RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 MPHOSPH9Q99550 1183 aa36.19■■■■□ 3.38
SDF2L1-201ENST00000248958 RIMS2Q9UQ26 1411 aa36.18■■■■□ 3.38
SDF2L1-201ENST00000248958 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.18■■■■□ 3.38
SDF2L1-201ENST00000248958 CLTCL1P53675 1640 aa36.18■■■■□ 3.38
SDF2L1-201ENST00000248958 KIF1BO60333 1816 aa36.17■■■■□ 3.38
SDF2L1-201ENST00000248958 CPS1P31327 1500 aa36.16■■■■□ 3.38
SDF2L1-201ENST00000248958 HRCP23327 699 aa36.15■■■■□ 3.38
SDF2L1-201ENST00000248958 PPP1R15AO75807 674 aaPredicted RBP36.11■■■■□ 3.37
SDF2L1-201ENST00000248958 PLEKHG1Q9ULL1 1385 aa36.1■■■■□ 3.37
SDF2L1-201ENST00000248958 FOXD1Q16676 465 aa36.04■■■■□ 3.36
SDF2L1-201ENST00000248958 ZNF326Q5BKZ1 582 aaKnown RBP36.04■■■■□ 3.36
SDF2L1-201ENST00000248958 BCANQ96GW7 911 aa36.04■■■■□ 3.36
SDF2L1-201ENST00000248958 STRCP1A6NGW2 1772 aa36.01■■■■□ 3.35
SDF2L1-201ENST00000248958 CCDC144AA2RUR9 1427 aa36■■■■□ 3.35
SDF2L1-201ENST00000248958 SLC26A8Q96RN1 970 aa35.98■■■■□ 3.35
SDF2L1-201ENST00000248958 DIP2AQ14689 1571 aa35.96■■■■□ 3.35
SDF2L1-201ENST00000248958 NEXMIFQ5QGS0 1516 aa35.95■■■■□ 3.35
SDF2L1-201ENST00000248958 NUTM2DQ5VT03 806 aaPredicted RBP35.95■■■■□ 3.35
SDF2L1-201ENST00000248958 TBX22Q9Y458 520 aa35.94■■■■□ 3.34
SDF2L1-201ENST00000248958 RPGRIP1LQ68CZ1 1315 aa35.93■■■■□ 3.34
SDF2L1-201ENST00000248958 KCNA6P17658 529 aa35.92■■■■□ 3.34
SDF2L1-201ENST00000248958 LRRC7Q96NW7 1537 aa35.89■■■■□ 3.34
SDF2L1-201ENST00000248958 ADAMTS13Q76LX8 1427 aa35.89■■■■□ 3.34
SDF2L1-201ENST00000248958 NWD1Q149M9 1564 aa35.88■■■■□ 3.33
SDF2L1-201ENST00000248958 SETBP1Q9Y6X0 1596 aa35.88■■■■□ 3.33
SDF2L1-201ENST00000248958 CHD2O14647 1828 aaKnown RBP35.87■■■■□ 3.33
SDF2L1-201ENST00000248958 VGFO15240 615 aaPredicted RBP35.86■■■■□ 3.33
SDF2L1-201ENST00000248958 PIK3R4Q99570 1358 aa35.86■■■■□ 3.33
SDF2L1-201ENST00000248958 PPLO60437 1756 aa35.84■■■■□ 3.33
SDF2L1-201ENST00000248958 SENP3Q9H4L4 574 aaPredicted RBP35.84■■■■□ 3.33
SDF2L1-201ENST00000248958 NKTRP30414 1462 aaKnown RBP35.83■■■■□ 3.33
SDF2L1-201ENST00000248958 NRXN3Q9Y4C0 1643 aa35.82■■■■□ 3.32
SDF2L1-201ENST00000248958 SPATA31E1Q6ZUB1 1445 aa35.82■■■■□ 3.32
SDF2L1-201ENST00000248958 UBAP1LF5GYI3 381 aa35.8■■■■□ 3.32
SDF2L1-201ENST00000248958 ANKRD30BQ9BXX2 1392 aa35.77■■■■□ 3.32
SDF2L1-201ENST00000248958 TOM1O60784 492 aa35.77■■■■□ 3.32
SDF2L1-201ENST00000248958 XIRP1Q702N8 1843 aaKnown RBP35.76■■■■□ 3.32
SDF2L1-201ENST00000248958 IFT172Q9UG01 1749 aa35.74■■■■□ 3.31
SDF2L1-201ENST00000248958 RGL3Q3MIN7 710 aa35.74■■■■□ 3.31
SDF2L1-201ENST00000248958 PROSER2Q86WR7 435 aaPredicted RBP35.74■■■■□ 3.31
SDF2L1-201ENST00000248958 TRIM26Q12899 539 aaPredicted RBP35.73■■■■□ 3.31
SDF2L1-201ENST00000248958 TMEM94Q12767 1356 aa35.7■■■■□ 3.31
SDF2L1-201ENST00000248958 NCOA3Q9Y6Q9 1424 aa35.66■■■■□ 3.3
SDF2L1-201ENST00000248958 AMOTL2Q9Y2J4 779 aa35.65■■■■□ 3.3
SDF2L1-201ENST00000248958 PTPRUQ92729 1446 aa35.64■■■■□ 3.3
SDF2L1-201ENST00000248958 ALKQ9UM73 1620 aa35.64■■■■□ 3.3
SDF2L1-201ENST00000248958 SETD1AO15047 1707 aaKnown RBP35.63■■■■□ 3.29
SDF2L1-201ENST00000248958 XRN1Q8IZH2 1706 aaKnown RBP35.63■■■■□ 3.29
SDF2L1-201ENST00000248958 METP08581 1390 aa35.63■■■■□ 3.29
SDF2L1-201ENST00000248958 ADGRF5Q8IZF2 1346 aa35.59■■■■□ 3.29
SDF2L1-201ENST00000248958 MYOM2P54296 1465 aa35.57■■■■□ 3.28
SDF2L1-201ENST00000248958 MSH6P52701 1360 aa35.57■■■■□ 3.28
SDF2L1-201ENST00000248958 DISP3Q9P2K9 1392 aa35.57■■■■□ 3.28
SDF2L1-201ENST00000248958 PIP4K2BP78356 416 aa35.54■■■■□ 3.28
SDF2L1-201ENST00000248958 RBM33Q96EV2 1170 aaKnown RBP35.54■■■■□ 3.28
SDF2L1-201ENST00000248958 SCAF1Q9H7N4 1312 aaKnown RBP35.54■■■■□ 3.28
SDF2L1-201ENST00000248958 PIK3C2GO75747 1445 aa35.53■■■■□ 3.28
SDF2L1-201ENST00000248958 STAC3Q96MF2 364 aa35.52■■■■□ 3.28
SDF2L1-201ENST00000248958 NRXN1Q9ULB1 1477 aa35.5■■■■□ 3.27
SDF2L1-201ENST00000248958 C14orf37Q86TY3 774 aa35.48■■■■□ 3.27
SDF2L1-201ENST00000248958 PRAG1Q86YV5 1406 aa35.48■■■■□ 3.27
SDF2L1-201ENST00000248958 LAMC1P11047 1609 aa35.46■■■■□ 3.27
SDF2L1-201ENST00000248958 C19orf44Q9H6X5 657 aa35.45■■■■□ 3.27
SDF2L1-201ENST00000248958 PTCH1Q13635 1447 aa35.45■■■■□ 3.27
SDF2L1-201ENST00000248958 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.43■■■■□ 3.26
SDF2L1-201ENST00000248958 C14orf93Q9H972 538 aaKnown RBP35.41■■■■□ 3.26
SDF2L1-201ENST00000248958 CADPS2Q86UW7 1296 aa35.4■■■■□ 3.26
SDF2L1-201ENST00000248958 DCAF11Q8TEB1 546 aa35.4■■■■□ 3.26
SDF2L1-201ENST00000248958 FAM135BQ49AJ0 1406 aa35.4■■■■□ 3.26
SDF2L1-201ENST00000248958 ILDR2Q71H61 639 aa35.39■■■■□ 3.26
SDF2L1-201ENST00000248958 DCCP43146 1447 aa35.39■■■■□ 3.26
SDF2L1-201ENST00000248958 ATF3P18847 181 aa35.37■■■■□ 3.25
SDF2L1-201ENST00000248958 DHX57Q6P158 1386 aaKnown RBP35.37■■■■□ 3.25
SDF2L1-201ENST00000248958 KNDC1Q76NI1 1749 aa35.36■■■■□ 3.25
SDF2L1-201ENST00000248958 LRPPRCP42704 1394 aaKnown RBP35.36■■■■□ 3.25
SDF2L1-201ENST00000248958 SLAIN2Q9P270 581 aa35.35■■■■□ 3.25
SDF2L1-201ENST00000248958 KDM2AQ9Y2K7 1162 aa35.35■■■■□ 3.25
SDF2L1-201ENST00000248958 ASXL1Q8IXJ9 1541 aa35.35■■■■□ 3.25
SDF2L1-201ENST00000248958 ROBO2Q9HCK4 1378 aa35.34■■■■□ 3.25
SDF2L1-201ENST00000248958 TECPR2O15040 1411 aa35.33■■■■□ 3.25
SDF2L1-201ENST00000248958 ADGRL3Q9HAR2 1447 aa35.33■■■■□ 3.25
SDF2L1-201ENST00000248958 HSPA1LP34931 641 aa35.33■■■■□ 3.25
SDF2L1-201ENST00000248958 CFAP70Q5T0N1 1121 aa35.33■■■■□ 3.25
SDF2L1-201ENST00000248958 ABCC11Q96J66 1382 aa35.33■■■■□ 3.25
SDF2L1-201ENST00000248958 ROBO1Q9Y6N7 1651 aa35.31■■■■□ 3.24
SDF2L1-201ENST00000248958 TMEM132EQ6IEE7 984 aa35.31■■■■□ 3.24
SDF2L1-201ENST00000248958 NALCNQ8IZF0 1738 aa35.31■■■■□ 3.24
SDF2L1-201ENST00000248958 YTHDC2Q9H6S0 1430 aaKnown RBP35.3■■■■□ 3.24
SDF2L1-201ENST00000248958 STK26Q9P289 416 aa35.27■■■■□ 3.24
SDF2L1-201ENST00000248958 SIRT1Q96EB6 747 aa35.26■■■■□ 3.24
SDF2L1-201ENST00000248958 SIN3AQ96ST3 1273 aa35.2■■■■□ 3.23
SDF2L1-201ENST00000248958 ADGRB1O14514 1584 aa35.2■■■■□ 3.23
SDF2L1-201ENST00000248958 SOCS7O14512 581 aa35.19■■■■□ 3.22
SDF2L1-201ENST00000248958 KIAA1210Q9ULL0 1709 aa35.18■■■■□ 3.22
SDF2L1-201ENST00000248958 MST1RQ04912 1400 aa35.18■■■■□ 3.22
SDF2L1-201ENST00000248958 DLC1Q96QB1 1528 aa35.16■■■■□ 3.22
SDF2L1-201ENST00000248958 NEUROD1Q13562 356 aa35.15■■■■□ 3.22
SDF2L1-201ENST00000248958 WAPLQ7Z5K2 1190 aa35.14■■■■□ 3.22
SDF2L1-201ENST00000248958 CDC42BPGQ6DT37 1551 aa35.13■■■■□ 3.21
SDF2L1-201ENST00000248958 PHLPP1O60346 1717 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms