RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 ZFYVE9O95405 1425 aa27.01■■□□□ 1.91
KLHDC4-202ENST00000316853 HDGFP51858 240 aaKnown RBP27.01■■□□□ 1.91
KLHDC4-202ENST00000316853 FOXD1Q16676 465 aa27.01■■□□□ 1.91
KLHDC4-202ENST00000316853 KIF1BO60333 1816 aa27.01■■□□□ 1.91
KLHDC4-202ENST00000316853 RAB3GAP2Q9H2M9 1393 aa27■■□□□ 1.91
KLHDC4-202ENST00000316853 STRCP1A6NGW2 1772 aa27■■□□□ 1.91
KLHDC4-202ENST00000316853 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
KLHDC4-202ENST00000316853 MPHOSPH9Q99550 1183 aa27■■□□□ 1.91
KLHDC4-202ENST00000316853 SLC26A8Q96RN1 970 aa26.98■■□□□ 1.91
KLHDC4-202ENST00000316853 CPS1P31327 1500 aa26.97■■□□□ 1.91
KLHDC4-202ENST00000316853 ZNF326Q5BKZ1 582 aaKnown RBP26.97■■□□□ 1.91
KLHDC4-202ENST00000316853 IQSEC2Q5JU85 1478 aa26.96■■□□□ 1.91
KLHDC4-202ENST00000316853 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.96■■□□□ 1.91
KLHDC4-202ENST00000316853 ACIN1Q9UKV3 1341 aaKnown RBP26.94■■□□□ 1.9
KLHDC4-202ENST00000316853 PLEKHG1Q9ULL1 1385 aa26.93■■□□□ 1.9
KLHDC4-202ENST00000316853 UBAP1LF5GYI3 381 aa26.85■■□□□ 1.89
KLHDC4-202ENST00000316853 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
KLHDC4-202ENST00000316853 CCDC144AA2RUR9 1427 aa26.83■■□□□ 1.89
KLHDC4-202ENST00000316853 NEXMIFQ5QGS0 1516 aa26.83■■□□□ 1.89
KLHDC4-202ENST00000316853 CHD2O14647 1828 aaKnown RBP26.82■■□□□ 1.88
KLHDC4-202ENST00000316853 KCNA6P17658 529 aa26.82■■□□□ 1.88
KLHDC4-202ENST00000316853 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
KLHDC4-202ENST00000316853 TBX22Q9Y458 520 aa26.8■■□□□ 1.88
KLHDC4-202ENST00000316853 ADAMTS13Q76LX8 1427 aa26.8■■□□□ 1.88
KLHDC4-202ENST00000316853 HRCP23327 699 aa26.79■■□□□ 1.88
KLHDC4-202ENST00000316853 DIP2AQ14689 1571 aa26.77■■□□□ 1.88
KLHDC4-202ENST00000316853 PPLO60437 1756 aa26.76■■□□□ 1.88
KLHDC4-202ENST00000316853 NRXN3Q9Y4C0 1643 aa26.76■■□□□ 1.87
KLHDC4-202ENST00000316853 NWD1Q149M9 1564 aa26.76■■□□□ 1.87
KLHDC4-202ENST00000316853 RGL3Q3MIN7 710 aa26.76■■□□□ 1.87
KLHDC4-202ENST00000316853 PROSER2Q86WR7 435 aaPredicted RBP26.76■■□□□ 1.87
KLHDC4-202ENST00000316853 TOM1O60784 492 aa26.75■■□□□ 1.87
KLHDC4-202ENST00000316853 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
KLHDC4-202ENST00000316853 RBM33Q96EV2 1170 aaKnown RBP26.74■■□□□ 1.87
KLHDC4-202ENST00000316853 SETBP1Q9Y6X0 1596 aa26.74■■□□□ 1.87
KLHDC4-202ENST00000316853 RPGRIP1LQ68CZ1 1315 aa26.73■■□□□ 1.87
KLHDC4-202ENST00000316853 VGFO15240 615 aaPredicted RBP26.73■■□□□ 1.87
KLHDC4-202ENST00000316853 PIP4K2BP78356 416 aa26.72■■□□□ 1.87
KLHDC4-202ENST00000316853 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
KLHDC4-202ENST00000316853 NKTRP30414 1462 aaKnown RBP26.71■■□□□ 1.87
KLHDC4-202ENST00000316853 SPATA31E1Q6ZUB1 1445 aa26.7■■□□□ 1.86
KLHDC4-202ENST00000316853 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
KLHDC4-202ENST00000316853 IFT172Q9UG01 1749 aa26.67■■□□□ 1.86
KLHDC4-202ENST00000316853 ALKQ9UM73 1620 aa26.66■■□□□ 1.86
KLHDC4-202ENST00000316853 AMOTL2Q9Y2J4 779 aa26.66■■□□□ 1.86
KLHDC4-202ENST00000316853 PTPRUQ92729 1446 aa26.65■■□□□ 1.86
KLHDC4-202ENST00000316853 ANKRD30BQ9BXX2 1392 aa26.65■■□□□ 1.86
KLHDC4-202ENST00000316853 METP08581 1390 aa26.64■■□□□ 1.86
KLHDC4-202ENST00000316853 SETD1AO15047 1707 aaKnown RBP26.61■■□□□ 1.85
KLHDC4-202ENST00000316853 ADGRF5Q8IZF2 1346 aa26.61■■□□□ 1.85
KLHDC4-202ENST00000316853 C14orf37Q86TY3 774 aa26.6■■□□□ 1.85
KLHDC4-202ENST00000316853 XRN1Q8IZH2 1706 aaKnown RBP26.59■■□□□ 1.85
KLHDC4-202ENST00000316853 MSH6P52701 1360 aa26.58■■□□□ 1.84
KLHDC4-202ENST00000316853 TRIM26Q12899 539 aaPredicted RBP26.56■■□□□ 1.84
KLHDC4-202ENST00000316853 HSPA1LP34931 641 aa26.52■■□□□ 1.84
KLHDC4-202ENST00000316853 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
KLHDC4-202ENST00000316853 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
KLHDC4-202ENST00000316853 PIK3C2GO75747 1445 aa26.48■■□□□ 1.83
KLHDC4-202ENST00000316853 C19orf44Q9H6X5 657 aa26.48■■□□□ 1.83
KLHDC4-202ENST00000316853 KDM2AQ9Y2K7 1162 aa26.47■■□□□ 1.83
KLHDC4-202ENST00000316853 MYOM2P54296 1465 aa26.47■■□□□ 1.83
KLHDC4-202ENST00000316853 DCAF11Q8TEB1 546 aa26.46■■□□□ 1.83
KLHDC4-202ENST00000316853 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
KLHDC4-202ENST00000316853 ROBO1Q9Y6N7 1651 aa26.45■■□□□ 1.82
KLHDC4-202ENST00000316853 ATF3P18847 181 aa26.45■■□□□ 1.82
KLHDC4-202ENST00000316853 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
KLHDC4-202ENST00000316853 STK26Q9P289 416 aa26.44■■□□□ 1.82
KLHDC4-202ENST00000316853 ROBO2Q9HCK4 1378 aa26.43■■□□□ 1.82
KLHDC4-202ENST00000316853 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
KLHDC4-202ENST00000316853 NALCNQ8IZF0 1738 aa26.42■■□□□ 1.82
KLHDC4-202ENST00000316853 FAM135BQ49AJ0 1406 aa26.42■■□□□ 1.82
KLHDC4-202ENST00000316853 CADPS2Q86UW7 1296 aa26.42■■□□□ 1.82
KLHDC4-202ENST00000316853 PTCH1Q13635 1447 aa26.41■■□□□ 1.82
KLHDC4-202ENST00000316853 CFAP70Q5T0N1 1121 aa26.41■■□□□ 1.82
KLHDC4-202ENST00000316853 ASXL1Q8IXJ9 1541 aa26.4■■□□□ 1.82
KLHDC4-202ENST00000316853 LAMC1P11047 1609 aa26.4■■□□□ 1.82
KLHDC4-202ENST00000316853 C14orf93Q9H972 538 aaKnown RBP26.4■■□□□ 1.82
KLHDC4-202ENST00000316853 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
KLHDC4-202ENST00000316853 ADGRL3Q9HAR2 1447 aa26.38■■□□□ 1.81
KLHDC4-202ENST00000316853 LRPPRCP42704 1394 aaKnown RBP26.36■■□□□ 1.81
KLHDC4-202ENST00000316853 PRAG1Q86YV5 1406 aa26.36■■□□□ 1.81
KLHDC4-202ENST00000316853 DCCP43146 1447 aa26.35■■□□□ 1.81
KLHDC4-202ENST00000316853 KNDC1Q76NI1 1749 aa26.35■■□□□ 1.81
KLHDC4-202ENST00000316853 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
KLHDC4-202ENST00000316853 STAC3Q96MF2 364 aa26.33■■□□□ 1.81
KLHDC4-202ENST00000316853 WAPLQ7Z5K2 1190 aa26.32■■□□□ 1.8
KLHDC4-202ENST00000316853 SIN3AQ96ST3 1273 aa26.32■■□□□ 1.8
KLHDC4-202ENST00000316853 ABCC11Q96J66 1382 aa26.32■■□□□ 1.8
KLHDC4-202ENST00000316853 PHLPP1O60346 1717 aa26.31■■□□□ 1.8
KLHDC4-202ENST00000316853 TECPR2O15040 1411 aa26.31■■□□□ 1.8
KLHDC4-202ENST00000316853 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
KLHDC4-202ENST00000316853 MST1RQ04912 1400 aa26.29■■□□□ 1.8
KLHDC4-202ENST00000316853 PLEKHH1Q9ULM0 1364 aa26.27■■□□□ 1.8
KLHDC4-202ENST00000316853 DISP3Q9P2K9 1392 aa26.25■■□□□ 1.79
KLHDC4-202ENST00000316853 BRINP3Q76B58 766 aa26.25■■□□□ 1.79
KLHDC4-202ENST00000316853 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
KLHDC4-202ENST00000316853 TRAK1Q9UPV9 953 aa26.22■■□□□ 1.79
KLHDC4-202ENST00000316853 SAFB2Q14151 953 aaKnown RBP eCLIP26.21■■□□□ 1.79
KLHDC4-202ENST00000316853 L3MBTL2Q969R5 705 aa26.21■■□□□ 1.79
KLHDC4-202ENST00000316853 SIRT1Q96EB6 747 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms