RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 NOL8Q76FK4 1167 aaKnown RBP19.75■□□□□ 0.75
USP42-201ENST00000306177 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
USP42-201ENST00000306177 FOXD4L1Q9NU39 408 aa19.74■□□□□ 0.75
USP42-201ENST00000306177 CCDC34Q96HJ3 373 aa19.74■□□□□ 0.75
USP42-201ENST00000306177 CLSTN1O94985 981 aa19.73■□□□□ 0.75
USP42-201ENST00000306177 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
USP42-201ENST00000306177 KIF16BQ96L93 1317 aa19.73■□□□□ 0.75
USP42-201ENST00000306177 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
USP42-201ENST00000306177 TPM4P67936 248 aa19.72■□□□□ 0.75
USP42-201ENST00000306177 RIPK4P57078 832 aa19.72■□□□□ 0.75
USP42-201ENST00000306177 TMEM132EQ6IEE7 984 aa19.72■□□□□ 0.75
USP42-201ENST00000306177 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
USP42-201ENST00000306177 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
USP42-201ENST00000306177 TIAM1Q13009 1591 aa19.71■□□□□ 0.75
USP42-201ENST00000306177 KIF3AQ9Y496 699 aa19.71■□□□□ 0.75
USP42-201ENST00000306177 RILPL2Q969X0 211 aa19.71■□□□□ 0.75
USP42-201ENST00000306177 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
USP42-201ENST00000306177 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
USP42-201ENST00000306177 API5Q9BZZ5 524 aaKnown RBP19.69■□□□□ 0.74
USP42-201ENST00000306177 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
USP42-201ENST00000306177 DZIP1LQ8IYY4 767 aaKnown RBP19.68■□□□□ 0.74
USP42-201ENST00000306177 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
USP42-201ENST00000306177 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
USP42-201ENST00000306177 HFM1A2PYH4 1435 aa19.67■□□□□ 0.74
USP42-201ENST00000306177 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
USP42-201ENST00000306177 DDX11L8A8MPP1 907 aa19.67■□□□□ 0.74
USP42-201ENST00000306177 FRAT2O75474 233 aaPredicted RBP19.67■□□□□ 0.74
USP42-201ENST00000306177 CABP2Q9NPB3 220 aa19.67■□□□□ 0.74
USP42-201ENST00000306177 TOMM22Q9NS69 142 aa19.67■□□□□ 0.74
USP42-201ENST00000306177 KIAA1107Q9UPP5 1409 aa19.66■□□□□ 0.74
USP42-201ENST00000306177 PHF14O94880 888 aa19.66■□□□□ 0.74
USP42-201ENST00000306177 GGNBP2Q9H3C7 697 aa19.66■□□□□ 0.74
USP42-201ENST00000306177 EVA1CP58658 441 aa19.66■□□□□ 0.74
USP42-201ENST00000306177 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
USP42-201ENST00000306177 PSME1Q06323 249 aa19.65■□□□□ 0.74
USP42-201ENST00000306177 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
USP42-201ENST00000306177 ROCK1Q13464 1354 aa19.65■□□□□ 0.74
USP42-201ENST00000306177 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.74
USP42-201ENST00000306177 G3V3G9 751 aa19.64■□□□□ 0.73
USP42-201ENST00000306177 DCAF8Q5TAQ9 597 aa19.64■□□□□ 0.73
USP42-201ENST00000306177 C9orf78Q9NZ63 289 aaPredicted RBP19.64■□□□□ 0.73
USP42-201ENST00000306177 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
USP42-201ENST00000306177 GNAI1P63096 354 aa19.63■□□□□ 0.73
USP42-201ENST00000306177 CHMP4CQ96CF2 233 aa19.63■□□□□ 0.73
USP42-201ENST00000306177 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
USP42-201ENST00000306177 SCAPERQ9BY12 1400 aa19.62■□□□□ 0.73
USP42-201ENST00000306177 DIAPH3Q9NSV4 1193 aa19.62■□□□□ 0.73
USP42-201ENST00000306177 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
USP42-201ENST00000306177 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
USP42-201ENST00000306177 RASSF8Q8NHQ8 419 aa19.61■□□□□ 0.73
USP42-201ENST00000306177 DAPK1P53355 1430 aa19.61■□□□□ 0.73
USP42-201ENST00000306177 REC8O95072 547 aa19.61■□□□□ 0.73
USP42-201ENST00000306177 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
USP42-201ENST00000306177 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
USP42-201ENST00000306177 SF3A1Q15459 793 aaKnown RBP19.6■□□□□ 0.73
USP42-201ENST00000306177 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
USP42-201ENST00000306177 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
USP42-201ENST00000306177 LRRFIP1Q32MZ4 808 aaKnown RBP19.59■□□□□ 0.73
USP42-201ENST00000306177 ATP6V1DQ9Y5K8 247 aa19.59■□□□□ 0.73
USP42-201ENST00000306177 HMOX1P09601 288 aa19.59■□□□□ 0.73
USP42-201ENST00000306177 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
USP42-201ENST00000306177 FKBP5Q13451 457 aaPredicted RBP19.59■□□□□ 0.73
USP42-201ENST00000306177 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
USP42-201ENST00000306177 H3BQV1 296 aa19.58■□□□□ 0.73
USP42-201ENST00000306177 IFFO2Q5TF58 517 aa19.58■□□□□ 0.73
USP42-201ENST00000306177 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.73
USP42-201ENST00000306177 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.72
USP42-201ENST00000306177 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
USP42-201ENST00000306177 AAMPQ13685 434 aa19.57■□□□□ 0.72
USP42-201ENST00000306177 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
USP42-201ENST00000306177 NECTIN2Q92692 538 aa19.57■□□□□ 0.72
USP42-201ENST00000306177 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
USP42-201ENST00000306177 MTHFSP49914 203 aa19.56■□□□□ 0.72
USP42-201ENST00000306177 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
USP42-201ENST00000306177 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
USP42-201ENST00000306177 SKOR2Q2VWA4 1001 aaPredicted RBP19.56■□□□□ 0.72
USP42-201ENST00000306177 IFIT2P09913 472 aaKnown RBP19.55■□□□□ 0.72
USP42-201ENST00000306177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.55■□□□□ 0.72
USP42-201ENST00000306177 DDX49Q9Y6V7 483 aaKnown RBP19.55■□□□□ 0.72
USP42-201ENST00000306177 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
USP42-201ENST00000306177 IQGAP2Q13576 1575 aa19.54■□□□□ 0.72
USP42-201ENST00000306177 PPP2R1AP30153 589 aa19.53■□□□□ 0.72
USP42-201ENST00000306177 PRAM1Q96QH2 718 aa19.52■□□□□ 0.72
USP42-201ENST00000306177 TXNDC2Q86VQ3 553 aa19.52■□□□□ 0.72
USP42-201ENST00000306177 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
USP42-201ENST00000306177 NLRP6P59044 892 aa19.51■□□□□ 0.71
USP42-201ENST00000306177 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
USP42-201ENST00000306177 ATF3P18847 181 aa19.51■□□□□ 0.71
USP42-201ENST00000306177 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
USP42-201ENST00000306177 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
USP42-201ENST00000306177 RAPGEF3O95398 923 aa19.5■□□□□ 0.71
USP42-201ENST00000306177 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
USP42-201ENST00000306177 PCF11O94913 1555 aaKnown RBP19.5■□□□□ 0.71
USP42-201ENST00000306177 AKAP17AQ02040 695 aaKnown RBP19.5■□□□□ 0.71
USP42-201ENST00000306177 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
USP42-201ENST00000306177 NAIPQ13075 1403 aa19.5■□□□□ 0.71
USP42-201ENST00000306177 SLC52A1Q9NWF4 448 aa19.5■□□□□ 0.71
USP42-201ENST00000306177 CPLX2Q6PUV4 134 aaKnown RBP19.49■□□□□ 0.71
USP42-201ENST00000306177 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
USP42-201ENST00000306177 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms