RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TRIM44Q96DX7 344 aaPredicted RBP18.11■□□□□ 0.49
SHPK-201ENST00000225519 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
SHPK-201ENST00000225519 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
SHPK-201ENST00000225519 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
SHPK-201ENST00000225519 NKTRP30414 1462 aaKnown RBP18.09■□□□□ 0.49
SHPK-201ENST00000225519 ZNF521Q96K83 1311 aa18.09■□□□□ 0.49
SHPK-201ENST00000225519 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
SHPK-201ENST00000225519 TRAK2O60296 914 aa18.09■□□□□ 0.49
SHPK-201ENST00000225519 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
SHPK-201ENST00000225519 CLCN1P35523 988 aa18.08■□□□□ 0.49
SHPK-201ENST00000225519 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
SHPK-201ENST00000225519 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
SHPK-201ENST00000225519 MFAP1P55081 439 aaKnown RBP18.07■□□□□ 0.48
SHPK-201ENST00000225519 RAPGEF6Q8TEU7 1601 aa18.07■□□□□ 0.48
SHPK-201ENST00000225519 ANTXR1Q9H6X2 564 aa18.07■□□□□ 0.48
SHPK-201ENST00000225519 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
SHPK-201ENST00000225519 TBC1D32Q96NH3 1257 aa18.06■□□□□ 0.48
SHPK-201ENST00000225519 CHMP5Q9NZZ3 219 aa18.06■□□□□ 0.48
SHPK-201ENST00000225519 MRE11P49959 708 aa18.06■□□□□ 0.48
SHPK-201ENST00000225519 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
SHPK-201ENST00000225519 RRP9O43818 475 aaKnown RBP18.05■□□□□ 0.48
SHPK-201ENST00000225519 BCL2L13Q9BXK5 485 aa18.05■□□□□ 0.48
SHPK-201ENST00000225519 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
SHPK-201ENST00000225519 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
SHPK-201ENST00000225519 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
SHPK-201ENST00000225519 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
SHPK-201ENST00000225519 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SHPK-201ENST00000225519 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
SHPK-201ENST00000225519 GPRASP1Q5JY77 1395 aa18.02■□□□□ 0.48
SHPK-201ENST00000225519 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
SHPK-201ENST00000225519 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
SHPK-201ENST00000225519 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 ESPNB1AK53 854 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
SHPK-201ENST00000225519 C22orf23Q9BZE7 217 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 GRPEL1Q9HAV7 217 aa18.01■□□□□ 0.47
SHPK-201ENST00000225519 FSD2A1L4K1 749 aa18■□□□□ 0.47
SHPK-201ENST00000225519 DDX11L8A8MPP1 907 aa18■□□□□ 0.47
SHPK-201ENST00000225519 ADAMTS12P58397 1594 aa18■□□□□ 0.47
SHPK-201ENST00000225519 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
SHPK-201ENST00000225519 A2MP01023 1474 aa17.99■□□□□ 0.47
SHPK-201ENST00000225519 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
SHPK-201ENST00000225519 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
SHPK-201ENST00000225519 FTSJ3Q8IY81 847 aaKnown RBP17.97■□□□□ 0.47
SHPK-201ENST00000225519 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
SHPK-201ENST00000225519 MAGI2Q86UL8 1455 aa17.97■□□□□ 0.47
SHPK-201ENST00000225519 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
SHPK-201ENST00000225519 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
SHPK-201ENST00000225519 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
SHPK-201ENST00000225519 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
SHPK-201ENST00000225519 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
SHPK-201ENST00000225519 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SHPK-201ENST00000225519 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
SHPK-201ENST00000225519 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
SHPK-201ENST00000225519 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
SHPK-201ENST00000225519 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
SHPK-201ENST00000225519 PTPRGP23470 1445 aa17.94■□□□□ 0.46
SHPK-201ENST00000225519 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
SHPK-201ENST00000225519 RLBP1P12271 317 aa17.93■□□□□ 0.46
SHPK-201ENST00000225519 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
SHPK-201ENST00000225519 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
SHPK-201ENST00000225519 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
SHPK-201ENST00000225519 PRDM15P57071 1507 aaPredicted RBP17.92■□□□□ 0.46
SHPK-201ENST00000225519 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
SHPK-201ENST00000225519 AAMPQ13685 434 aa17.91■□□□□ 0.46
SHPK-201ENST00000225519 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
SHPK-201ENST00000225519 WDR7Q9Y4E6 1490 aa17.91■□□□□ 0.46
SHPK-201ENST00000225519 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
SHPK-201ENST00000225519 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
SHPK-201ENST00000225519 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
SHPK-201ENST00000225519 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
SHPK-201ENST00000225519 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
SHPK-201ENST00000225519 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
SHPK-201ENST00000225519 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
SHPK-201ENST00000225519 TCP11L2Q8N4U5 519 aa17.87■□□□□ 0.45
SHPK-201ENST00000225519 TPM2P07951 284 aa17.87■□□□□ 0.45
SHPK-201ENST00000225519 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
SHPK-201ENST00000225519 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
SHPK-201ENST00000225519 CCDC141Q6ZP82 1450 aa17.86■□□□□ 0.45
SHPK-201ENST00000225519 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
SHPK-201ENST00000225519 NUP160Q12769 1436 aa17.86■□□□□ 0.45
SHPK-201ENST00000225519 EIF2AK4Q9P2K8 1649 aaKnown RBP17.86■□□□□ 0.45
SHPK-201ENST00000225519 GOLGA6L22H0YM25 854 aa17.85■□□□□ 0.45
SHPK-201ENST00000225519 MSNP26038 577 aaKnown RBP17.85■□□□□ 0.45
SHPK-201ENST00000225519 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
SHPK-201ENST00000225519 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
SHPK-201ENST00000225519 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
SHPK-201ENST00000225519 KIAA1211Q6ZU35 1233 aa17.85■□□□□ 0.45
SHPK-201ENST00000225519 DZIP1LQ8IYY4 767 aaKnown RBP17.85■□□□□ 0.45
SHPK-201ENST00000225519 TNPO1Q92973 898 aaKnown RBP17.84■□□□□ 0.45
SHPK-201ENST00000225519 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
SHPK-201ENST00000225519 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
SHPK-201ENST00000225519 SKOR2Q2VWA4 1001 aaPredicted RBP17.84■□□□□ 0.45
SHPK-201ENST00000225519 CDC42BPAQ5VT25 1732 aa17.83■□□□□ 0.45
SHPK-201ENST00000225519 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
SHPK-201ENST00000225519 ABCC2Q92887 1545 aa17.83■□□□□ 0.44
SHPK-201ENST00000225519 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
SHPK-201ENST00000225519 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms