RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
PDGFB-201ENST00000331163 WDR43Q15061 677 aaKnown RBP eCLIP21.31■■□□□ 1
PDGFB-201ENST00000331163 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
PDGFB-201ENST00000331163 MORC1Q86VD1 984 aa21.29■■□□□ 1
PDGFB-201ENST00000331163 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
PDGFB-201ENST00000331163 MLH3Q9UHC1 1453 aa21.27■■□□□ 1
PDGFB-201ENST00000331163 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
PDGFB-201ENST00000331163 GGNBP2Q9H3C7 697 aa21.26■□□□□ 0.99
PDGFB-201ENST00000331163 NCKAP5LQ9HCH0 1330 aa21.25■□□□□ 0.99
PDGFB-201ENST00000331163 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
PDGFB-201ENST00000331163 THEMISQ8N1K5 641 aaPredicted RBP21.25■□□□□ 0.99
PDGFB-201ENST00000331163 DISP3Q9P2K9 1392 aa21.25■□□□□ 0.99
PDGFB-201ENST00000331163 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
PDGFB-201ENST00000331163 FBLN1P23142 703 aa21.23■□□□□ 0.99
PDGFB-201ENST00000331163 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
PDGFB-201ENST00000331163 HECW2Q9P2P5 1572 aa21.23■□□□□ 0.99
PDGFB-201ENST00000331163 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
PDGFB-201ENST00000331163 TNRQ92752 1358 aa21.23■□□□□ 0.99
PDGFB-201ENST00000331163 DIP2BQ9P265 1576 aa21.22■□□□□ 0.99
PDGFB-201ENST00000331163 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
PDGFB-201ENST00000331163 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
PDGFB-201ENST00000331163 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
PDGFB-201ENST00000331163 PRDM15P57071 1507 aaPredicted RBP21.21■□□□□ 0.99
PDGFB-201ENST00000331163 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
PDGFB-201ENST00000331163 CROCC2H7BZ55 1655 aa21.2■□□□□ 0.98
PDGFB-201ENST00000331163 LTKP29376 864 aa21.2■□□□□ 0.98
PDGFB-201ENST00000331163 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
PDGFB-201ENST00000331163 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
PDGFB-201ENST00000331163 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
PDGFB-201ENST00000331163 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDGFB-201ENST00000331163 TESK2Q96S53 571 aa21.17■□□□□ 0.98
PDGFB-201ENST00000331163 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
PDGFB-201ENST00000331163 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
PDGFB-201ENST00000331163 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
PDGFB-201ENST00000331163 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
PDGFB-201ENST00000331163 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
PDGFB-201ENST00000331163 CNTLNQ9NXG0 1405 aa21.14■□□□□ 0.97
PDGFB-201ENST00000331163 ARAP3Q8WWN8 1544 aa21.13■□□□□ 0.97
PDGFB-201ENST00000331163 LTV1Q96GA3 475 aaPredicted RBP21.13■□□□□ 0.97
PDGFB-201ENST00000331163 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
PDGFB-201ENST00000331163 ABCA6Q8N139 1617 aa21.11■□□□□ 0.97
PDGFB-201ENST00000331163 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
PDGFB-201ENST00000331163 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
PDGFB-201ENST00000331163 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
PDGFB-201ENST00000331163 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
PDGFB-201ENST00000331163 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDGFB-201ENST00000331163 RIMS2Q9UQ26 1411 aa21.09■□□□□ 0.97
PDGFB-201ENST00000331163 PROSER2Q86WR7 435 aaPredicted RBP21.08■□□□□ 0.97
PDGFB-201ENST00000331163 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
PDGFB-201ENST00000331163 STAC3Q96MF2 364 aa21.08■□□□□ 0.96
PDGFB-201ENST00000331163 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
PDGFB-201ENST00000331163 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
PDGFB-201ENST00000331163 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
PDGFB-201ENST00000331163 DIP2CQ9Y2E4 1556 aa21.07■□□□□ 0.96
PDGFB-201ENST00000331163 ABCC3O15438 1527 aa21.07■□□□□ 0.96
PDGFB-201ENST00000331163 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
PDGFB-201ENST00000331163 NLRP13Q86W25 1043 aa21.06■□□□□ 0.96
PDGFB-201ENST00000331163 NEFMP07197 916 aa21.05■□□□□ 0.96
PDGFB-201ENST00000331163 CEP152O94986 1710 aa21.05■□□□□ 0.96
PDGFB-201ENST00000331163 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
PDGFB-201ENST00000331163 ESCO1Q5FWF5 840 aa21.05■□□□□ 0.96
PDGFB-201ENST00000331163 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
PDGFB-201ENST00000331163 RALGAPBQ86X10 1494 aa21.04■□□□□ 0.96
PDGFB-201ENST00000331163 KCNA6P17658 529 aa21.03■□□□□ 0.96
PDGFB-201ENST00000331163 RALBP1Q15311 655 aa21.03■□□□□ 0.96
PDGFB-201ENST00000331163 A0A0G2JS52 829 aa21.03■□□□□ 0.96
PDGFB-201ENST00000331163 MSH5O43196 834 aa21.02■□□□□ 0.96
PDGFB-201ENST00000331163 CFAP53Q96M91 514 aa21.02■□□□□ 0.96
PDGFB-201ENST00000331163 MYBBP1AQ9BQG0 1328 aaKnown RBP21.02■□□□□ 0.96
PDGFB-201ENST00000331163 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.95
PDGFB-201ENST00000331163 MTHFSP49914 203 aa21.01■□□□□ 0.95
PDGFB-201ENST00000331163 NUDT16Q96DE0 195 aaKnown RBP21.01■□□□□ 0.95
PDGFB-201ENST00000331163 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
PDGFB-201ENST00000331163 E9PCH4 1651 aa21■□□□□ 0.95
PDGFB-201ENST00000331163 PLEKHH1Q9ULM0 1364 aa21■□□□□ 0.95
PDGFB-201ENST00000331163 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
PDGFB-201ENST00000331163 CLTCL1P53675 1640 aa20.99■□□□□ 0.95
PDGFB-201ENST00000331163 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
PDGFB-201ENST00000331163 PTPRTO14522 1441 aa20.99■□□□□ 0.95
PDGFB-201ENST00000331163 RRS1Q15050 365 aaKnown RBP20.98■□□□□ 0.95
PDGFB-201ENST00000331163 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
PDGFB-201ENST00000331163 IQGAP3Q86VI3 1631 aa20.98■□□□□ 0.95
PDGFB-201ENST00000331163 CARD14Q9BXL6 1004 aa20.98■□□□□ 0.95
PDGFB-201ENST00000331163 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 FOXO3O43524 673 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 HMOX1P09601 288 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 PPP2R1AP30153 589 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 PSME1Q06323 249 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 NME9Q86XW9 330 aa20.97■□□□□ 0.95
PDGFB-201ENST00000331163 METP08581 1390 aa20.96■□□□□ 0.95
PDGFB-201ENST00000331163 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
PDGFB-201ENST00000331163 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
PDGFB-201ENST00000331163 KDM5CP41229 1560 aa20.96■□□□□ 0.95
PDGFB-201ENST00000331163 MAP3K4Q9Y6R4 1608 aa20.95■□□□□ 0.95
PDGFB-201ENST00000331163 UNC13BO14795 1591 aa20.95■□□□□ 0.95
PDGFB-201ENST00000331163 PRKCSHP14314 528 aaPredicted RBP20.95■□□□□ 0.94
PDGFB-201ENST00000331163 PPRC1Q5VV67 1664 aaKnown RBP20.95■□□□□ 0.94
PDGFB-201ENST00000331163 APAF1O14727 1248 aa20.95■□□□□ 0.94
PDGFB-201ENST00000331163 NLRP6P59044 892 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms