RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Pde4cQ3UEI1 686 aa16.52■□□□□ 0.23
Rnf40-202ENSMUST00000205694 GorabQ8BRM2 368 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 MsnP26041 577 aaKnown RBP16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Usp47Q8BY87 1376 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Atp6v1dP57746 247 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Ncapd3Q6ZQK0 1506 aa16.5■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Pibf1E9Q6K3 756 aa16.5■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Ap3b2Q9JME5 1082 aa16.49■□□□□ 0.23
Rnf40-202ENSMUST00000205694 ErbinQ80TH2 1402 aa16.49■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Tsen2Q6P7W5 460 aa16.48■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Stk31Q99MW1 1018 aa16.48■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Cgnl1Q6AW69 1298 aa16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Erich3F6QRE9 1637 aa16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 CrebrfQ8CDG5 640 aaKnown RBP16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 OvosQ3UU35 1456 aa16.46■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Abca5Q8K448 1642 aa16.46■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Senp3Q9EP97 568 aaKnown RBP16.46■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Arhgef12Q8R4H2 1543 aaKnown RBP16.45■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Ncoa3O09000 1398 aa16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 RdxP26043 583 aaKnown RBP16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Wdr7Q920I9 1489 aa16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Eif4g1Q6NZJ6 1600 aaKnown RBP16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Pank3Q8R2W9 370 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Tnnt2P50752 301 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 BC005561E9Q5E2 1589 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cd109Q8R422 1442 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cald1E9QA15 768 aaKnown RBP16.42■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Adamts12Q811B3 1600 aa16.42■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Abcc5Q9R1X5 1436 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Rrbp1Q99PL5 1605 aaKnown RBP16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Ccdc146E9Q9F7 977 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cabp4Q8VHC5 271 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Gm1043A0A140LJC2 1431 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Pak3Q61036 559 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Naip2Q9QUK4 1447 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Slc4a10Q5DTL9 1118 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccer1Q9CQL2 403 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rfx7F8VPJ6 1459 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Peg3Q3URU2 1571 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccdc60Q8C4J0 545 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Prex2Q3LAC4 1598 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Cspp1B2RX88 1205 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Zfp644E9QA22 1323 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccdc47Q9D024 483 aaKnown RBP16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 GsdmaQ9EST1 446 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Smc4Q8CG47 1286 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rab11fip3Q8CHD8 1047 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rock1P70335 1354 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Fam184bQ0KK56 942 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Usp40Q8BWR4 1235 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Inpp5dQ9ES52 1191 aa16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rrp12Q6P5B0 1295 aaKnown RBP16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ylpm1Q9R0I7 1386 aaKnown RBP16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Mapkbp1Q6NS57 1503 aa16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 G3bp1P97855 465 aaKnown RBP16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Shq1Q7TMX5 569 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ttll5Q8CHB8 1328 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ralbp1Q62172 648 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Smg6P61406 1418 aaKnown RBP16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Adgrl3Q80TS3 1537 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Tpm3P21107 285 aaKnown RBP16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rsph3aQ3UFY4 516 aa16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Afap1Q80YS6 731 aa16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Map3k4O08648 1597 aa16.33■□□□□ 0.2
Rnf40-202ENSMUST00000205694 St18Q80TY4 1045 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Abca16E9PWJ7 1678 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 SlkO54988 1233 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Tpd52l1O54818 204 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Kiaa0754Q69ZZ9 979 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Kif7B7ZNG0 1348 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Ddrgk1Q80WW9 315 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AI481877A2ALV5 1481 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Cfap74Q3UY96 1578 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 4933402E13RikQ9D4D2 429 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Sf3a1Q8K4Z5 791 aaKnown RBP16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Filip1lQ6P6L0 1131 aa16.3■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Cplx2P84086 134 aa16.3■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Mink1Q9JM52 1308 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AampJ3QN89 436 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 ChgaP26339 463 aaKnown RBP16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Gm21969J3QJZ1 289 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AppP12023 770 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Glipr1l2Q9CQ35 332 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Trim30aP15533 496 aa16.27■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Nap1l3Q794H2 544 aa16.27■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Becn1O88597 448 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Zscan10Q3URR7 782 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Chmp7Q8R1T1 451 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Mical1Q8VDP3 1048 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Sh3bgrQ9WUZ7 214 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Dapk1Q80YE7 1442 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Ciz1Q8VEH2 845 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Gm21190A0A0G2JGJ6 266 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Gpatch11Q3UFS4 262 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Vps53Q8CCB4 832 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Lmo7E9PYF4 1699 aaKnown RBP16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Evc2Q8K1G2 1220 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Isy1Q69ZQ2 285 aaKnown RBP16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Tceal9Q9DD24 104 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Trim58Q5NCC9 485 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms