RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 AatkQ80YE4 1365 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Zbtb4Q5F293 982 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Tecpr2Q3UH45 1423 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Myom2Q14BI5 1463 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Adamts13Q769J6 1426 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Adgrb3Q80ZF8 1522 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 CltcQ68FD5 1675 aaKnown RBP10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Abca8aQ8K442 1620 aa10.42□□□□□ -0.74
Usp40-204ENSMUST00000187758 Ino80Q6ZPV2 1559 aa10.41□□□□□ -0.74
Usp40-204ENSMUST00000187758 Ncoa1P70365 1447 aa10.4□□□□□ -0.74
Usp40-204ENSMUST00000187758 Skint5A7XUY5 1461 aa10.4□□□□□ -0.74
Usp40-204ENSMUST00000187758 Slc24a1Q91WD8 1130 aa10.4□□□□□ -0.75
Usp40-204ENSMUST00000187758 Atp1b4Q99ME6 356 aa10.39□□□□□ -0.75
Usp40-204ENSMUST00000187758 Ehbp1l1Q99MS7 1716 aa10.39□□□□□ -0.75
Usp40-204ENSMUST00000187758 Rock2P70336 1388 aa10.39□□□□□ -0.75
Usp40-204ENSMUST00000187758 Fan1Q69ZT1 1020 aa10.38□□□□□ -0.75
Usp40-204ENSMUST00000187758 Uggt1Q6P5E4 1551 aa10.37□□□□□ -0.75
Usp40-204ENSMUST00000187758 Ahdc1Q6PAL7 1594 aaKnown RBP10.37□□□□□ -0.75
Usp40-204ENSMUST00000187758 Srcin1Q9QWI6 1250 aa10.36□□□□□ -0.75
Usp40-204ENSMUST00000187758 Cep152A2AUM9 1736 aaKnown RBP10.36□□□□□ -0.75
Usp40-204ENSMUST00000187758 Rims1Q99NE5 1463 aa10.36□□□□□ -0.75
Usp40-204ENSMUST00000187758 Prdm2A2A7B5 1709 aaKnown RBP10.36□□□□□ -0.75
Usp40-204ENSMUST00000187758 P3h3Q8CG70 732 aa10.36□□□□□ -0.75
Usp40-204ENSMUST00000187758 RictorQ6QI06 1708 aa10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Arhgap23Q69ZH9 1483 aa10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Stard8Q8K031 1019 aa10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Mroh1E0CZ22 1640 aa10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Prrc2bQ7TPM1 1486 aaKnown RBP10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Adamtsl3G3UXC7 1706 aa10.35□□□□□ -0.75
Usp40-204ENSMUST00000187758 Gtf2e1Q9D0D5 440 aa10.34□□□□□ -0.75
Usp40-204ENSMUST00000187758 Puf60Q3UEB3 564 aaKnown RBP10.34□□□□□ -0.75
Usp40-204ENSMUST00000187758 Myo3aQ8K3H5 1613 aa10.34□□□□□ -0.75
Usp40-204ENSMUST00000187758 MyclP10166 368 aa10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 Usp40Q8BWR4 1235 aa10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 Gm13695A2AK44 830 aa10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 Nop58Q6DFW4 536 aaKnown RBP10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 AU022751B1B0V2 589 aa10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 Slc52a2Q9D8F3 450 aa10.33□□□□□ -0.76
Usp40-204ENSMUST00000187758 Plekhg5Q66T02 1073 aa10.32□□□□□ -0.76
Usp40-204ENSMUST00000187758 MlecQ6ZQI3 291 aaKnown RBP10.32□□□□□ -0.76
Usp40-204ENSMUST00000187758 IqubQ8CDK3 788 aa10.32□□□□□ -0.76
Usp40-204ENSMUST00000187758 Plxnc1Q9QZC2 1574 aa10.32□□□□□ -0.76
Usp40-204ENSMUST00000187758 Shq1Q7TMX5 569 aa10.32□□□□□ -0.76
Usp40-204ENSMUST00000187758 Txndc2Q6P902 515 aa10.31□□□□□ -0.76
Usp40-204ENSMUST00000187758 Naip7Q9JIB3 1402 aa10.31□□□□□ -0.76
Usp40-204ENSMUST00000187758 Ercc6l2Q9JIM3 1537 aa10.31□□□□□ -0.76
Usp40-204ENSMUST00000187758 Stag3O70576 1240 aa10.3□□□□□ -0.76
Usp40-204ENSMUST00000187758 Psme1P97371 249 aa10.3□□□□□ -0.76
Usp40-204ENSMUST00000187758 Med14A2ABV5 1459 aaKnown RBP10.29□□□□□ -0.76
Usp40-204ENSMUST00000187758 PtprmP28828 1452 aa10.29□□□□□ -0.76
Usp40-204ENSMUST00000187758 Kif13aQ9EQW7 1749 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Stk26Q99JT2 416 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Nphp4P59240 1425 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Lrrc7Q80TE7 1490 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Setd1aE9PYH6 1716 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Q9D9H8 365 aa10.28□□□□□ -0.76
Usp40-204ENSMUST00000187758 Smg6P61406 1418 aaKnown RBP10.27□□□□□ -0.76
Usp40-204ENSMUST00000187758 Cdk5rap2Q8K389 1822 aa10.27□□□□□ -0.77
Usp40-204ENSMUST00000187758 Itsn1Q9Z0R4 1714 aa10.26□□□□□ -0.77
Usp40-204ENSMUST00000187758 DiexfQ8BTT6 772 aaKnown RBP10.26□□□□□ -0.77
Usp40-204ENSMUST00000187758 PalldQ9ET54 1408 aa10.26□□□□□ -0.77
Usp40-204ENSMUST00000187758 Myom1Q62234 1667 aaKnown RBP10.25□□□□□ -0.77
Usp40-204ENSMUST00000187758 Utp14aQ640M1 767 aaKnown RBP10.25□□□□□ -0.77
Usp40-204ENSMUST00000187758 Pola1P33609 1465 aa10.24□□□□□ -0.77
Usp40-204ENSMUST00000187758 Arid4bA2CG63 1314 aaKnown RBP10.24□□□□□ -0.77
Usp40-204ENSMUST00000187758 Tmf1B9EKI3 1091 aa10.24□□□□□ -0.77
Usp40-204ENSMUST00000187758 CenpjQ569L8 1344 aa10.23□□□□□ -0.77
Usp40-204ENSMUST00000187758 Slc4a1apE9PX68 744 aa10.23□□□□□ -0.77
Usp40-204ENSMUST00000187758 Anp32bQ9EST5 272 aaKnown RBP10.23□□□□□ -0.77
Usp40-204ENSMUST00000187758 Pank3Q8R2W9 370 aa10.23□□□□□ -0.77
Usp40-204ENSMUST00000187758 Zc3h13E9Q784 1729 aaKnown RBP10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 Itsn2Q9Z0R6 1659 aa10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 DnmbpQ6TXD4 1580 aa10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 Arhgef28P97433 1693 aa10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 Dip2bQ3UH60 1574 aa10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 Stra8P70278 393 aa10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 GphnQ8BUV3 769 aaKnown RBP10.22□□□□□ -0.77
Usp40-204ENSMUST00000187758 PrxO55103 1391 aa10.21□□□□□ -0.77
Usp40-204ENSMUST00000187758 Kdm5aQ3UXZ9 1690 aa10.21□□□□□ -0.77
Usp40-204ENSMUST00000187758 4930407I10RikD3Z5T8 1512 aa10.21□□□□□ -0.78
Usp40-204ENSMUST00000187758 Eif2ak4Q9QZ05 1648 aa10.21□□□□□ -0.78
Usp40-204ENSMUST00000187758 Sbno1Q689Z5 1390 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Gemin5Q8BX17 1502 aaKnown RBP10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Alpk3Q924C5 1678 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Fam184bQ0KK56 942 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 1700123L14RikQ3V2K7 440 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Inpp5dQ9ES52 1191 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Sipa1l1Q8C0T5 1782 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Chd2E9PZM4 1827 aaKnown RBP10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Mrs2Q5NCE8 434 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 PplQ9R269 1755 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Asxl2Q8BZ32 1370 aa10.2□□□□□ -0.78
Usp40-204ENSMUST00000187758 Mink1Q9JM52 1308 aa10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 NrdcQ8BHG1 1161 aa10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 Anks4bQ8K3X6 423 aa10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 Exosc9Q9JHI7 438 aaKnown RBP10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 Cnga1P29974 684 aa10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 Wwc2Q6NXJ0 1187 aa10.19□□□□□ -0.78
Usp40-204ENSMUST00000187758 Zscan10Q3URR7 782 aa10.18□□□□□ -0.78
Usp40-204ENSMUST00000187758 Exoc6Q8R313 802 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 179.2 ms