RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 CHMP5Q9NZZ3 219 aa20.59■□□□□ 0.89
CNTNAP3-201ENST00000297668 A0A0U1RQG5 324 aaPredicted RBP20.59■□□□□ 0.89
CNTNAP3-201ENST00000297668 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
CNTNAP3-201ENST00000297668 RIPK4P57078 832 aa20.59■□□□□ 0.89
CNTNAP3-201ENST00000297668 MARCH6O60337 910 aa20.58■□□□□ 0.89
CNTNAP3-201ENST00000297668 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
CNTNAP3-201ENST00000297668 G3V3G9 751 aa20.57■□□□□ 0.88
CNTNAP3-201ENST00000297668 PES1O00541 588 aaKnown RBP20.57■□□□□ 0.88
CNTNAP3-201ENST00000297668 DCAF8Q5TAQ9 597 aa20.57■□□□□ 0.88
CNTNAP3-201ENST00000297668 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
CNTNAP3-201ENST00000297668 CPLX2Q6PUV4 134 aaKnown RBP20.57■□□□□ 0.88
CNTNAP3-201ENST00000297668 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
CNTNAP3-201ENST00000297668 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
CNTNAP3-201ENST00000297668 MCTP1Q6DN14 999 aa20.56■□□□□ 0.88
CNTNAP3-201ENST00000297668 EIF2S2P20042 333 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-201ENST00000297668 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-201ENST00000297668 PTPRGP23470 1445 aa20.55■□□□□ 0.88
CNTNAP3-201ENST00000297668 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
CNTNAP3-201ENST00000297668 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
CNTNAP3-201ENST00000297668 KIF7Q2M1P5 1343 aa20.54■□□□□ 0.88
CNTNAP3-201ENST00000297668 TSR1Q2NL82 804 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3-201ENST00000297668 CEP89Q96ST8 783 aa20.54■□□□□ 0.88
CNTNAP3-201ENST00000297668 PDE4CQ08493 712 aa20.53■□□□□ 0.88
CNTNAP3-201ENST00000297668 SYNE3Q6ZMZ3 975 aa20.53■□□□□ 0.88
CNTNAP3-201ENST00000297668 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
CNTNAP3-201ENST00000297668 ANO2Q9NQ90 1003 aa20.52■□□□□ 0.88
CNTNAP3-201ENST00000297668 IFIT2P09913 472 aaKnown RBP20.52■□□□□ 0.88
CNTNAP3-201ENST00000297668 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3-201ENST00000297668 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
CNTNAP3-201ENST00000297668 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
CNTNAP3-201ENST00000297668 TPM1P09493 284 aa20.51■□□□□ 0.87
CNTNAP3-201ENST00000297668 TTC5Q8N0Z6 440 aa20.51■□□□□ 0.87
CNTNAP3-201ENST00000297668 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
CNTNAP3-201ENST00000297668 CCAR2Q8N163 923 aaKnown RBP20.5■□□□□ 0.87
CNTNAP3-201ENST00000297668 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
CNTNAP3-201ENST00000297668 LNPKQ9C0E8 428 aa20.49■□□□□ 0.87
CNTNAP3-201ENST00000297668 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
CNTNAP3-201ENST00000297668 GNAI1P63096 354 aa20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 NUCB2P80303 420 aa20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 RNF20Q5VTR2 975 aa20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 AAMPQ13685 434 aa20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 STAC3Q96MF2 364 aa20.48■□□□□ 0.87
CNTNAP3-201ENST00000297668 CPLX1O14810 134 aa20.47■□□□□ 0.87
CNTNAP3-201ENST00000297668 C22orf23Q9BZE7 217 aa20.47■□□□□ 0.87
CNTNAP3-201ENST00000297668 DDX58O95786 925 aaKnown RBP20.46■□□□□ 0.87
CNTNAP3-201ENST00000297668 TRIM29Q14134 588 aa20.46■□□□□ 0.87
CNTNAP3-201ENST00000297668 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
CNTNAP3-201ENST00000297668 FGD6Q6ZV73 1430 aa20.46■□□□□ 0.87
CNTNAP3-201ENST00000297668 CNTLNQ9NXG0 1405 aa20.46■□□□□ 0.87
CNTNAP3-201ENST00000297668 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
CNTNAP3-201ENST00000297668 ZNF592Q92610 1267 aa20.45■□□□□ 0.86
CNTNAP3-201ENST00000297668 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
CNTNAP3-201ENST00000297668 TPM2P07951 284 aa20.44■□□□□ 0.86
CNTNAP3-201ENST00000297668 PANK1Q8TE04 598 aa20.44■□□□□ 0.86
CNTNAP3-201ENST00000297668 SMC3Q9UQE7 1217 aa20.44■□□□□ 0.86
CNTNAP3-201ENST00000297668 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
CNTNAP3-201ENST00000297668 APPP05067 770 aa20.43■□□□□ 0.86
CNTNAP3-201ENST00000297668 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
CNTNAP3-201ENST00000297668 ZNF644Q9H582 1327 aaPredicted RBP20.42■□□□□ 0.86
CNTNAP3-201ENST00000297668 TRDNQ13061 729 aa20.42■□□□□ 0.86
CNTNAP3-201ENST00000297668 GPS2Q13227 327 aa20.42■□□□□ 0.86
CNTNAP3-201ENST00000297668 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
CNTNAP3-201ENST00000297668 IGF1RP08069 1367 aa20.41■□□□□ 0.86
CNTNAP3-201ENST00000297668 IPO7O95373 1038 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3-201ENST00000297668 EVA1CP58658 441 aa20.41■□□□□ 0.86
CNTNAP3-201ENST00000297668 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
CNTNAP3-201ENST00000297668 HMOX1P09601 288 aa20.4■□□□□ 0.86
CNTNAP3-201ENST00000297668 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
CNTNAP3-201ENST00000297668 CCDC70Q6NSX1 233 aa20.4■□□□□ 0.86
CNTNAP3-201ENST00000297668 MIA2Q96PC5 1412 aa20.39■□□□□ 0.86
CNTNAP3-201ENST00000297668 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.85
CNTNAP3-201ENST00000297668 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
CNTNAP3-201ENST00000297668 ERC2O15083 957 aa20.39■□□□□ 0.85
CNTNAP3-201ENST00000297668 ANKRD20A12PQ8NF67 263 aa20.39■□□□□ 0.85
CNTNAP3-201ENST00000297668 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
CNTNAP3-201ENST00000297668 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
CNTNAP3-201ENST00000297668 CDC45O75419 566 aa20.37■□□□□ 0.85
CNTNAP3-201ENST00000297668 AMOTL1Q8IY63 956 aa20.37■□□□□ 0.85
CNTNAP3-201ENST00000297668 FAM43AQ8N2R8 423 aa20.37■□□□□ 0.85
CNTNAP3-201ENST00000297668 HOMER1Q86YM7 354 aa20.37■□□□□ 0.85
CNTNAP3-201ENST00000297668 CCDC47Q96A33 483 aaKnown RBP20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 HOOK1Q9UJC3 728 aaKnown RBP20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 SASS6Q6UVJ0 657 aa20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 NOL10Q9BSC4 688 aaKnown RBP20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.36■□□□□ 0.85
CNTNAP3-201ENST00000297668 PSME1Q06323 249 aa20.35■□□□□ 0.85
CNTNAP3-201ENST00000297668 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
CNTNAP3-201ENST00000297668 CCDC73Q6ZRK6 1079 aa20.35■□□□□ 0.85
CNTNAP3-201ENST00000297668 PCMTD1Q96MG8 357 aaPredicted RBP20.35■□□□□ 0.85
CNTNAP3-201ENST00000297668 TCP11L2Q8N4U5 519 aa20.33■□□□□ 0.85
CNTNAP3-201ENST00000297668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.33■□□□□ 0.85
CNTNAP3-201ENST00000297668 MTHFSP49914 203 aa20.33■□□□□ 0.85
CNTNAP3-201ENST00000297668 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
CNTNAP3-201ENST00000297668 NFXL1Q6ZNB6 911 aa20.33■□□□□ 0.84
CNTNAP3-201ENST00000297668 CUX1P39880 1505 aa20.33■□□□□ 0.84
CNTNAP3-201ENST00000297668 PRM3Q9NNZ6 103 aa20.32■□□□□ 0.84
CNTNAP3-201ENST00000297668 MRE11P49959 708 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms