RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Mbd5B1AYB6 1498 aa12.54□□□□□ -0.4
Trim40-203ENSMUST00000172711 Ino80Q6ZPV2 1559 aa12.53□□□□□ -0.4
Trim40-203ENSMUST00000172711 Txndc2Q6P902 515 aa12.53□□□□□ -0.4
Trim40-203ENSMUST00000172711 Cypt2Q6P924 180 aa12.53□□□□□ -0.4
Trim40-203ENSMUST00000172711 Naip7Q9JIB3 1402 aa12.53□□□□□ -0.4
Trim40-203ENSMUST00000172711 Ttc21bQ0HA38 1315 aa12.53□□□□□ -0.4
Trim40-203ENSMUST00000172711 AnkarA2RT91 1465 aa12.52□□□□□ -0.4
Trim40-203ENSMUST00000172711 Nyap1Q6PFX7 833 aa12.5□□□□□ -0.41
Trim40-203ENSMUST00000172711 Pik3c2aQ61194 1686 aa12.5□□□□□ -0.41
Trim40-203ENSMUST00000172711 Slit2Q9R1B9 1521 aa12.49□□□□□ -0.41
Trim40-203ENSMUST00000172711 Brinp3Q499E0 766 aa12.49□□□□□ -0.41
Trim40-203ENSMUST00000172711 Tom1O88746 492 aa12.48□□□□□ -0.41
Trim40-203ENSMUST00000172711 Fbln2P37889 1221 aa12.48□□□□□ -0.41
Trim40-203ENSMUST00000172711 Zfp644E9QA22 1323 aa12.48□□□□□ -0.41
Trim40-203ENSMUST00000172711 Ehbp1l1Q99MS7 1716 aa12.47□□□□□ -0.41
Trim40-203ENSMUST00000172711 PplQ9R269 1755 aa12.47□□□□□ -0.41
Trim40-203ENSMUST00000172711 P3h3Q8CG70 732 aa12.47□□□□□ -0.41
Trim40-203ENSMUST00000172711 Asxl2Q8BZ32 1370 aa12.46□□□□□ -0.42
Trim40-203ENSMUST00000172711 Bach1P97302 739 aa12.45□□□□□ -0.42
Trim40-203ENSMUST00000172711 Iqgap3F8VQ29 1632 aa12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Ylpm1Q9R0I7 1386 aaKnown RBP12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Efcab6Q6P1E8 1516 aa12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Kif21bQ9QXL1 1668 aa12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Akt1s1Q9D1F4 257 aa12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Atp7aQ64430 1491 aa12.44□□□□□ -0.42
Trim40-203ENSMUST00000172711 Lmtk3Q5XJV6 1424 aa12.43□□□□□ -0.42
Trim40-203ENSMUST00000172711 Gm13695A2AK44 830 aa12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Map4P27546 1125 aaKnown RBP12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Psme1P97371 249 aa12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Gimap5Q8BWF2 308 aa12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Rtn4Q99P72 1162 aaKnown RBP12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Myom3A2ABU4 1439 aa12.42□□□□□ -0.42
Trim40-203ENSMUST00000172711 Arap3Q8R5G7 1538 aa12.41□□□□□ -0.42
Trim40-203ENSMUST00000172711 Nup155Q99P88 1391 aaKnown RBP12.41□□□□□ -0.42
Trim40-203ENSMUST00000172711 Ankrd36D3Z4K0 1415 aa12.41□□□□□ -0.42
Trim40-203ENSMUST00000172711 Tecpr2Q3UH45 1423 aa12.41□□□□□ -0.42
Trim40-203ENSMUST00000172711 Evi5lH3BKQ3 813 aa12.41□□□□□ -0.42
Trim40-203ENSMUST00000172711 Prrc2bQ7TPM1 1486 aaKnown RBP12.4□□□□□ -0.42
Trim40-203ENSMUST00000172711 Nhsl1Q8CAF4 1587 aa12.4□□□□□ -0.42
Trim40-203ENSMUST00000172711 Tns3Q5SSZ5 1440 aa12.4□□□□□ -0.43
Trim40-203ENSMUST00000172711 PalldQ9ET54 1408 aa12.4□□□□□ -0.43
Trim40-203ENSMUST00000172711 Uggt1Q6P5E4 1551 aa12.39□□□□□ -0.43
Trim40-203ENSMUST00000172711 Ttll13A4Q9F6 804 aa12.39□□□□□ -0.43
Trim40-203ENSMUST00000172711 Erich6D3Z6S9 713 aa12.39□□□□□ -0.43
Trim40-203ENSMUST00000172711 Slain2Q8CI08 581 aa12.39□□□□□ -0.43
Trim40-203ENSMUST00000172711 Fam50aQ9WV03 339 aaKnown RBP12.39□□□□□ -0.43
Trim40-203ENSMUST00000172711 Slit3Q9WVB4 1523 aa12.38□□□□□ -0.43
Trim40-203ENSMUST00000172711 Tarbp1E9Q368 1579 aa12.38□□□□□ -0.43
Trim40-203ENSMUST00000172711 Sema6bO54951 886 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Stk24Q99KH8 431 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Mroh1E0CZ22 1640 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Rfx7F8VPJ6 1459 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Arhgef28P97433 1693 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Sall3Q62255 1320 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 UacaQ8CGB3 1411 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Ttll5Q8CHB8 1328 aa12.37□□□□□ -0.43
Trim40-203ENSMUST00000172711 Cd109Q8R422 1442 aa12.36□□□□□ -0.43
Trim40-203ENSMUST00000172711 NclP09405 707 aaKnown RBP12.36□□□□□ -0.43
Trim40-203ENSMUST00000172711 Cntnap1O54991 1385 aa12.35□□□□□ -0.43
Trim40-203ENSMUST00000172711 Nsd2Q8BVE8 1365 aa12.35□□□□□ -0.43
Trim40-203ENSMUST00000172711 Prm3Q62100 101 aa12.35□□□□□ -0.43
Trim40-203ENSMUST00000172711 Qtrt2B8ZXI1 415 aa12.34□□□□□ -0.43
Trim40-203ENSMUST00000172711 Slc5a4bQ91ZP4 660 aa12.34□□□□□ -0.43
Trim40-203ENSMUST00000172711 Abca8aQ8K442 1620 aa12.34□□□□□ -0.43
Trim40-203ENSMUST00000172711 Fnbp4Q6ZQ03 1031 aa12.32□□□□□ -0.44
Trim40-203ENSMUST00000172711 Slc34a2Q9DBP0 697 aa12.32□□□□□ -0.44
Trim40-203ENSMUST00000172711 Clstn2Q9ER65 966 aa12.32□□□□□ -0.44
Trim40-203ENSMUST00000172711 Pik3c2gO70167 1506 aa12.32□□□□□ -0.44
Trim40-203ENSMUST00000172711 PtprvP70289 1705 aa12.32□□□□□ -0.44
Trim40-203ENSMUST00000172711 Lrp6O88572 1613 aa12.31□□□□□ -0.44
Trim40-203ENSMUST00000172711 Zfp142G5E869 1843 aa12.31□□□□□ -0.44
Trim40-203ENSMUST00000172711 Myom1Q62234 1667 aaKnown RBP12.31□□□□□ -0.44
Trim40-203ENSMUST00000172711 ArsiQ32KI9 573 aa12.31□□□□□ -0.44
Trim40-203ENSMUST00000172711 Unc13bQ9Z1N9 1602 aa12.31□□□□□ -0.44
Trim40-203ENSMUST00000172711 Adgrl1Q80TR1 1466 aa12.3□□□□□ -0.44
Trim40-203ENSMUST00000172711 Ildr2B5TVM2 661 aa12.3□□□□□ -0.44
Trim40-203ENSMUST00000172711 Tmem94Q7TSH8 1360 aa12.3□□□□□ -0.44
Trim40-203ENSMUST00000172711 Col14a1Q80X19 1797 aa12.29□□□□□ -0.44
Trim40-203ENSMUST00000172711 NalcnQ8BXR5 1738 aa12.29□□□□□ -0.44
Trim40-203ENSMUST00000172711 PtprgQ05909 1442 aa12.29□□□□□ -0.44
Trim40-203ENSMUST00000172711 Znf526Q8BI66 675 aa12.29□□□□□ -0.44
Trim40-203ENSMUST00000172711 MypopQ8R4U1 393 aa12.29□□□□□ -0.44
Trim40-203ENSMUST00000172711 Nwd1A6H603 1563 aa12.28□□□□□ -0.44
Trim40-203ENSMUST00000172711 Siglec1Q62230 1695 aa12.28□□□□□ -0.44
Trim40-203ENSMUST00000172711 Trak1Q6PD31 939 aa12.28□□□□□ -0.44
Trim40-203ENSMUST00000172711 AatkQ80YE4 1365 aa12.27□□□□□ -0.44
Trim40-203ENSMUST00000172711 AU022751B1B0V2 589 aa12.27□□□□□ -0.45
Trim40-203ENSMUST00000172711 Edc4Q3UJB9 1406 aaKnown RBP12.26□□□□□ -0.45
Trim40-203ENSMUST00000172711 ErbinQ80TH2 1402 aa12.26□□□□□ -0.45
Trim40-203ENSMUST00000172711 Ift172Q6VH22 1749 aa12.26□□□□□ -0.45
Trim40-203ENSMUST00000172711 Bcl2l12Q9D3J3 255 aa12.26□□□□□ -0.45
Trim40-203ENSMUST00000172711 C1qtnf12Q8R2Z0 308 aa12.25□□□□□ -0.45
Trim40-203ENSMUST00000172711 Q9D9H8 365 aa12.25□□□□□ -0.45
Trim40-203ENSMUST00000172711 NinlQ6ZQ12 1394 aa12.24□□□□□ -0.45
Trim40-203ENSMUST00000172711 C3P01027 1663 aa12.24□□□□□ -0.45
Trim40-203ENSMUST00000172711 Atf3Q60765 181 aa12.23□□□□□ -0.45
Trim40-203ENSMUST00000172711 Atp1b4Q99ME6 356 aa12.23□□□□□ -0.45
Trim40-203ENSMUST00000172711 HnrnpmQ9D0E1 729 aaKnown RBP12.23□□□□□ -0.45
Trim40-203ENSMUST00000172711 UbtfP25976 765 aaKnown RBP12.22□□□□□ -0.45
Trim40-203ENSMUST00000172711 Sox12Q04890 314 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms