RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
SYPL1-201ENST00000011473 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
SYPL1-201ENST00000011473 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
SYPL1-201ENST00000011473 NPHP4O75161 1426 aaPredicted RBP17.6■□□□□ 0.41
SYPL1-201ENST00000011473 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
SYPL1-201ENST00000011473 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
SYPL1-201ENST00000011473 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
SYPL1-201ENST00000011473 KIF1BO60333 1816 aa17.59■□□□□ 0.41
SYPL1-201ENST00000011473 POLR1AO95602 1720 aaPredicted RBP17.59■□□□□ 0.41
SYPL1-201ENST00000011473 BCANQ96GW7 911 aa17.59■□□□□ 0.41
SYPL1-201ENST00000011473 MED14O60244 1454 aa17.57■□□□□ 0.4
SYPL1-201ENST00000011473 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
SYPL1-201ENST00000011473 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
SYPL1-201ENST00000011473 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
SYPL1-201ENST00000011473 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
SYPL1-201ENST00000011473 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYPL1-201ENST00000011473 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
SYPL1-201ENST00000011473 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
SYPL1-201ENST00000011473 PLEKHG1Q9ULL1 1385 aa17.53■□□□□ 0.4
SYPL1-201ENST00000011473 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
SYPL1-201ENST00000011473 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
SYPL1-201ENST00000011473 VGFO15240 615 aaPredicted RBP17.51■□□□□ 0.39
SYPL1-201ENST00000011473 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
SYPL1-201ENST00000011473 DCAF11Q8TEB1 546 aa17.5■□□□□ 0.39
SYPL1-201ENST00000011473 ADAMTS13Q76LX8 1427 aa17.48■□□□□ 0.39
SYPL1-201ENST00000011473 PPLO60437 1756 aa17.47■□□□□ 0.39
SYPL1-201ENST00000011473 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
SYPL1-201ENST00000011473 NRXN3Q9Y4C0 1643 aa17.46■□□□□ 0.38
SYPL1-201ENST00000011473 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
SYPL1-201ENST00000011473 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
SYPL1-201ENST00000011473 SETBP1Q9Y6X0 1596 aa17.44■□□□□ 0.38
SYPL1-201ENST00000011473 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
SYPL1-201ENST00000011473 METP08581 1390 aa17.43■□□□□ 0.38
SYPL1-201ENST00000011473 PIK3C2GO75747 1445 aa17.42■□□□□ 0.38
SYPL1-201ENST00000011473 MYOM2P54296 1465 aa17.42■□□□□ 0.38
SYPL1-201ENST00000011473 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
SYPL1-201ENST00000011473 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
SYPL1-201ENST00000011473 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
SYPL1-201ENST00000011473 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
SYPL1-201ENST00000011473 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
SYPL1-201ENST00000011473 PTPRUQ92729 1446 aa17.39■□□□□ 0.37
SYPL1-201ENST00000011473 KCNA6P17658 529 aa17.39■□□□□ 0.37
SYPL1-201ENST00000011473 TMEM132EQ6IEE7 984 aa17.39■□□□□ 0.37
SYPL1-201ENST00000011473 STRCP1A6NGW2 1772 aa17.39■□□□□ 0.37
SYPL1-201ENST00000011473 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
SYPL1-201ENST00000011473 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
SYPL1-201ENST00000011473 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
SYPL1-201ENST00000011473 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
SYPL1-201ENST00000011473 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
SYPL1-201ENST00000011473 CERKQ8TCT0 537 aa17.35■□□□□ 0.37
SYPL1-201ENST00000011473 STK26Q9P289 416 aa17.35■□□□□ 0.37
SYPL1-201ENST00000011473 SETD1AO15047 1707 aaKnown RBP17.34■□□□□ 0.37
SYPL1-201ENST00000011473 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
SYPL1-201ENST00000011473 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
SYPL1-201ENST00000011473 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.37
SYPL1-201ENST00000011473 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.37
SYPL1-201ENST00000011473 PROSER2Q86WR7 435 aaPredicted RBP17.33■□□□□ 0.36
SYPL1-201ENST00000011473 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
SYPL1-201ENST00000011473 CPS1P31327 1500 aa17.33■□□□□ 0.36
SYPL1-201ENST00000011473 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
SYPL1-201ENST00000011473 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
SYPL1-201ENST00000011473 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
SYPL1-201ENST00000011473 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
SYPL1-201ENST00000011473 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
SYPL1-201ENST00000011473 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
SYPL1-201ENST00000011473 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
SYPL1-201ENST00000011473 XRN1Q8IZH2 1706 aaKnown RBP17.28■□□□□ 0.36
SYPL1-201ENST00000011473 YTHDC2Q9H6S0 1430 aaKnown RBP17.28■□□□□ 0.36
SYPL1-201ENST00000011473 ADGRB1O14514 1584 aa17.27■□□□□ 0.36
SYPL1-201ENST00000011473 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
SYPL1-201ENST00000011473 LAMC1P11047 1609 aa17.26■□□□□ 0.35
SYPL1-201ENST00000011473 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
SYPL1-201ENST00000011473 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
SYPL1-201ENST00000011473 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
SYPL1-201ENST00000011473 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
SYPL1-201ENST00000011473 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
SYPL1-201ENST00000011473 PTCH1Q13635 1447 aa17.23■□□□□ 0.35
SYPL1-201ENST00000011473 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
SYPL1-201ENST00000011473 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
SYPL1-201ENST00000011473 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
SYPL1-201ENST00000011473 TECPR2O15040 1411 aa17.22■□□□□ 0.35
SYPL1-201ENST00000011473 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
SYPL1-201ENST00000011473 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
SYPL1-201ENST00000011473 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
SYPL1-201ENST00000011473 MSH6P52701 1360 aa17.19■□□□□ 0.34
SYPL1-201ENST00000011473 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SYPL1-201ENST00000011473 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
SYPL1-201ENST00000011473 KIAA1210Q9ULL0 1709 aa17.18■□□□□ 0.34
SYPL1-201ENST00000011473 POGKQ9P215 609 aa17.18■□□□□ 0.34
SYPL1-201ENST00000011473 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
SYPL1-201ENST00000011473 C19orf44Q9H6X5 657 aa17.17■□□□□ 0.34
SYPL1-201ENST00000011473 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
SYPL1-201ENST00000011473 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
SYPL1-201ENST00000011473 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
SYPL1-201ENST00000011473 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
SYPL1-201ENST00000011473 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
SYPL1-201ENST00000011473 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
SYPL1-201ENST00000011473 NCOA3Q9Y6Q9 1424 aa17.16■□□□□ 0.34
SYPL1-201ENST00000011473 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
SYPL1-201ENST00000011473 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms