RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 PCF11O94913 1555 aaKnown RBP5.38□□□□□ -1.55
NCOA1-201ENST00000288599 SLC4A3P48751 1232 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 BIN2Q9UBW5 565 aaPredicted RBP5.38□□□□□ -1.55
NCOA1-201ENST00000288599 AQRO60306 1485 aaKnown RBP eCLIP5.38□□□□□ -1.558e-7■■■■■ 28.7
NCOA1-201ENST00000288599 LRRC9Q6ZRR7 1453 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 KIAA1211Q6ZU35 1233 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 LPXNO60711 386 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 PRPF31Q8WWY3 499 aaKnown RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 URB2Q14146 1524 aaKnown RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 SYTL4Q96C24 671 aaPredicted RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 DNAJC5BQ9UF47 199 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 TOPBP1Q92547 1522 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 APBB1O00213 710 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 DHX37Q8IY37 1157 aaKnown RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 VTI1AQ96AJ9 217 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 TSPYL1Q9H0U9 437 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 BCCIPQ9P287 314 aaKnown RBP eCLIP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 TARBP1Q13395 1621 aaKnown RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 CC2D2AQ9P2K1 1620 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 DNMBPQ6XZF7 1577 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 ANKRD18AQ8IVF6 992 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 TIMELESSQ9UNS1 1208 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 E9PSI1 815 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 HSP90AA2PQ14568 343 aaPredicted RBP5.37□□□□□ -1.55
NCOA1-201ENST00000288599 CCDC70Q6NSX1 233 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 EP400NLQ6ZTU2 488 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
NCOA1-201ENST00000288599 HSP90AB2PQ58FF8 381 aa5.36□□□□□ -1.55
NCOA1-201ENST00000288599 DIAPH3Q9NSV4 1193 aa5.36□□□□□ -1.55
NCOA1-201ENST00000288599 CFAP36Q96G28 342 aa5.36□□□□□ -1.55
NCOA1-201ENST00000288599 SLU7O95391 586 aaKnown RBP5.36□□□□□ -1.55
NCOA1-201ENST00000288599 NUTM2BA6NNL0 878 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 CHMP4BP1P59074 171 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 NUTM2DQ5VT03 806 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 NUTM2AQ8IVF1 878 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 SCLT1Q96NL6 688 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 SSX2IPQ9Y2D8 614 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 NESP48681 1621 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 SYNE3Q6ZMZ3 975 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 FEZ1Q99689 392 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 DDX23Q9BUQ8 820 aaKnown RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 FOXD4L1Q9NU39 408 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 STK24Q9Y6E0 443 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 XPCQ01831 940 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 CCDC173Q0VFZ6 552 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 FRAT1Q92837 279 aaPredicted RBP5.35□□□□□ -1.55
NCOA1-201ENST00000288599 CLEC11AQ9Y240 323 aa5.35□□□□□ -1.55
NCOA1-201ENST00000288599 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.55
NCOA1-201ENST00000288599 RUFY2Q8WXA3 655 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 NEXNQ0ZGT2 675 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 ZNF771Q7L3S4 317 aaPredicted RBP5.34□□□□□ -1.55
NCOA1-201ENST00000288599 AIDAQ96BJ3 306 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 ZNHIT6Q9NWK9 470 aaKnown RBP5.34□□□□□ -1.55
NCOA1-201ENST00000288599 CCAR2Q8N163 923 aaKnown RBP5.34□□□□□ -1.55
NCOA1-201ENST00000288599 COMMD10Q9Y6G5 202 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 PCMTD1Q96MG8 357 aaPredicted RBP5.34□□□□□ -1.55
NCOA1-201ENST00000288599 PLCD4Q9BRC7 762 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 CCNB3Q8WWL7 1395 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 GRIN2BQ13224 1484 aa5.34□□□□□ -1.55
NCOA1-201ENST00000288599 RAD54L2Q9Y4B4 1467 aa5.34□□□□□ -1.56
NCOA1-201ENST00000288599 CDCA8Q53HL2 280 aa5.34□□□□□ -1.56
NCOA1-201ENST00000288599 PODXL2Q9NZ53 605 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 CDR1P51861 262 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 PDILTQ8N807 584 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 TPM1P09493 284 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 MAPK8IP2Q13387 824 aaPredicted RBP5.33□□□□□ -1.56
NCOA1-201ENST00000288599 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 FANCD2Q9BXW9 1451 aa5.33□□□□□ -1.56
NCOA1-201ENST00000288599 SEPT10Q9P0V9 454 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 EFCAB5A4FU69 1503 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 EZRP15311 586 aaKnown RBP5.32□□□□□ -1.56
NCOA1-201ENST00000288599 ATP6V1E1P36543 226 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 WDR78Q5VTH9 848 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 CIZ1Q9ULV3 898 aaPredicted RBP5.32□□□□□ -1.56
NCOA1-201ENST00000288599 RIOK3O14730 519 aaKnown RBP5.32□□□□□ -1.56
NCOA1-201ENST00000288599 B4GALNT3Q6L9W6 998 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 HSCBQ8IWL3 235 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 CARMIL1Q5VZK9 1371 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 TONSLQ96HA7 1378 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 CASKIN1Q8WXD9 1431 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 FYCO1Q9BQS8 1478 aa5.32□□□□□ -1.56
NCOA1-201ENST00000288599 HMGB3O15347 200 aaKnown RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 EPS15P42566 896 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 FOXD4L5Q5VV16 416 aaPredicted RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 FOXD4L4Q8WXT5 416 aaPredicted RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 ZHX3Q9H4I2 956 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 CTTNBP2Q8WZ74 1663 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 RAB3GAP2Q9H2M9 1393 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 SYCP1Q15431 976 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 LRRFIP1Q32MZ4 808 aaKnown RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 GTPBP4Q9BZE4 634 aaKnown RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 PDIA4P13667 645 aaKnown RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 RSPH6AQ9H0K4 717 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 CUL7Q14999 1698 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 KDM6BO15054 1643 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 MS4A1P11836 297 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 NOL8Q76FK4 1167 aaKnown RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 CENPQQ7L2Z9 268 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms