RNA–Protein interactions for RNA: ENST00000196169.7

TDRD3-201, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-201ENST00000196169 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
TDRD3-201ENST00000196169 PCDHB15Q9Y5E8 787 aa15.34■□□□□ 0.05
TDRD3-201ENST00000196169 BECN1Q14457 450 aa15.33■□□□□ 0.05
TDRD3-201ENST00000196169 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.05
TDRD3-201ENST00000196169 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 PTPRGP23470 1445 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 E9PSI1 815 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
TDRD3-201ENST00000196169 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
TDRD3-201ENST00000196169 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
TDRD3-201ENST00000196169 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
TDRD3-201ENST00000196169 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 ABCC10Q5T3U5 1492 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
TDRD3-201ENST00000196169 CFAP70Q5T0N1 1121 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 CARD14Q9BXL6 1004 aa15.3■□□□□ 0.04
TDRD3-201ENST00000196169 UPF2Q9HAU5 1272 aaKnown RBP15.29■□□□□ 0.04
TDRD3-201ENST00000196169 NKTRP30414 1462 aaKnown RBP15.29■□□□□ 0.04
TDRD3-201ENST00000196169 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
TDRD3-201ENST00000196169 UBE2Q2Q8WVN8 375 aa15.28■□□□□ 0.04
TDRD3-201ENST00000196169 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
TDRD3-201ENST00000196169 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.04
TDRD3-201ENST00000196169 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.03
TDRD3-201ENST00000196169 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.03
TDRD3-201ENST00000196169 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.03
TDRD3-201ENST00000196169 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
TDRD3-201ENST00000196169 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
TDRD3-201ENST00000196169 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
TDRD3-201ENST00000196169 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
TDRD3-201ENST00000196169 PRDM15P57071 1507 aaPredicted RBP15.25■□□□□ 0.03
TDRD3-201ENST00000196169 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
TDRD3-201ENST00000196169 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
TDRD3-201ENST00000196169 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
TDRD3-201ENST00000196169 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
TDRD3-201ENST00000196169 ADCY10Q96PN6 1610 aa15.24■□□□□ 0.03
TDRD3-201ENST00000196169 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
TDRD3-201ENST00000196169 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
TDRD3-201ENST00000196169 SYCP2Q9BX26 1530 aa15.24■□□□□ 0.03
TDRD3-201ENST00000196169 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
TDRD3-201ENST00000196169 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
TDRD3-201ENST00000196169 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
TDRD3-201ENST00000196169 GOLGA6L3A6NEY3 463 aa15.23■□□□□ 0.03
TDRD3-201ENST00000196169 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
TDRD3-201ENST00000196169 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
TDRD3-201ENST00000196169 TBC1D32Q96NH3 1257 aa15.22■□□□□ 0.03
TDRD3-201ENST00000196169 SLC12A5Q9H2X9 1139 aa15.22■□□□□ 0.03
TDRD3-201ENST00000196169 ARHGAP5Q13017 1502 aa15.21■□□□□ 0.03
TDRD3-201ENST00000196169 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.02
TDRD3-201ENST00000196169 MCM4P33991 863 aa15.2■□□□□ 0.02
TDRD3-201ENST00000196169 FTSJ3Q8IY81 847 aaKnown RBP15.2■□□□□ 0.02
TDRD3-201ENST00000196169 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
TDRD3-201ENST00000196169 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
TDRD3-201ENST00000196169 INSRP06213 1382 aa15.2■□□□□ 0.02
TDRD3-201ENST00000196169 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
TDRD3-201ENST00000196169 ASXL1Q8IXJ9 1541 aa15.19■□□□□ 0.02
TDRD3-201ENST00000196169 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
TDRD3-201ENST00000196169 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
TDRD3-201ENST00000196169 TRAK2O60296 914 aa15.18■□□□□ 0.02
TDRD3-201ENST00000196169 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
TDRD3-201ENST00000196169 C22orf23Q9BZE7 217 aa15.18■□□□□ 0.02
TDRD3-201ENST00000196169 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
TDRD3-201ENST00000196169 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
TDRD3-201ENST00000196169 MTHFSP49914 203 aa15.18■□□□□ 0.02
TDRD3-201ENST00000196169 U2AF1L5P0DN76 240 aaPredicted RBP15.17■□□□□ 0.02
TDRD3-201ENST00000196169 U2AF1Q01081 240 aaKnown RBP eCLIP15.17■□□□□ 0.02
TDRD3-201ENST00000196169 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
TDRD3-201ENST00000196169 RWDD1Q9H446 243 aaPredicted RBP15.17■□□□□ 0.02
TDRD3-201ENST00000196169 ABCA8O94911 1581 aa15.17■□□□□ 0.02
TDRD3-201ENST00000196169 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
TDRD3-201ENST00000196169 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
TDRD3-201ENST00000196169 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
TDRD3-201ENST00000196169 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
TDRD3-201ENST00000196169 NLRP1Q9C000 1473 aa15.15■□□□□ 0.02
TDRD3-201ENST00000196169 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
TDRD3-201ENST00000196169 KIF3BO15066 747 aa15.14■□□□□ 0.01
TDRD3-201ENST00000196169 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
TDRD3-201ENST00000196169 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
TDRD3-201ENST00000196169 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
TDRD3-201ENST00000196169 MYO5CQ9NQX4 1742 aa15.13■□□□□ 0.01
TDRD3-201ENST00000196169 LNPKQ9C0E8 428 aa15.12■□□□□ 0.01
TDRD3-201ENST00000196169 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
TDRD3-201ENST00000196169 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
TDRD3-201ENST00000196169 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
TDRD3-201ENST00000196169 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
TDRD3-201ENST00000196169 SPAG9O60271 1321 aaKnown RBP15.11■□□□□ 0.01
TDRD3-201ENST00000196169 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
TDRD3-201ENST00000196169 HSCBQ8IWL3 235 aa15.11■□□□□ 0.01
TDRD3-201ENST00000196169 CDC42BPBQ9Y5S2 1711 aa15.1■□□□□ 0.01
TDRD3-201ENST00000196169 ARHGEF5Q12774 1597 aa15.1■□□□□ 0.01
TDRD3-201ENST00000196169 NUP160Q12769 1436 aa15.1■□□□□ 0.01
TDRD3-201ENST00000196169 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
TDRD3-201ENST00000196169 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
TDRD3-201ENST00000196169 ZKSCAN2Q63HK3 967 aa15.1■□□□□ 0.01
TDRD3-201ENST00000196169 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
TDRD3-201ENST00000196169 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
TDRD3-201ENST00000196169 TRAPPC8Q9Y2L5 1435 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms