RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.54
CDC42-201ENST00000315554 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.54
CDC42-201ENST00000315554 SPATA31D1Q6ZQQ2 1576 aa11.7□□□□□ -0.54
CDC42-201ENST00000315554 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
CDC42-201ENST00000315554 E9PCH4 1651 aa11.69□□□□□ -0.54
CDC42-201ENST00000315554 PKD2Q13563 968 aa11.69□□□□□ -0.54
CDC42-201ENST00000315554 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
CDC42-201ENST00000315554 SYNMO15061 1565 aa11.67□□□□□ -0.54
CDC42-201ENST00000315554 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
CDC42-201ENST00000315554 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
CDC42-201ENST00000315554 NOS1P29475 1434 aa11.66□□□□□ -0.54
CDC42-201ENST00000315554 MPHOSPH9Q99550 1183 aa11.66□□□□□ -0.54
CDC42-201ENST00000315554 SETD1BQ9UPS6 1966 aaKnown RBP11.66□□□□□ -0.54
CDC42-201ENST00000315554 A2ML1A8K2U0 1454 aa11.66□□□□□ -0.54
CDC42-201ENST00000315554 RPRD2Q5VT52 1461 aaKnown RBP11.66□□□□□ -0.54
CDC42-201ENST00000315554 IDI1Q13907 227 aa11.65□□□□□ -0.54
CDC42-201ENST00000315554 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
CDC42-201ENST00000315554 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
CDC42-201ENST00000315554 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
CDC42-201ENST00000315554 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 PIK3C2BO00750 1634 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
CDC42-201ENST00000315554 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
CDC42-201ENST00000315554 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
CDC42-201ENST00000315554 CLCN6P51797 869 aa11.61□□□□□ -0.55
CDC42-201ENST00000315554 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
CDC42-201ENST00000315554 PTPRTO14522 1441 aa11.6□□□□□ -0.55
CDC42-201ENST00000315554 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
CDC42-201ENST00000315554 HRCP23327 699 aa11.6□□□□□ -0.55
CDC42-201ENST00000315554 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
CDC42-201ENST00000315554 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
CDC42-201ENST00000315554 THEMISQ8N1K5 641 aaPredicted RBP11.59□□□□□ -0.55
CDC42-201ENST00000315554 ADGRB3O60242 1522 aa11.58□□□□□ -0.55
CDC42-201ENST00000315554 TRPM2O94759 1503 aa11.58□□□□□ -0.55
CDC42-201ENST00000315554 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
CDC42-201ENST00000315554 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
CDC42-201ENST00000315554 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
CDC42-201ENST00000315554 STRCQ7RTU9 1775 aa11.57□□□□□ -0.56
CDC42-201ENST00000315554 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
CDC42-201ENST00000315554 LTKP29376 864 aa11.56□□□□□ -0.56
CDC42-201ENST00000315554 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
CDC42-201ENST00000315554 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
CDC42-201ENST00000315554 ZNF326Q5BKZ1 582 aaKnown RBP11.55□□□□□ -0.56
CDC42-201ENST00000315554 TXNDC2Q86VQ3 553 aa11.55□□□□□ -0.56
CDC42-201ENST00000315554 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
CDC42-201ENST00000315554 CCDC144AA2RUR9 1427 aa11.55□□□□□ -0.56
CDC42-201ENST00000315554 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
CDC42-201ENST00000315554 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
CDC42-201ENST00000315554 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
CDC42-201ENST00000315554 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
CDC42-201ENST00000315554 SLIT1O75093 1534 aa11.53□□□□□ -0.56
CDC42-201ENST00000315554 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
CDC42-201ENST00000315554 RGL3Q3MIN7 710 aa11.52□□□□□ -0.56
CDC42-201ENST00000315554 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.56
CDC42-201ENST00000315554 EID1Q9Y6B2 187 aa11.52□□□□□ -0.56
CDC42-201ENST00000315554 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
CDC42-201ENST00000315554 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
CDC42-201ENST00000315554 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
CDC42-201ENST00000315554 KDM5AP29375 1690 aaKnown RBP11.51□□□□□ -0.57
CDC42-201ENST00000315554 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
CDC42-201ENST00000315554 POLR1AO95602 1720 aaPredicted RBP11.51□□□□□ -0.57
CDC42-201ENST00000315554 ZFYVE9O95405 1425 aa11.51□□□□□ -0.57
CDC42-201ENST00000315554 BCANQ96GW7 911 aa11.51□□□□□ -0.57
CDC42-201ENST00000315554 KIF1BO60333 1816 aa11.5□□□□□ -0.57
CDC42-201ENST00000315554 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
CDC42-201ENST00000315554 SLC26A8Q96RN1 970 aa11.48□□□□□ -0.57
CDC42-201ENST00000315554 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
CDC42-201ENST00000315554 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
CDC42-201ENST00000315554 MED14O60244 1454 aa11.48□□□□□ -0.57
CDC42-201ENST00000315554 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
CDC42-201ENST00000315554 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
CDC42-201ENST00000315554 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDC42-201ENST00000315554 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
CDC42-201ENST00000315554 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
CDC42-201ENST00000315554 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
CDC42-201ENST00000315554 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
CDC42-201ENST00000315554 NEUROD1Q13562 356 aa11.46□□□□□ -0.57
CDC42-201ENST00000315554 PLEKHG1Q9ULL1 1385 aa11.45□□□□□ -0.58
CDC42-201ENST00000315554 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
CDC42-201ENST00000315554 ADGRF5Q8IZF2 1346 aa11.44□□□□□ -0.58
CDC42-201ENST00000315554 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
CDC42-201ENST00000315554 RPGRIP1LQ68CZ1 1315 aa11.43□□□□□ -0.58
CDC42-201ENST00000315554 PPLO60437 1756 aa11.42□□□□□ -0.58
CDC42-201ENST00000315554 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
CDC42-201ENST00000315554 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
CDC42-201ENST00000315554 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
CDC42-201ENST00000315554 NRXN3Q9Y4C0 1643 aa11.4□□□□□ -0.58
CDC42-201ENST00000315554 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
CDC42-201ENST00000315554 LTBP4Q8N2S1 1624 aa11.39□□□□□ -0.59
CDC42-201ENST00000315554 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
CDC42-201ENST00000315554 ZBTB22O15209 634 aa11.38□□□□□ -0.59
CDC42-201ENST00000315554 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
CDC42-201ENST00000315554 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
CDC42-201ENST00000315554 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
CDC42-201ENST00000315554 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
CDC42-201ENST00000315554 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
CDC42-201ENST00000315554 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms