RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Tcf3P15806 651 aa9.65□□□□□ -0.86
Bdnf-211ENSMUST00000176893 MsnP26041 577 aaKnown RBP9.65□□□□□ -0.86
Bdnf-211ENSMUST00000176893 Gimap8Q75N62 688 aa9.65□□□□□ -0.86
Bdnf-211ENSMUST00000176893 Cluap1Q8R3P7 413 aa9.65□□□□□ -0.86
Bdnf-211ENSMUST00000176893 Atp1b4Q99ME6 356 aa9.65□□□□□ -0.86
Bdnf-211ENSMUST00000176893 Ppm1eQ80TL0 749 aa9.65□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.64□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Hspa5P20029 655 aaKnown RBP9.64□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Pwp2Q8BU03 919 aaKnown RBP9.64□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Mrvi1Q9WUX5 899 aaKnown RBP9.64□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Ppp1r1bQ60829 194 aa9.63□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Map7d2A2AG50 781 aa9.63□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Fam13bQ8K2H3 851 aa9.63□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Slc7a3P70423 618 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Mybpc2Q5XKE0 1136 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Zfyve19Q9DAZ9 389 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 SelenooQ9DBC0 667 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Arap1Q4LDD4 1452 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Lekr1B2RVN1 116 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 UncxO08934 530 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Efcab5A0JP43 1406 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Hsp90ab1P11499 724 aaKnown RBP9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Tmc1Q8R4P5 757 aa9.62□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Ccdc173A0JLY1 547 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Nap1l5Q9JJF0 156 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Tulp1Q9Z273 543 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Erbb3Q61526 1339 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 LrpprcQ6PB66 1392 aaKnown RBP9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 R3hcc1Q8BSI6 488 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Tpd52l2Q9CYZ2 220 aaKnown RBP9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Erich6bQ9D4S6 220 aa9.61□□□□□ -0.87
Bdnf-211ENSMUST00000176893 SlkO54988 1233 aa9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Wwc2Q6NXJ0 1187 aa9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Ttll13A4Q9F6 804 aa9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Rbm26Q6NZN0 1012 aaKnown RBP9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Exoc6Q8R313 802 aa9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Apbb1ipQ8R5A3 670 aa9.6□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Ankrd36D3Z4K0 1415 aa9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 SowahcQ8C0J6 512 aa9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Zfp651E9PZ11 729 aa9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Sema3fO88632 785 aa9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 Cttnbp2B9EJA2 1648 aa9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 PnisrA2AJT4 805 aaKnown RBP9.59□□□□□ -0.87
Bdnf-211ENSMUST00000176893 TnikP83510 1323 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Plb1Q3TTY0 1478 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Speer4eK7N6S8 255 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Ush1cQ9ES64 910 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Arhgef5E9Q7D5 1581 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Dhx57Q6P5D3 1388 aaKnown RBP9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Tagap1P0CAX8 505 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Spink5Q148R4 1017 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Naip5Q9R016 1403 aa9.58□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Plcb2A3KGF7 1181 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Skor2A7M7C7 1008 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 MycnP03966 462 aaKnown RBP9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Fyco1Q8VDC1 1437 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Gm7361D3Z6R1 267 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Pax3P24610 479 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Gpbp1l1Q6NZP2 473 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Pes1Q9EQ61 584 aaKnown RBP9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Trim30dE9PWL0 497 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Zbtb12Q9Z150 459 aa9.57□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Cnga1P29974 684 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Clcn1Q64347 994 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Ofd1Q80Z25 1017 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Chmp4cQ9D7F7 232 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Fam135aQ6NS59 1506 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Rhbdl3P58873 404 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 MpndQ3TV65 487 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Prkrip1Q9CWV6 186 aaKnown RBP9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Fam114a1Q9D281 569 aa9.56□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Fam117aQ7TNF9 451 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Znf771Q8BJ90 317 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Znf330Q922H9 316 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Noa1Q9JJG9 693 aaKnown RBP9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Kank1E9Q238 1360 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Zrsr2Q62377 462 aaKnown RBP9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Gimap6Q8K349 305 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Disp1Q3TDN0 1521 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 1700017N19RikA0A087WPJ1 469 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Becn1O88597 448 aa9.55□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Eea1Q8BL66 1411 aa9.54□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Ripk4Q9ERK0 786 aa9.54□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Irf6P97431 467 aa9.54□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Ncoa1P70365 1447 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 C1qtnf12Q8R2Z0 308 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Dbr1Q923B1 550 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Camsap1A2AHC3 1581 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Gse1Q3U3C9 1213 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Kiaa0753Q6A000 959 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Stac3Q8BZ71 360 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 Gys2Q8VCB3 704 aa9.53□□□□□ -0.88
Bdnf-211ENSMUST00000176893 NudcO35685 332 aaKnown RBP9.52□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Ms4a1P19437 291 aa9.52□□□□□ -0.89
Bdnf-211ENSMUST00000176893 CntlnA2AM05 1397 aa9.52□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Cul7Q8VE73 1689 aa9.52□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Tiam1Q60610 1591 aa9.51□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Rad54l2Q99NG0 1466 aa9.51□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Cald1E9QA15 768 aaKnown RBP9.51□□□□□ -0.89
Bdnf-211ENSMUST00000176893 Il4rP16382 810 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms