RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Plekhg5Q66T02 1073 aa21.37■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Uggt1Q6P5E4 1551 aa21.35■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Myom2Q14BI5 1463 aa21.34■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Smg6P61406 1418 aaKnown RBP21.33■■□□□ 1
Ldb3-208ENSMUST00000228044 Rsph4aQ8BYM7 716 aa21.31■■□□□ 1
Ldb3-208ENSMUST00000228044 CltcQ68FD5 1675 aaKnown RBP21.31■■□□□ 1
Ldb3-208ENSMUST00000228044 Mroh1E0CZ22 1640 aa21.3■■□□□ 1
Ldb3-208ENSMUST00000228044 Hfm1D3Z4R1 1434 aa21.3■■□□□ 1
Ldb3-208ENSMUST00000228044 Myo3aQ8K3H5 1613 aa21.29■■□□□ 1
Ldb3-208ENSMUST00000228044 Skint5A7XUY5 1461 aa21.29■■□□□ 1
Ldb3-208ENSMUST00000228044 Afap1Q80YS6 731 aa21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 Plxnc1Q9QZC2 1574 aa21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 Cdk5rap2Q8K389 1822 aa21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 Arhgap23Q69ZH9 1483 aa21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 Ahdc1Q6PAL7 1594 aaKnown RBP21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 RictorQ6QI06 1708 aa21.28■■□□□ 1
Ldb3-208ENSMUST00000228044 Kdm2aP59997 1161 aa21.27■■□□□ 1
Ldb3-208ENSMUST00000228044 Pola1P33609 1465 aa21.24■□□□□ 0.99
Ldb3-208ENSMUST00000228044 Adamtsl3G3UXC7 1706 aa21.23■□□□□ 0.99
Ldb3-208ENSMUST00000228044 Dnajc5gQ8C632 165 aa21.23■□□□□ 0.99
Ldb3-208ENSMUST00000228044 Myom1Q62234 1667 aaKnown RBP21.23■□□□□ 0.99
Ldb3-208ENSMUST00000228044 Tubgcp6G5E8P0 1769 aa21.21■□□□□ 0.99
Ldb3-208ENSMUST00000228044 Sipa1l1Q8C0T5 1782 aa21.21■□□□□ 0.99
Ldb3-208ENSMUST00000228044 AU022751B1B0V2 589 aa21.2■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Gm20521D3Z5F7 333 aa21.2■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Srpk2O54781 681 aaKnown RBP21.19■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Srcin1Q9QWI6 1250 aa21.18■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Kif13aQ9EQW7 1749 aa21.18■□□□□ 0.98
Ldb3-208ENSMUST00000228044 DnmbpQ6TXD4 1580 aa21.18■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Os9Q8K2C7 672 aa21.18■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Itsn2Q9Z0R6 1659 aa21.17■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Gm13695A2AK44 830 aa21.16■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Zbtb4Q5F293 982 aa21.16■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Nphp4P59240 1425 aa21.16■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Itsn1Q9Z0R4 1714 aa21.16■□□□□ 0.98
Ldb3-208ENSMUST00000228044 PtprmP28828 1452 aa21.15■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Fan1Q69ZT1 1020 aa21.15■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Prrc2bQ7TPM1 1486 aaKnown RBP21.14■□□□□ 0.98
Ldb3-208ENSMUST00000228044 Dnajc5P60904 198 aa21.14■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Stard8Q8K031 1019 aa21.14■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Puf60Q3UEB3 564 aaKnown RBP21.11■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Usp40Q8BWR4 1235 aa21.11■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Slc24a1Q91WD8 1130 aa21.1■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Med14A2ABV5 1459 aaKnown RBP21.1■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Slc52a2Q9D8F3 450 aa21.09■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Ift172Q6VH22 1749 aa21.09■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Naip7Q9JIB3 1402 aa21.09■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Gtf2e1Q9D0D5 440 aa21.09■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Sbno1Q689Z5 1390 aa21.09■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Ercc6l2Q9JIM3 1537 aa21.08■□□□□ 0.97
Ldb3-208ENSMUST00000228044 Lrrc7Q80TE7 1490 aa21.08■□□□□ 0.96
Ldb3-208ENSMUST00000228044 PalldQ9ET54 1408 aa21.06■□□□□ 0.96
Ldb3-208ENSMUST00000228044 PrxO55103 1391 aa21.05■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Arhgef28P97433 1693 aa21.03■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Kdm5aQ3UXZ9 1690 aa21.03■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Zc3h13E9Q784 1729 aaKnown RBP21.03■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Pcdh10E9PXQ7 1057 aa21.03■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Plppr3Q7TPB0 716 aa21.02■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Exoc6Q8R313 802 aa21.02■□□□□ 0.96
Ldb3-208ENSMUST00000228044 Stra8P70278 393 aa21.01■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Wwc2Q6NXJ0 1187 aa21.01■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Pank3Q8R2W9 370 aa21■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Chd2E9PZM4 1827 aaKnown RBP20.99■□□□□ 0.95
Ldb3-208ENSMUST00000228044 MaddQ80U28 1577 aa20.99■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Eif2ak4Q9QZ05 1648 aa20.98■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Mrs2Q5NCE8 434 aa20.98■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Anks4bQ8K3X6 423 aa20.98■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Arid4bA2CG63 1314 aaKnown RBP20.97■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Tmf1B9EKI3 1091 aa20.97■□□□□ 0.95
Ldb3-208ENSMUST00000228044 PplQ9R269 1755 aa20.97■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Gm16486A0A1D5RMD1 1434 aa20.96■□□□□ 0.95
Ldb3-208ENSMUST00000228044 PnisrA2AJT4 805 aaKnown RBP20.96■□□□□ 0.95
Ldb3-208ENSMUST00000228044 Shq1Q7TMX5 569 aa20.95■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Slc4a1apE9PX68 744 aa20.94■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Safb2Q80YR5 991 aaKnown RBP20.94■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Inpp5dQ9ES52 1191 aa20.94■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Stag3O70576 1240 aa20.94■□□□□ 0.94
Ldb3-208ENSMUST00000228044 IqubQ8CDK3 788 aa20.94■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Dip2bQ3UH60 1574 aa20.93■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Gemin5Q8BX17 1502 aaKnown RBP20.93■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Zscan10Q3URR7 782 aa20.92■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Slc4a2P13808 1237 aaKnown RBP20.92■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Fam184bQ0KK56 942 aa20.92■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Atp1b4Q99ME6 356 aa20.92■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Dip2aQ8BWT5 1523 aa20.9■□□□□ 0.94
Ldb3-208ENSMUST00000228044 Cep170bQ80U49 1574 aa20.89■□□□□ 0.93
Ldb3-208ENSMUST00000228044 Q9D9H8 365 aa20.88■□□□□ 0.93
Ldb3-208ENSMUST00000228044 InsrP15208 1372 aa20.88■□□□□ 0.93
Ldb3-208ENSMUST00000228044 P3h3Q8CG70 732 aa20.87■□□□□ 0.93
Ldb3-208ENSMUST00000228044 Stk26Q99JT2 416 aa20.87■□□□□ 0.93
Ldb3-208ENSMUST00000228044 CenpjQ569L8 1344 aa20.86■□□□□ 0.93
Ldb3-208ENSMUST00000228044 NrdcQ8BHG1 1161 aa20.85■□□□□ 0.93
Ldb3-208ENSMUST00000228044 Plekhg1F6S200 1446 aa20.84■□□□□ 0.93
Ldb3-208ENSMUST00000228044 Znf710Q3U288 666 aa20.84■□□□□ 0.93
Ldb3-208ENSMUST00000228044 Anp32bQ9EST5 272 aaKnown RBP20.82■□□□□ 0.92
Ldb3-208ENSMUST00000228044 Txndc2Q6P902 515 aa20.81■□□□□ 0.92
Ldb3-208ENSMUST00000228044 Abca14E9Q8F8 1683 aa20.81■□□□□ 0.92
Ldb3-208ENSMUST00000228044 Psme1P97371 249 aa20.8■□□□□ 0.92
Ldb3-208ENSMUST00000228044 Slit3Q9WVB4 1523 aa20.79■□□□□ 0.92
Ldb3-208ENSMUST00000228044 Utp14aQ640M1 767 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms