RNA–Protein interactions for RNA: ENST00000335440.10

PDE9A-203, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-203ENST00000335440 RPGRIP1LQ68CZ1 1315 aa25.27■■□□□ 1.64
PDE9A-203ENST00000335440 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
PDE9A-203ENST00000335440 ZFYVE9O95405 1425 aa25.26■■□□□ 1.63
PDE9A-203ENST00000335440 RIMS2Q9UQ26 1411 aa25.24■■□□□ 1.63
PDE9A-203ENST00000335440 TONSLQ96HA7 1378 aa25.24■■□□□ 1.63
PDE9A-203ENST00000335440 HDGFP51858 240 aaKnown RBP25.23■■□□□ 1.63
PDE9A-203ENST00000335440 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
PDE9A-203ENST00000335440 HSPA2P54652 639 aa25.2■■□□□ 1.63
PDE9A-203ENST00000335440 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.2■■□□□ 1.63
PDE9A-203ENST00000335440 EID1Q9Y6B2 187 aa25.2■■□□□ 1.63
PDE9A-203ENST00000335440 SCAF11Q99590 1463 aaKnown RBP25.2■■□□□ 1.62
PDE9A-203ENST00000335440 MYOM2P54296 1465 aa25.19■■□□□ 1.62
PDE9A-203ENST00000335440 STAC3Q96MF2 364 aa25.19■■□□□ 1.62
PDE9A-203ENST00000335440 ANKLE2Q86XL3 938 aa25.18■■□□□ 1.62
PDE9A-203ENST00000335440 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
PDE9A-203ENST00000335440 STRCQ7RTU9 1775 aa25.17■■□□□ 1.62
PDE9A-203ENST00000335440 VGFO15240 615 aaPredicted RBP25.17■■□□□ 1.62
PDE9A-203ENST00000335440 TXNDC2Q86VQ3 553 aa25.17■■□□□ 1.62
PDE9A-203ENST00000335440 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
PDE9A-203ENST00000335440 LTKP29376 864 aa25.16■■□□□ 1.62
PDE9A-203ENST00000335440 PPP1R15AO75807 674 aaPredicted RBP25.15■■□□□ 1.62
PDE9A-203ENST00000335440 MED14O60244 1454 aa25.13■■□□□ 1.61
PDE9A-203ENST00000335440 NRXN1Q9ULB1 1477 aa25.13■■□□□ 1.61
PDE9A-203ENST00000335440 NUTM2DQ5VT03 806 aaPredicted RBP25.12■■□□□ 1.61
PDE9A-203ENST00000335440 IQGAP1P46940 1657 aa25.12■■□□□ 1.61
PDE9A-203ENST00000335440 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
PDE9A-203ENST00000335440 KDM2AQ9Y2K7 1162 aa25.1■■□□□ 1.61
PDE9A-203ENST00000335440 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
PDE9A-203ENST00000335440 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
PDE9A-203ENST00000335440 PIK3C2GO75747 1445 aa25.09■■□□□ 1.61
PDE9A-203ENST00000335440 NRXN3Q9Y4C0 1643 aa25.09■■□□□ 1.61
PDE9A-203ENST00000335440 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
PDE9A-203ENST00000335440 NPHP4O75161 1426 aaPredicted RBP25.07■■□□□ 1.6
PDE9A-203ENST00000335440 LAMC1P11047 1609 aa25.06■■□□□ 1.6
PDE9A-203ENST00000335440 PRAG1Q86YV5 1406 aa25.06■■□□□ 1.6
PDE9A-203ENST00000335440 KIAA1210Q9ULL0 1709 aa25.05■■□□□ 1.6
PDE9A-203ENST00000335440 DIP2AQ14689 1571 aa25.04■■□□□ 1.6
PDE9A-203ENST00000335440 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
PDE9A-203ENST00000335440 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
PDE9A-203ENST00000335440 BCANQ96GW7 911 aa25.01■■□□□ 1.59
PDE9A-203ENST00000335440 ADAMTS13Q76LX8 1427 aa25.01■■□□□ 1.59
PDE9A-203ENST00000335440 TRPM1Q7Z4N2 1603 aa25■■□□□ 1.59
PDE9A-203ENST00000335440 DMRT2Q9Y5R5 561 aa24.99■■□□□ 1.59
PDE9A-203ENST00000335440 C14orf93Q9H972 538 aaKnown RBP24.97■■□□□ 1.59
PDE9A-203ENST00000335440 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
PDE9A-203ENST00000335440 TBX22Q9Y458 520 aa24.96■■□□□ 1.59
PDE9A-203ENST00000335440 NBPF8Q3BBV2 869 aa24.95■■□□□ 1.58
PDE9A-203ENST00000335440 SLC26A8Q96RN1 970 aa24.95■■□□□ 1.58
PDE9A-203ENST00000335440 CFAP70Q5T0N1 1121 aa24.93■■□□□ 1.58
PDE9A-203ENST00000335440 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
PDE9A-203ENST00000335440 RALGAPBQ86X10 1494 aa24.92■■□□□ 1.58
PDE9A-203ENST00000335440 PIK3R4Q99570 1358 aa24.91■■□□□ 1.58
PDE9A-203ENST00000335440 ADGRB1O14514 1584 aa24.91■■□□□ 1.58
PDE9A-203ENST00000335440 ASXL1Q8IXJ9 1541 aa24.9■■□□□ 1.58
PDE9A-203ENST00000335440 METP08581 1390 aa24.89■■□□□ 1.57
PDE9A-203ENST00000335440 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
PDE9A-203ENST00000335440 KNDC1Q76NI1 1749 aa24.85■■□□□ 1.57
PDE9A-203ENST00000335440 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
PDE9A-203ENST00000335440 NWD1Q149M9 1564 aa24.85■■□□□ 1.57
PDE9A-203ENST00000335440 XRN1Q8IZH2 1706 aaKnown RBP24.85■■□□□ 1.57
PDE9A-203ENST00000335440 NBPF1Q3BBV0 1214 aa24.84■■□□□ 1.57
PDE9A-203ENST00000335440 TMEM132EQ6IEE7 984 aa24.83■■□□□ 1.57
PDE9A-203ENST00000335440 YTHDC2Q9H6S0 1430 aaKnown RBP24.83■■□□□ 1.56
PDE9A-203ENST00000335440 STRCP1A6NGW2 1772 aa24.82■■□□□ 1.56
PDE9A-203ENST00000335440 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
PDE9A-203ENST00000335440 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
PDE9A-203ENST00000335440 TECPR2O15040 1411 aa24.79■■□□□ 1.56
PDE9A-203ENST00000335440 KCNA6P17658 529 aa24.79■■□□□ 1.56
PDE9A-203ENST00000335440 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
PDE9A-203ENST00000335440 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
PDE9A-203ENST00000335440 CPS1P31327 1500 aa24.78■■□□□ 1.56
PDE9A-203ENST00000335440 NKTRP30414 1462 aaKnown RBP24.78■■□□□ 1.56
PDE9A-203ENST00000335440 CARD11Q9BXL7 1154 aa24.78■■□□□ 1.56
PDE9A-203ENST00000335440 AMOTL2Q9Y2J4 779 aa24.78■■□□□ 1.56
PDE9A-203ENST00000335440 DLC1Q96QB1 1528 aa24.77■■□□□ 1.56
PDE9A-203ENST00000335440 PTCH1Q13635 1447 aa24.76■■□□□ 1.55
PDE9A-203ENST00000335440 ZNF335Q9H4Z2 1342 aaPredicted RBP24.74■■□□□ 1.55
PDE9A-203ENST00000335440 STK26Q9P289 416 aa24.74■■□□□ 1.55
PDE9A-203ENST00000335440 TRAK1Q9UPV9 953 aa24.72■■□□□ 1.55
PDE9A-203ENST00000335440 FAM135BQ49AJ0 1406 aa24.71■■□□□ 1.55
PDE9A-203ENST00000335440 EIF3AQ14152 1382 aaKnown RBP24.71■■□□□ 1.55
PDE9A-203ENST00000335440 SIRT1Q96EB6 747 aa24.7■■□□□ 1.54
PDE9A-203ENST00000335440 ROBO2Q9HCK4 1378 aa24.69■■□□□ 1.54
PDE9A-203ENST00000335440 LTBP4Q8N2S1 1624 aa24.68■■□□□ 1.54
PDE9A-203ENST00000335440 USP47Q96K76 1375 aa24.67■■□□□ 1.54
PDE9A-203ENST00000335440 XIRP1Q702N8 1843 aaKnown RBP24.66■■□□□ 1.54
PDE9A-203ENST00000335440 QRICH2Q9H0J4 1663 aa24.65■■□□□ 1.54
PDE9A-203ENST00000335440 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
PDE9A-203ENST00000335440 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
PDE9A-203ENST00000335440 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
PDE9A-203ENST00000335440 POGKQ9P215 609 aa24.63■■□□□ 1.53
PDE9A-203ENST00000335440 NCOA3Q9Y6Q9 1424 aa24.63■■□□□ 1.53
PDE9A-203ENST00000335440 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
PDE9A-203ENST00000335440 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
PDE9A-203ENST00000335440 PLEKHH1Q9ULM0 1364 aa24.61■■□□□ 1.53
PDE9A-203ENST00000335440 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
PDE9A-203ENST00000335440 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
PDE9A-203ENST00000335440 EIF4G2P78344 907 aaKnown RBP eCLIP24.61■■□□□ 1.53
PDE9A-203ENST00000335440 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
PDE9A-203ENST00000335440 SBNO2Q9Y2G9 1366 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms