RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 KIF3BO15066 747 aa15.55■□□□□ 0.08
RBM39-202ENST00000338163 FRMPD1Q5SYB0 1578 aa15.55■□□□□ 0.08
RBM39-202ENST00000338163 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
RBM39-202ENST00000338163 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
RBM39-202ENST00000338163 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
RBM39-202ENST00000338163 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
RBM39-202ENST00000338163 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
RBM39-202ENST00000338163 PZPP20742 1482 aa15.53■□□□□ 0.08
RBM39-202ENST00000338163 KIDINS220Q9ULH0 1771 aa15.53■□□□□ 0.08
RBM39-202ENST00000338163 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
RBM39-202ENST00000338163 DCAF11Q8TEB1 546 aa15.53■□□□□ 0.08
RBM39-202ENST00000338163 PDE3BQ13370 1112 aa15.52■□□□□ 0.08
RBM39-202ENST00000338163 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.07
RBM39-202ENST00000338163 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
RBM39-202ENST00000338163 NUP155O75694 1391 aa15.51■□□□□ 0.07
RBM39-202ENST00000338163 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
RBM39-202ENST00000338163 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
RBM39-202ENST00000338163 GGT6Q6P531 493 aa15.51■□□□□ 0.07
RBM39-202ENST00000338163 A2MP01023 1474 aa15.51■□□□□ 0.07
RBM39-202ENST00000338163 ERBINQ96RT1 1412 aa15.49■□□□□ 0.07
RBM39-202ENST00000338163 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
RBM39-202ENST00000338163 RGS3P49796 1198 aa15.48■□□□□ 0.07
RBM39-202ENST00000338163 MAGI2Q86UL8 1455 aa15.48■□□□□ 0.07
RBM39-202ENST00000338163 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
RBM39-202ENST00000338163 MLECQ14165 292 aa15.47■□□□□ 0.07
RBM39-202ENST00000338163 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
RBM39-202ENST00000338163 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.07
RBM39-202ENST00000338163 ATP10AO60312 1499 aa15.46■□□□□ 0.07
RBM39-202ENST00000338163 RALGAPBQ86X10 1494 aa15.45■□□□□ 0.06
RBM39-202ENST00000338163 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
RBM39-202ENST00000338163 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
RBM39-202ENST00000338163 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
RBM39-202ENST00000338163 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
RBM39-202ENST00000338163 KANK1Q14678 1352 aa15.4■□□□□ 0.06
RBM39-202ENST00000338163 ARHGEF40Q8TER5 1519 aa15.4■□□□□ 0.06
RBM39-202ENST00000338163 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
RBM39-202ENST00000338163 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
RBM39-202ENST00000338163 NBPF1Q3BBV0 1214 aa15.38■□□□□ 0.05
RBM39-202ENST00000338163 PANK3Q9H999 370 aa15.38■□□□□ 0.05
RBM39-202ENST00000338163 ARXQ96QS3 562 aa15.37■□□□□ 0.05
RBM39-202ENST00000338163 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
RBM39-202ENST00000338163 KDM2BQ8NHM5 1336 aa15.37■□□□□ 0.05
RBM39-202ENST00000338163 FAM135AQ9P2D6 1515 aa15.37■□□□□ 0.05
RBM39-202ENST00000338163 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
RBM39-202ENST00000338163 UBE2Q2Q8WVN8 375 aa15.37■□□□□ 0.05
RBM39-202ENST00000338163 WDR43Q15061 677 aaKnown RBP eCLIP15.35■□□□□ 0.053e-7■■□□□ 11.8
RBM39-202ENST00000338163 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
RBM39-202ENST00000338163 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
RBM39-202ENST00000338163 UNC13BO14795 1591 aa15.34■□□□□ 0.05
RBM39-202ENST00000338163 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
RBM39-202ENST00000338163 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
RBM39-202ENST00000338163 SIGLEC1Q9BZZ2 1709 aa15.32■□□□□ 0.04
RBM39-202ENST00000338163 KDM5DQ9BY66 1539 aa15.32■□□□□ 0.04
RBM39-202ENST00000338163 MROH1Q8NDA8 1641 aa15.32■□□□□ 0.04
RBM39-202ENST00000338163 PRDM15P57071 1507 aaPredicted RBP15.31■□□□□ 0.04
RBM39-202ENST00000338163 POGKQ9P215 609 aa15.31■□□□□ 0.04
RBM39-202ENST00000338163 DISP3Q9P2K9 1392 aa15.31■□□□□ 0.04
RBM39-202ENST00000338163 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
RBM39-202ENST00000338163 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 AGLP35573 1532 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 REREQ9P2R6 1566 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
RBM39-202ENST00000338163 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
RBM39-202ENST00000338163 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
RBM39-202ENST00000338163 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
RBM39-202ENST00000338163 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
RBM39-202ENST00000338163 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
RBM39-202ENST00000338163 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
RBM39-202ENST00000338163 E9PCH4 1651 aa15.27■□□□□ 0.04
RBM39-202ENST00000338163 ABCC3O15438 1527 aa15.27■□□□□ 0.03
RBM39-202ENST00000338163 TMF1P82094 1093 aa15.27■□□□□ 0.03
RBM39-202ENST00000338163 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
RBM39-202ENST00000338163 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
RBM39-202ENST00000338163 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
RBM39-202ENST00000338163 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
RBM39-202ENST00000338163 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
RBM39-202ENST00000338163 BCAR3O75815 825 aa15.25■□□□□ 0.03
RBM39-202ENST00000338163 TESK2Q96S53 571 aa15.25■□□□□ 0.03
RBM39-202ENST00000338163 NPATQ14207 1427 aa15.24■□□□□ 0.03
RBM39-202ENST00000338163 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
RBM39-202ENST00000338163 CEP152O94986 1710 aa15.24■□□□□ 0.03
RBM39-202ENST00000338163 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
RBM39-202ENST00000338163 SEC24BO95487 1268 aa15.23■□□□□ 0.03
RBM39-202ENST00000338163 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
RBM39-202ENST00000338163 PLA2R1Q13018 1463 aa15.23■□□□□ 0.03
RBM39-202ENST00000338163 PPP2R1AP30153 589 aa15.23■□□□□ 0.03
RBM39-202ENST00000338163 BECN1Q14457 450 aa15.23■□□□□ 0.03
RBM39-202ENST00000338163 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
RBM39-202ENST00000338163 LMTK2Q8IWU2 1503 aa15.22■□□□□ 0.03
RBM39-202ENST00000338163 IGHDP01880 384 aa15.22■□□□□ 0.03
RBM39-202ENST00000338163 TET3O43151 1660 aa15.22■□□□□ 0.03
RBM39-202ENST00000338163 ZMYM3Q14202 1370 aa15.21■□□□□ 0.03
RBM39-202ENST00000338163 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
RBM39-202ENST00000338163 CFAP65Q6ZU64 1925 aaKnown RBP15.2■□□□□ 0.02
RBM39-202ENST00000338163 CHGAP10645 457 aaKnown RBP15.2■□□□□ 0.02
RBM39-202ENST00000338163 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
RBM39-202ENST00000338163 APAF1O14727 1248 aa15.2■□□□□ 0.02
RBM39-202ENST00000338163 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms