RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 EIF2AK4Q9P2K8 1649 aaKnown RBP19.25■□□□□ 0.67
XRCC1-201ENST00000262887 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
XRCC1-201ENST00000262887 BCAR3O75815 825 aa19.24■□□□□ 0.67
XRCC1-201ENST00000262887 IGHDP01880 384 aa19.24■□□□□ 0.67
XRCC1-201ENST00000262887 MAGI2Q86UL8 1455 aa19.24■□□□□ 0.67
XRCC1-201ENST00000262887 SEC24BO95487 1268 aa19.23■□□□□ 0.67
XRCC1-201ENST00000262887 TRMT2AQ8IZ69 625 aaKnown RBP19.23■□□□□ 0.67
XRCC1-201ENST00000262887 MAGI1Q96QZ7 1491 aaPredicted RBP19.23■□□□□ 0.67
XRCC1-201ENST00000262887 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
XRCC1-201ENST00000262887 MAPK8IP3Q9UPT6 1336 aa19.22■□□□□ 0.67
XRCC1-201ENST00000262887 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
XRCC1-201ENST00000262887 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
XRCC1-201ENST00000262887 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.67
XRCC1-201ENST00000262887 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
XRCC1-201ENST00000262887 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
XRCC1-201ENST00000262887 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
XRCC1-201ENST00000262887 ANTXR1Q9H6X2 564 aa19.2■□□□□ 0.66
XRCC1-201ENST00000262887 NUP160Q12769 1436 aa19.2■□□□□ 0.66
XRCC1-201ENST00000262887 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
XRCC1-201ENST00000262887 MYO5CQ9NQX4 1742 aa19.19■□□□□ 0.66
XRCC1-201ENST00000262887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
XRCC1-201ENST00000262887 SYNJ2O15056 1496 aa19.18■□□□□ 0.66
XRCC1-201ENST00000262887 APAF1O14727 1248 aa19.18■□□□□ 0.66
XRCC1-201ENST00000262887 NLRP1Q9C000 1473 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 E9PSI1 815 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 GOLGA6L3A6NEY3 463 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 CLUAP1Q96AJ1 413 aa19.17■□□□□ 0.66
XRCC1-201ENST00000262887 XRCC6P12956 609 aaKnown RBP eCLIP19.16■□□□□ 0.66
XRCC1-201ENST00000262887 NAP1L5Q96NT1 182 aaPredicted RBP19.16■□□□□ 0.66
XRCC1-201ENST00000262887 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
XRCC1-201ENST00000262887 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
XRCC1-201ENST00000262887 UPF2Q9HAU5 1272 aaKnown RBP19.16■□□□□ 0.66
XRCC1-201ENST00000262887 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
XRCC1-201ENST00000262887 ARXQ96QS3 562 aa19.15■□□□□ 0.66
XRCC1-201ENST00000262887 SLC24A1O60721 1099 aa19.15■□□□□ 0.66
XRCC1-201ENST00000262887 ASXL1Q8IXJ9 1541 aa19.14■□□□□ 0.65
XRCC1-201ENST00000262887 ATP10BO94823 1461 aa19.14■□□□□ 0.65
XRCC1-201ENST00000262887 RNF17Q9BXT8 1623 aaKnown RBP19.14■□□□□ 0.65
XRCC1-201ENST00000262887 FSD2A1L4K1 749 aa19.14■□□□□ 0.65
XRCC1-201ENST00000262887 CLCN1P35523 988 aa19.14■□□□□ 0.65
XRCC1-201ENST00000262887 COG6Q9Y2V7 657 aa19.14■□□□□ 0.65
XRCC1-201ENST00000262887 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
XRCC1-201ENST00000262887 ABCA8O94911 1581 aa19.13■□□□□ 0.65
XRCC1-201ENST00000262887 HSP90AA2PQ14568 343 aaPredicted RBP19.13■□□□□ 0.65
XRCC1-201ENST00000262887 UNC13BO14795 1591 aa19.13■□□□□ 0.65
XRCC1-201ENST00000262887 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
XRCC1-201ENST00000262887 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
XRCC1-201ENST00000262887 SYNMO15061 1565 aa19.12■□□□□ 0.65
XRCC1-201ENST00000262887 PANK1Q8TE04 598 aa19.12■□□□□ 0.65
XRCC1-201ENST00000262887 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
XRCC1-201ENST00000262887 RRP9O43818 475 aaKnown RBP19.11■□□□□ 0.65
XRCC1-201ENST00000262887 TBC1D2Q9BYX2 928 aa19.11■□□□□ 0.65
XRCC1-201ENST00000262887 RSPH4AQ5TD94 716 aa19.1■□□□□ 0.65
XRCC1-201ENST00000262887 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
XRCC1-201ENST00000262887 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
XRCC1-201ENST00000262887 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
XRCC1-201ENST00000262887 HSP90AA1P07900 732 aaKnown RBP19.1■□□□□ 0.65
XRCC1-201ENST00000262887 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
XRCC1-201ENST00000262887 MCM4P33991 863 aa19.09■□□□□ 0.65
XRCC1-201ENST00000262887 PANK2Q9BZ23 570 aa19.09■□□□□ 0.65
XRCC1-201ENST00000262887 GZF1Q9H116 711 aaPredicted RBP19.07■□□□□ 0.64
XRCC1-201ENST00000262887 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
XRCC1-201ENST00000262887 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
XRCC1-201ENST00000262887 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
XRCC1-201ENST00000262887 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
XRCC1-201ENST00000262887 ATP10AO60312 1499 aa19.05■□□□□ 0.64
XRCC1-201ENST00000262887 ZMYM3Q14202 1370 aa19.05■□□□□ 0.64
XRCC1-201ENST00000262887 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
XRCC1-201ENST00000262887 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
XRCC1-201ENST00000262887 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
XRCC1-201ENST00000262887 SYCP2Q9BX26 1530 aa19.03■□□□□ 0.64
XRCC1-201ENST00000262887 MRE11P49959 708 aa19.03■□□□□ 0.64
XRCC1-201ENST00000262887 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
XRCC1-201ENST00000262887 CDC42BPBQ9Y5S2 1711 aa19.03■□□□□ 0.64
XRCC1-201ENST00000262887 TRAK2O60296 914 aa19.02■□□□□ 0.64
XRCC1-201ENST00000262887 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.64
XRCC1-201ENST00000262887 CHD1O14646 1710 aa19.02■□□□□ 0.64
XRCC1-201ENST00000262887 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
XRCC1-201ENST00000262887 WWC1Q8IX03 1113 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 MADDQ8WXG6 1647 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 MYOM1P52179 1685 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 AAMPQ13685 434 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 CHMP5Q9NZZ3 219 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
XRCC1-201ENST00000262887 MAST1Q9Y2H9 1570 aa19■□□□□ 0.63
XRCC1-201ENST00000262887 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
XRCC1-201ENST00000262887 MYH16Q9H6N6 1097 aa18.98■□□□□ 0.63
XRCC1-201ENST00000262887 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
XRCC1-201ENST00000262887 GRPEL1Q9HAV7 217 aa18.97■□□□□ 0.63
XRCC1-201ENST00000262887 ESPNB1AK53 854 aa18.96■□□□□ 0.63
XRCC1-201ENST00000262887 RLBP1P12271 317 aa18.96■□□□□ 0.63
XRCC1-201ENST00000262887 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
XRCC1-201ENST00000262887 TNNQ9UQP3 1299 aa18.95■□□□□ 0.62
XRCC1-201ENST00000262887 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
XRCC1-201ENST00000262887 SCAPERQ9BY12 1400 aa18.95■□□□□ 0.62
XRCC1-201ENST00000262887 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
XRCC1-201ENST00000262887 KDM5AP29375 1690 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms