RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NPHP4O75161 1426 aaPredicted RBP27.48■■□□□ 1.99
CYSTM1-201ENST00000261811 RIMS2Q9UQ26 1411 aa27.47■■□□□ 1.99
CYSTM1-201ENST00000261811 PPP1R15AO75807 674 aaPredicted RBP27.47■■□□□ 1.99
CYSTM1-201ENST00000261811 LTKP29376 864 aa27.44■■□□□ 1.98
CYSTM1-201ENST00000261811 ILDR1Q86SU0 546 aaPredicted RBP27.43■■□□□ 1.98
CYSTM1-201ENST00000261811 ZFYVE9O95405 1425 aa27.43■■□□□ 1.98
CYSTM1-201ENST00000261811 BCANQ96GW7 911 aa27.41■■□□□ 1.98
CYSTM1-201ENST00000261811 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
CYSTM1-201ENST00000261811 ANKRD30BQ9BXX2 1392 aa27.4■■□□□ 1.98
CYSTM1-201ENST00000261811 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
CYSTM1-201ENST00000261811 PPLO60437 1756 aa27.39■■□□□ 1.97
CYSTM1-201ENST00000261811 PLEKHG1Q9ULL1 1385 aa27.37■■□□□ 1.97
CYSTM1-201ENST00000261811 NEXMIFQ5QGS0 1516 aa27.35■■□□□ 1.97
CYSTM1-201ENST00000261811 VGFO15240 615 aaPredicted RBP27.34■■□□□ 1.97
CYSTM1-201ENST00000261811 RGL3Q3MIN7 710 aa27.33■■□□□ 1.97
CYSTM1-201ENST00000261811 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
CYSTM1-201ENST00000261811 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
CYSTM1-201ENST00000261811 IFT172Q9UG01 1749 aa27.32■■□□□ 1.96
CYSTM1-201ENST00000261811 DIP2AQ14689 1571 aa27.3■■□□□ 1.96
CYSTM1-201ENST00000261811 DHX57Q6P158 1386 aaKnown RBP27.28■■□□□ 1.96
CYSTM1-201ENST00000261811 SLC26A8Q96RN1 970 aa27.25■■□□□ 1.95
CYSTM1-201ENST00000261811 ZNF335Q9H4Z2 1342 aaPredicted RBP27.25■■□□□ 1.95
CYSTM1-201ENST00000261811 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
CYSTM1-201ENST00000261811 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
CYSTM1-201ENST00000261811 CHD2O14647 1828 aaKnown RBP27.23■■□□□ 1.95
CYSTM1-201ENST00000261811 CPS1P31327 1500 aa27.23■■□□□ 1.95
CYSTM1-201ENST00000261811 SENP3Q9H4L4 574 aaPredicted RBP27.23■■□□□ 1.95
CYSTM1-201ENST00000261811 LTBP4Q8N2S1 1624 aa27.22■■□□□ 1.95
CYSTM1-201ENST00000261811 STAC3Q96MF2 364 aa27.2■■□□□ 1.95
CYSTM1-201ENST00000261811 NRXN3Q9Y4C0 1643 aa27.2■■□□□ 1.94
CYSTM1-201ENST00000261811 STRCP1A6NGW2 1772 aa27.19■■□□□ 1.94
CYSTM1-201ENST00000261811 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
CYSTM1-201ENST00000261811 CERKQ8TCT0 537 aa27.17■■□□□ 1.94
CYSTM1-201ENST00000261811 ADAMTS13Q76LX8 1427 aa27.17■■□□□ 1.94
CYSTM1-201ENST00000261811 MYOM2P54296 1465 aa27.16■■□□□ 1.94
CYSTM1-201ENST00000261811 KCNA6P17658 529 aa27.16■■□□□ 1.94
CYSTM1-201ENST00000261811 IQSEC2Q5JU85 1478 aa27.13■■□□□ 1.93
CYSTM1-201ENST00000261811 NWD1Q149M9 1564 aa27.13■■□□□ 1.93
CYSTM1-201ENST00000261811 LAMC1P11047 1609 aa27.13■■□□□ 1.93
CYSTM1-201ENST00000261811 ALKQ9UM73 1620 aa27.13■■□□□ 1.93
CYSTM1-201ENST00000261811 DCAF11Q8TEB1 546 aa27.13■■□□□ 1.93
CYSTM1-201ENST00000261811 ADGRF5Q8IZF2 1346 aa27.11■■□□□ 1.93
CYSTM1-201ENST00000261811 NEUROD1Q13562 356 aa27.11■■□□□ 1.93
CYSTM1-201ENST00000261811 SETD1AO15047 1707 aaKnown RBP27.11■■□□□ 1.93
CYSTM1-201ENST00000261811 NKTRP30414 1462 aaKnown RBP27.1■■□□□ 1.93
CYSTM1-201ENST00000261811 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
CYSTM1-201ENST00000261811 KDM2AQ9Y2K7 1162 aa27.09■■□□□ 1.93
CYSTM1-201ENST00000261811 PIK3C2GO75747 1445 aa27.08■■□□□ 1.93
CYSTM1-201ENST00000261811 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
CYSTM1-201ENST00000261811 LRRC7Q96NW7 1537 aa27.04■■□□□ 1.92
CYSTM1-201ENST00000261811 PROSER2Q86WR7 435 aaPredicted RBP27.04■■□□□ 1.92
CYSTM1-201ENST00000261811 AMOTL2Q9Y2J4 779 aa27.04■■□□□ 1.92
CYSTM1-201ENST00000261811 XIRP1Q702N8 1843 aaKnown RBP27.03■■□□□ 1.92
CYSTM1-201ENST00000261811 CLSPNQ9HAW4 1339 aa27.03■■□□□ 1.92
CYSTM1-201ENST00000261811 METP08581 1390 aa27.03■■□□□ 1.92
CYSTM1-201ENST00000261811 XRN1Q8IZH2 1706 aaKnown RBP27.03■■□□□ 1.92
CYSTM1-201ENST00000261811 TONSLQ96HA7 1378 aa26.99■■□□□ 1.91
CYSTM1-201ENST00000261811 C14orf93Q9H972 538 aaKnown RBP26.99■■□□□ 1.91
CYSTM1-201ENST00000261811 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
CYSTM1-201ENST00000261811 FBXO41Q8TF61 875 aa26.98■■□□□ 1.91
CYSTM1-201ENST00000261811 KIAA1210Q9ULL0 1709 aa26.98■■□□□ 1.91
CYSTM1-201ENST00000261811 PTPRUQ92729 1446 aa26.97■■□□□ 1.91
CYSTM1-201ENST00000261811 L3MBTL2Q969R5 705 aa26.96■■□□□ 1.91
CYSTM1-201ENST00000261811 KNDC1Q76NI1 1749 aa26.95■■□□□ 1.9
CYSTM1-201ENST00000261811 NCOA3Q9Y6Q9 1424 aa26.95■■□□□ 1.9
CYSTM1-201ENST00000261811 TMEM94Q12767 1356 aa26.95■■□□□ 1.9
CYSTM1-201ENST00000261811 CFAP70Q5T0N1 1121 aa26.94■■□□□ 1.9
CYSTM1-201ENST00000261811 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
CYSTM1-201ENST00000261811 TOM1O60784 492 aa26.91■■□□□ 1.9
CYSTM1-201ENST00000261811 PTCH1Q13635 1447 aa26.91■■□□□ 1.9
CYSTM1-201ENST00000261811 MSH6P52701 1360 aa26.9■■□□□ 1.9
CYSTM1-201ENST00000261811 PRAG1Q86YV5 1406 aa26.9■■□□□ 1.9
CYSTM1-201ENST00000261811 UBAP1LF5GYI3 381 aa26.9■■□□□ 1.9
CYSTM1-201ENST00000261811 TMEM132EQ6IEE7 984 aa26.9■■□□□ 1.9
CYSTM1-201ENST00000261811 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
CYSTM1-201ENST00000261811 YTHDC2Q9H6S0 1430 aaKnown RBP26.89■■□□□ 1.89
CYSTM1-201ENST00000261811 STK26Q9P289 416 aa26.89■■□□□ 1.89
CYSTM1-201ENST00000261811 ASXL1Q8IXJ9 1541 aa26.87■■□□□ 1.89
CYSTM1-201ENST00000261811 ABCC11Q96J66 1382 aa26.87■■□□□ 1.89
CYSTM1-201ENST00000261811 RBM33Q96EV2 1170 aaKnown RBP26.86■■□□□ 1.89
CYSTM1-201ENST00000261811 TECPR2O15040 1411 aa26.85■■□□□ 1.89
CYSTM1-201ENST00000261811 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.84■■□□□ 1.89
CYSTM1-201ENST00000261811 C19orf44Q9H6X5 657 aa26.84■■□□□ 1.89
CYSTM1-201ENST00000261811 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
CYSTM1-201ENST00000261811 ADGRB1O14514 1584 aa26.83■■□□□ 1.89
CYSTM1-201ENST00000261811 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.88
CYSTM1-201ENST00000261811 SIRT1Q96EB6 747 aa26.82■■□□□ 1.88
CYSTM1-201ENST00000261811 ROBO2Q9HCK4 1378 aa26.81■■□□□ 1.88
CYSTM1-201ENST00000261811 ATF3P18847 181 aa26.81■■□□□ 1.88
CYSTM1-201ENST00000261811 NALCNQ8IZF0 1738 aa26.81■■□□□ 1.88
CYSTM1-201ENST00000261811 FAM135BQ49AJ0 1406 aa26.79■■□□□ 1.88
CYSTM1-201ENST00000261811 DLC1Q96QB1 1528 aa26.79■■□□□ 1.88
CYSTM1-201ENST00000261811 CADPS2Q86UW7 1296 aa26.79■■□□□ 1.88
CYSTM1-201ENST00000261811 DCCP43146 1447 aa26.78■■□□□ 1.88
CYSTM1-201ENST00000261811 ADGRL3Q9HAR2 1447 aa26.78■■□□□ 1.88
CYSTM1-201ENST00000261811 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
CYSTM1-201ENST00000261811 POGKQ9P215 609 aa26.76■■□□□ 1.87
CYSTM1-201ENST00000261811 TRAK1Q9UPV9 953 aa26.75■■□□□ 1.87
CYSTM1-201ENST00000261811 ARHGEF28Q8N1W1 1705 aaKnown RBP26.75■■□□□ 1.87
CYSTM1-201ENST00000261811 PIP4K2BP78356 416 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms