■■□□□ 1.77
RUNX3-202ENST00000338888 SPRYD3Q8NCJ5 442 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 TBC1D2Q9BYX2 928 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 PLA2R1Q13018 1463 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 NLRP1Q9C000 1473 aa26.08■■□□□ 1.77
RUNX3-202ENST00000338888 PANK2Q9BZ23 570 aa26.07■■□□□ 1.76
RUNX3-202ENST00000338888 WDR7Q9Y4E6 1490 aa26.07■■□□□ 1.76
RUNX3-202ENST00000338888 CANXP27824 592 aaKnown RBP26.07■■□□□ 1.76
RUNX3-202ENST00000338888 E9PSI1 815 aa26.06■■□□□ 1.76
RUNX3-202ENST00000338888 PNNQ9H307 717 aaKnown RBP26.06■■□□□ 1.76
RUNX3-202ENST00000338888 LAMC1P11047 1609 aa26.06■■□□□ 1.76
RUNX3-202ENST00000338888 UPF2Q9HAU5 1272 aaKnown RBP26.05■■□□□ 1.76
RUNX3-202ENST00000338888 PDE3AQ14432 1141 aa26.05■■□□□ 1.76
RUNX3-202ENST00000338888 PKNOX2Q96KN3 472 aa26.03■■□□□ 1.76
RUNX3-202ENST00000338888 TBC1D32Q96NH3 1257 aa26.03■■□□□ 1.76
RUNX3-202ENST00000338888 NPM1P06748 294 aaKnown RBP eCLIP26.02■■□□□ 1.76
RUNX3-202ENST00000338888 GLIPR1L2Q4G1C9 344 aa26.02■■□□□ 1.76
RUNX3-202ENST00000338888 FSD2A1L4K1 749 aa26.02■■□□□ 1.76
RUNX3-202ENST00000338888 MCM4P33991 863 aa26.01■■□□□ 1.75
RUNX3-202ENST00000338888 CENPJQ9HC77 1338 aaPredicted RBP26■■□□□ 1.75
RUNX3-202ENST00000338888 CLCN1P35523 988 aa26■■□□□ 1.75
RUNX3-202ENST00000338888 ASXL2Q76L83 1435 aa25.99■■□□□ 1.75
RUNX3-202ENST00000338888 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
RUNX3-202ENST00000338888 PIK3C2GO75747 1445 aa25.98■■□□□ 1.75
RUNX3-202ENST00000338888 TRAPPC8Q9Y2L5 1435 aa25.98■■□□□ 1.75
RUNX3-202ENST00000338888 EIF2AK4Q9P2K8 1649 aaKnown RBP25.96■■□□□ 1.75
RUNX3-202ENST00000338888 VSIG10Q8N0Z9 540 aa25.96■■□□□ 1.75
RUNX3-202ENST00000338888 PCDHB15Q9Y5E8 787 aa25.95■■□□□ 1.74
RUNX3-202ENST00000338888 HSP90AA1P07900 732 aaKnown RBP25.94■■□□□ 1.74
RUNX3-202ENST00000338888 HSP90AA2PQ14568 343 aaPredicted RBP25.94■■□□□ 1.74
RUNX3-202ENST00000338888 PDZRN3Q9UPQ7 1066 aa25.94■■□□□ 1.74
RUNX3-202ENST00000338888 ASXL1Q8IXJ9 1541 aa25.94■■□□□ 1.74
RUNX3-202ENST00000338888 TRAK2O60296 914 aa25.93■■□□□ 1.74
RUNX3-202ENST00000338888 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
RUNX3-202ENST00000338888 ABCC1P33527 1531 aa25.92■■□□□ 1.74
RUNX3-202ENST00000338888 CDCA8Q53HL2 280 aa25.91■■□□□ 1.74
RUNX3-202ENST00000338888 TNNQ9UQP3 1299 aa25.9■■□□□ 1.74
RUNX3-202ENST00000338888 SPAG9O60271 1321 aaKnown RBP25.9■■□□□ 1.74
RUNX3-202ENST00000338888 NINLQ9Y2I6 1382 aa25.9■■□□□ 1.74
RUNX3-202ENST00000338888 MAST1Q9Y2H9 1570 aa25.9■■□□□ 1.74
RUNX3-202ENST00000338888 WWC1Q8IX03 1113 aa25.89■■□□□ 1.73
RUNX3-202ENST00000338888 FANCAO15360 1455 aa25.89■■□□□ 1.73
RUNX3-202ENST00000338888 ZMYND15Q9H091 742 aa25.88■■□□□ 1.73
RUNX3-202ENST00000338888 RLBP1P12271 317 aa25.87■■□□□ 1.73
RUNX3-202ENST00000338888 MRE11P49959 708 aa25.87■■□□□ 1.73
RUNX3-202ENST00000338888 CHMP5Q9NZZ3 219 aa25.87■■□□□ 1.73
RUNX3-202ENST00000338888 NEUROD2Q15784 382 aa25.86■■□□□ 1.73
RUNX3-202ENST00000338888 RRP9O43818 475 aaKnown RBP25.85■■□□□ 1.73
RUNX3-202ENST00000338888 BCL2L13Q9BXK5 485 aa25.84■■□□□ 1.73
RUNX3-202ENST00000338888 SYNMO15061 1565 aa25.84■■□□□ 1.73
RUNX3-202ENST00000338888 RARSP54136 660 aaKnown RBP25.84■■□□□ 1.73
RUNX3-202ENST00000338888 MYH16Q9H6N6 1097 aa25.84■■□□□ 1.73
RUNX3-202ENST00000338888 GRPEL1Q9HAV7 217 aa25.83■■□□□ 1.73
RUNX3-202ENST00000338888 ABCA9Q8IUA7 1624 aa25.83■■□□□ 1.73
RUNX3-202ENST00000338888 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.72
RUNX3-202ENST00000338888 NGEFQ8N5V2 710 aa25.83■■□□□ 1.72
RUNX3-202ENST00000338888 C22orf23Q9BZE7 217 aa25.83■■□□□ 1.72
RUNX3-202ENST00000338888 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms