RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 PPP1R15AO75807 674 aaPredicted RBP21.6■■□□□ 1.05
PCOLCE-201ENST00000223061 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
PCOLCE-201ENST00000223061 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
PCOLCE-201ENST00000223061 HDGFP51858 240 aaKnown RBP21.59■■□□□ 1.05
PCOLCE-201ENST00000223061 BCANQ96GW7 911 aa21.58■■□□□ 1.04
PCOLCE-201ENST00000223061 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
PCOLCE-201ENST00000223061 IQGAP1P46940 1657 aa21.57■■□□□ 1.04
PCOLCE-201ENST00000223061 ANKRD30BQ9BXX2 1392 aa21.56■■□□□ 1.04
PCOLCE-201ENST00000223061 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
PCOLCE-201ENST00000223061 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
PCOLCE-201ENST00000223061 KIF1BO60333 1816 aa21.54■■□□□ 1.04
PCOLCE-201ENST00000223061 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
PCOLCE-201ENST00000223061 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
PCOLCE-201ENST00000223061 SLC26A8Q96RN1 970 aa21.52■■□□□ 1.03
PCOLCE-201ENST00000223061 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
PCOLCE-201ENST00000223061 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
PCOLCE-201ENST00000223061 RPGRIP1LQ68CZ1 1315 aa21.48■■□□□ 1.03
PCOLCE-201ENST00000223061 DHX57Q6P158 1386 aaKnown RBP21.46■■□□□ 1.03
PCOLCE-201ENST00000223061 LTBP4Q8N2S1 1624 aa21.46■■□□□ 1.03
PCOLCE-201ENST00000223061 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
PCOLCE-201ENST00000223061 CERKQ8TCT0 537 aa21.43■■□□□ 1.02
PCOLCE-201ENST00000223061 ADAMTS13Q76LX8 1427 aa21.42■■□□□ 1.02
PCOLCE-201ENST00000223061 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
PCOLCE-201ENST00000223061 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.01
PCOLCE-201ENST00000223061 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
PCOLCE-201ENST00000223061 PPLO60437 1756 aa21.38■■□□□ 1.01
PCOLCE-201ENST00000223061 CPS1P31327 1500 aa21.38■■□□□ 1.01
PCOLCE-201ENST00000223061 KCNA6P17658 529 aa21.37■■□□□ 1.01
PCOLCE-201ENST00000223061 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
PCOLCE-201ENST00000223061 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
PCOLCE-201ENST00000223061 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
PCOLCE-201ENST00000223061 STRCP1A6NGW2 1772 aa21.34■■□□□ 1.01
PCOLCE-201ENST00000223061 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
PCOLCE-201ENST00000223061 DCAF11Q8TEB1 546 aa21.33■■□□□ 1.01
PCOLCE-201ENST00000223061 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
PCOLCE-201ENST00000223061 METP08581 1390 aa21.33■■□□□ 1
PCOLCE-201ENST00000223061 IFT172Q9UG01 1749 aa21.33■■□□□ 1
PCOLCE-201ENST00000223061 PIK3R4Q99570 1358 aa21.32■■□□□ 1
PCOLCE-201ENST00000223061 MYOM2P54296 1465 aa21.31■■□□□ 1
PCOLCE-201ENST00000223061 LRRC7Q96NW7 1537 aa21.31■■□□□ 1
PCOLCE-201ENST00000223061 ALKQ9UM73 1620 aa21.3■■□□□ 1
PCOLCE-201ENST00000223061 NWD1Q149M9 1564 aa21.3■■□□□ 1
PCOLCE-201ENST00000223061 PIK3C2GO75747 1445 aa21.29■■□□□ 1
PCOLCE-201ENST00000223061 PTPRUQ92729 1446 aa21.29■■□□□ 1
PCOLCE-201ENST00000223061 PROSER2Q86WR7 435 aaPredicted RBP21.29■■□□□ 1
PCOLCE-201ENST00000223061 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
PCOLCE-201ENST00000223061 AMOTL2Q9Y2J4 779 aa21.29■■□□□ 1
PCOLCE-201ENST00000223061 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
PCOLCE-201ENST00000223061 IQSEC2Q5JU85 1478 aa21.27■■□□□ 1
PCOLCE-201ENST00000223061 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
PCOLCE-201ENST00000223061 TMEM94Q12767 1356 aa21.26■□□□□ 0.99
PCOLCE-201ENST00000223061 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
PCOLCE-201ENST00000223061 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
PCOLCE-201ENST00000223061 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
PCOLCE-201ENST00000223061 SETD1AO15047 1707 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-201ENST00000223061 TMEM132EQ6IEE7 984 aa21.23■□□□□ 0.99
PCOLCE-201ENST00000223061 L3MBTL2Q969R5 705 aa21.23■□□□□ 0.99
PCOLCE-201ENST00000223061 STAC3Q96MF2 364 aa21.23■□□□□ 0.99
PCOLCE-201ENST00000223061 C14orf93Q9H972 538 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-201ENST00000223061 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
PCOLCE-201ENST00000223061 STK26Q9P289 416 aa21.21■□□□□ 0.99
PCOLCE-201ENST00000223061 XRN1Q8IZH2 1706 aaKnown RBP21.2■□□□□ 0.98
PCOLCE-201ENST00000223061 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
PCOLCE-201ENST00000223061 ASXL1Q8IXJ9 1541 aa21.18■□□□□ 0.98
PCOLCE-201ENST00000223061 ILDR1Q86SU0 546 aaPredicted RBP21.18■□□□□ 0.98
PCOLCE-201ENST00000223061 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
PCOLCE-201ENST00000223061 LRPPRCP42704 1394 aaKnown RBP21.16■□□□□ 0.98
PCOLCE-201ENST00000223061 TONSLQ96HA7 1378 aa21.16■□□□□ 0.98
PCOLCE-201ENST00000223061 ROBO2Q9HCK4 1378 aa21.16■□□□□ 0.98
PCOLCE-201ENST00000223061 LAMC1P11047 1609 aa21.16■□□□□ 0.98
PCOLCE-201ENST00000223061 TOM1O60784 492 aa21.15■□□□□ 0.98
PCOLCE-201ENST00000223061 XIRP1Q702N8 1843 aaKnown RBP21.15■□□□□ 0.98
PCOLCE-201ENST00000223061 MSH6P52701 1360 aa21.14■□□□□ 0.98
PCOLCE-201ENST00000223061 PTCH1Q13635 1447 aa21.14■□□□□ 0.98
PCOLCE-201ENST00000223061 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.98
PCOLCE-201ENST00000223061 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
PCOLCE-201ENST00000223061 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
PCOLCE-201ENST00000223061 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
PCOLCE-201ENST00000223061 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
PCOLCE-201ENST00000223061 ABCC11Q96J66 1382 aa21.12■□□□□ 0.97
PCOLCE-201ENST00000223061 ADGRB1O14514 1584 aa21.1■□□□□ 0.97
PCOLCE-201ENST00000223061 TECPR2O15040 1411 aa21.1■□□□□ 0.97
PCOLCE-201ENST00000223061 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
PCOLCE-201ENST00000223061 C19orf44Q9H6X5 657 aa21.09■□□□□ 0.97
PCOLCE-201ENST00000223061 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
PCOLCE-201ENST00000223061 ATF3P18847 181 aa21.07■□□□□ 0.96
PCOLCE-201ENST00000223061 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
PCOLCE-201ENST00000223061 TRAK1Q9UPV9 953 aa21.07■□□□□ 0.96
PCOLCE-201ENST00000223061 PLEKHH1Q9ULM0 1364 aa21.07■□□□□ 0.96
PCOLCE-201ENST00000223061 ADGRL3Q9HAR2 1447 aa21.06■□□□□ 0.96
PCOLCE-201ENST00000223061 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
PCOLCE-201ENST00000223061 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
PCOLCE-201ENST00000223061 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
PCOLCE-201ENST00000223061 SAFB2Q14151 953 aaKnown RBP eCLIP21.04■□□□□ 0.96
PCOLCE-201ENST00000223061 NBPF8Q3BBV2 869 aa21.04■□□□□ 0.96
PCOLCE-201ENST00000223061 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.03■□□□□ 0.96
PCOLCE-201ENST00000223061 FAM135BQ49AJ0 1406 aa21.03■□□□□ 0.96
PCOLCE-201ENST00000223061 SIRT1Q96EB6 747 aa21.03■□□□□ 0.96
PCOLCE-201ENST00000223061 POGKQ9P215 609 aa21.03■□□□□ 0.96
PCOLCE-201ENST00000223061 SLAIN2Q9P270 581 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms