RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.34
EDEM3-201ENST00000318130 GOLGA6L1Q8N7Z2 621 aa17.14■□□□□ 0.33
EDEM3-201ENST00000318130 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
EDEM3-201ENST00000318130 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
EDEM3-201ENST00000318130 APPP05067 770 aa17.13■□□□□ 0.33
EDEM3-201ENST00000318130 PANK3Q9H999 370 aa17.13■□□□□ 0.33
EDEM3-201ENST00000318130 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
EDEM3-201ENST00000318130 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
EDEM3-201ENST00000318130 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
EDEM3-201ENST00000318130 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
EDEM3-201ENST00000318130 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
EDEM3-201ENST00000318130 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
EDEM3-201ENST00000318130 PHF14O94880 888 aa17.12■□□□□ 0.33
EDEM3-201ENST00000318130 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
EDEM3-201ENST00000318130 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
EDEM3-201ENST00000318130 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
EDEM3-201ENST00000318130 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
EDEM3-201ENST00000318130 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
EDEM3-201ENST00000318130 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
EDEM3-201ENST00000318130 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
EDEM3-201ENST00000318130 ST18O60284 1047 aa17.1■□□□□ 0.33
EDEM3-201ENST00000318130 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
EDEM3-201ENST00000318130 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
EDEM3-201ENST00000318130 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
EDEM3-201ENST00000318130 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
EDEM3-201ENST00000318130 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
EDEM3-201ENST00000318130 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
EDEM3-201ENST00000318130 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
EDEM3-201ENST00000318130 HMMRO75330 724 aa17.06■□□□□ 0.32
EDEM3-201ENST00000318130 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
EDEM3-201ENST00000318130 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
EDEM3-201ENST00000318130 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 ST20-MTHFSA0A0A6YYL1 179 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 CHMP4CQ96CF2 233 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
EDEM3-201ENST00000318130 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
EDEM3-201ENST00000318130 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
EDEM3-201ENST00000318130 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
EDEM3-201ENST00000318130 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
EDEM3-201ENST00000318130 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
EDEM3-201ENST00000318130 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
EDEM3-201ENST00000318130 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
EDEM3-201ENST00000318130 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
EDEM3-201ENST00000318130 ZBED9Q6R2W3 1325 aa17.02■□□□□ 0.31
EDEM3-201ENST00000318130 NLRP6P59044 892 aa17.01■□□□□ 0.31
EDEM3-201ENST00000318130 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
EDEM3-201ENST00000318130 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
EDEM3-201ENST00000318130 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
EDEM3-201ENST00000318130 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
EDEM3-201ENST00000318130 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 AFAP1Q8N556 730 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
EDEM3-201ENST00000318130 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 KIF15Q9NS87 1388 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
EDEM3-201ENST00000318130 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
EDEM3-201ENST00000318130 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
EDEM3-201ENST00000318130 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
EDEM3-201ENST00000318130 TPM3P06753 285 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 NESP48681 1621 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 RAPGEF3O95398 923 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 ANKRD45Q5TZF3 282 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 NEXNQ0ZGT2 675 aa16.99■□□□□ 0.31
EDEM3-201ENST00000318130 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
EDEM3-201ENST00000318130 CCAR2Q8N163 923 aaKnown RBP16.98■□□□□ 0.31
EDEM3-201ENST00000318130 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
EDEM3-201ENST00000318130 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
EDEM3-201ENST00000318130 ZNF592Q92610 1267 aa16.97■□□□□ 0.31
EDEM3-201ENST00000318130 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
EDEM3-201ENST00000318130 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
EDEM3-201ENST00000318130 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
EDEM3-201ENST00000318130 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
EDEM3-201ENST00000318130 MCTP1Q6DN14 999 aa16.97■□□□□ 0.31
EDEM3-201ENST00000318130 COG6Q9Y2V7 657 aa16.97■□□□□ 0.31
EDEM3-201ENST00000318130 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
EDEM3-201ENST00000318130 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
EDEM3-201ENST00000318130 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 ATP2B2Q01814 1243 aa16.95■□□□□ 0.3
EDEM3-201ENST00000318130 RIPK4P57078 832 aa16.94■□□□□ 0.3
EDEM3-201ENST00000318130 SETQ01105 290 aaPredicted RBP16.94■□□□□ 0.3
EDEM3-201ENST00000318130 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
EDEM3-201ENST00000318130 BECN2A8MW95 431 aa16.94■□□□□ 0.3
EDEM3-201ENST00000318130 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
EDEM3-201ENST00000318130 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
EDEM3-201ENST00000318130 H3BQV1 296 aa16.93■□□□□ 0.3
EDEM3-201ENST00000318130 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
EDEM3-201ENST00000318130 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
EDEM3-201ENST00000318130 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
EDEM3-201ENST00000318130 GRM1Q13255 1194 aa16.93■□□□□ 0.3
EDEM3-201ENST00000318130 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms