RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Slc4a10Q5DTL9 1118 aa13.92□□□□□ -0.18
Cux1-204ENSMUST00000175975 Ifit1bl1D3Z6F0 470 aa13.92□□□□□ -0.18
Cux1-204ENSMUST00000175975 Bicd2Q921C5 820 aa13.92□□□□□ -0.18
Cux1-204ENSMUST00000175975 Commd10Q8JZY2 202 aa13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 Ak7Q9D2H2 614 aa13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 1700123L14RikQ3V2K7 440 aa13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 Psma5Q9Z2U1 241 aaKnown RBP13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 Pak3Q61036 559 aa13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 Arhgef18Q6P9R4 1021 aa13.9□□□□□ -0.18
Cux1-204ENSMUST00000175975 Chmp7Q8R1T1 451 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 CenpqQ9CPQ5 267 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Map9Q3TRR0 646 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Phldb2Q8K1N2 1249 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Stk26Q99JT2 416 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Pnmal2G3X9N3 661 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Srcin1Q9QWI6 1250 aa13.89□□□□□ -0.19
Cux1-204ENSMUST00000175975 Plin1Q8CGN5 517 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 Stim1P70302 685 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 ItpripQ3TNL8 555 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 Gsdma3Q5Y4Y6 464 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 Dcaf11Q91VU6 549 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 Ccdc96Q9CR92 584 aa13.88□□□□□ -0.19
Cux1-204ENSMUST00000175975 WrnO09053 1401 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 Kif16bB1AVY7 1312 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 OptnQ8K3K8 584 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 Tubb6Q922F4 447 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 1700010I14RikQ7TPG0 532 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 Gbp4Q61107 620 aa13.87□□□□□ -0.19
Cux1-204ENSMUST00000175975 Cep89Q9CZX2 791 aa13.86□□□□□ -0.19
Cux1-204ENSMUST00000175975 Kif20aP97329 887 aa13.86□□□□□ -0.19
Cux1-204ENSMUST00000175975 PdcQ9QW08 244 aa13.86□□□□□ -0.19
Cux1-204ENSMUST00000175975 Pkd2O35245 966 aa13.86□□□□□ -0.19
Cux1-204ENSMUST00000175975 Arglu1Q3UL36 271 aaKnown RBP13.86□□□□□ -0.19
Cux1-204ENSMUST00000175975 Rbm25B2RY56 838 aaKnown RBP13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Cluap1Q8R3P7 413 aa13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Cfap99A0A140LIX9 648 aa13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Dixdc1Q80Y83 711 aa13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Cdkn1cP49919 348 aa13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Smc3Q9CW03 1217 aaKnown RBP13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Ddx46Q569Z5 1032 aaKnown RBP13.85□□□□□ -0.19
Cux1-204ENSMUST00000175975 Pdcl3Q8BVF2 240 aa13.84□□□□□ -0.19
Cux1-204ENSMUST00000175975 Prl7d1P04769 244 aa13.84□□□□□ -0.19
Cux1-204ENSMUST00000175975 Sept11Q8C1B7 431 aaKnown RBP13.84□□□□□ -0.19
Cux1-204ENSMUST00000175975 Eif3aP23116 1344 aaKnown RBP13.83□□□□□ -0.19
Cux1-204ENSMUST00000175975 TxlnaQ6PAM1 554 aaKnown RBP13.83□□□□□ -0.2
Cux1-204ENSMUST00000175975 AknaQ80VW7 1404 aa13.83□□□□□ -0.2
Cux1-204ENSMUST00000175975 Ncbp1Q3UYV9 790 aaKnown RBP13.83□□□□□ -0.2
Cux1-204ENSMUST00000175975 Nat10Q8K224 1024 aaKnown RBP13.83□□□□□ -0.2
Cux1-204ENSMUST00000175975 Tmx4Q8C0L0 335 aa13.82□□□□□ -0.2
Cux1-204ENSMUST00000175975 UacaQ8CGB3 1411 aa13.82□□□□□ -0.2
Cux1-204ENSMUST00000175975 Me1P06801 572 aa13.81□□□□□ -0.2
Cux1-204ENSMUST00000175975 Znf330Q922H9 316 aa13.81□□□□□ -0.2
Cux1-204ENSMUST00000175975 Atl3Q91YH5 541 aa13.81□□□□□ -0.2
Cux1-204ENSMUST00000175975 Trim55G3X8Y1 545 aa13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 DesP31001 469 aaKnown RBP13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 Sox12Q04890 314 aa13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 Lrrfip1Q3UZ39 729 aaKnown RBP13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 Tmco3Q8BH01 678 aa13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 Noc2lQ9WV70 747 aaKnown RBP13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 4921530L21RikQ9CQ47 274 aa13.8□□□□□ -0.2
Cux1-204ENSMUST00000175975 Cetn2Q9R1K9 172 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Baz1bQ9Z277 1479 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Cux1P53564 1515 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Gm44503E9PYU5 387 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Ccdc146E9Q9F7 977 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Dnaaf4Q8R368 420 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Ddx23D3Z0M9 819 aaKnown RBP13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Aebp2Q9Z248 504 aaKnown RBP13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Fmn1Q05860 1466 aa13.79□□□□□ -0.2
Cux1-204ENSMUST00000175975 Hmgb1P63158 215 aaKnown RBP13.78□□□□□ -0.2
Cux1-204ENSMUST00000175975 Rock1P70335 1354 aa13.78□□□□□ -0.2
Cux1-204ENSMUST00000175975 Podxl2Q8CAE9 603 aa13.78□□□□□ -0.2
Cux1-204ENSMUST00000175975 SelenooQ9DBC0 667 aa13.78□□□□□ -0.2
Cux1-204ENSMUST00000175975 Ncbp3Q8BZR9 615 aaKnown RBP13.77□□□□□ -0.2
Cux1-204ENSMUST00000175975 Nup155Q99P88 1391 aaKnown RBP13.77□□□□□ -0.21
Cux1-204ENSMUST00000175975 Znf771Q8BJ90 317 aa13.77□□□□□ -0.21
Cux1-204ENSMUST00000175975 Mical3Q8CJ19 1993 aa13.77□□□□□ -0.21
Cux1-204ENSMUST00000175975 Cabp4Q8VHC5 271 aa13.77□□□□□ -0.21
Cux1-204ENSMUST00000175975 Odf2lQ9D478 642 aa13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Hook3Q8BUK6 718 aa13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Plcd4Q8K3R3 807 aa13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Mcm2P97310 904 aa13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Tsen2Q6P7W5 460 aa13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Nop14Q8R3N1 860 aaKnown RBP13.76□□□□□ -0.21
Cux1-204ENSMUST00000175975 Map3k7clP58500 142 aa13.75□□□□□ -0.21
Cux1-204ENSMUST00000175975 Erc1Q99MI1 1120 aa13.75□□□□□ -0.21
Cux1-204ENSMUST00000175975 Slc4a3P16283 1227 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Eva1cP58659 440 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Ehmt1Q5DW34 1296 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Nap1l5Q9JJF0 156 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 AnlnQ8K298 1121 aaKnown RBP13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Mipol1Q9D9F8 279 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Q8C5K5 320 aa13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Eif2s2Q99L45 331 aaKnown RBP13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Mrvi1Q9WUX5 899 aaKnown RBP13.74□□□□□ -0.21
Cux1-204ENSMUST00000175975 Ints3Q7TPD0 1041 aaKnown RBP13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 Nf2P46662 596 aa13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 Cfap53Q9D439 514 aa13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 Taok2Q6ZQ29 1240 aa13.73□□□□□ -0.21
Cux1-204ENSMUST00000175975 Gtf3c3Q3TMP1 882 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms