RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Gm35339A0A140LHH9 1649 aa19.46■□□□□ 0.71
Trim40-203ENSMUST00000172711 NischQ80TM9 1593 aa19.02■□□□□ 0.64
Trim40-203ENSMUST00000172711 Chic1Q8CBW7 227 aa18.97■□□□□ 0.63
Trim40-203ENSMUST00000172711 Abcc8B2RUS7 1588 aa18.51■□□□□ 0.55
Trim40-203ENSMUST00000172711 Abcc9P70170 1546 aa18.51■□□□□ 0.55
Trim40-203ENSMUST00000172711 ScribQ80U72 1612 aa18.16■□□□□ 0.5
Trim40-203ENSMUST00000172711 Mapk8ip2Q9ERE9 830 aa17.9■□□□□ 0.46
Trim40-203ENSMUST00000172711 Kdm5dQ62240 1548 aa17.4■□□□□ 0.38
Trim40-203ENSMUST00000172711 NacadQ5SWP3 1504 aa17.38■□□□□ 0.37
Trim40-203ENSMUST00000172711 Dnajc5bQ9CQ94 199 aa17.11■□□□□ 0.33
Trim40-203ENSMUST00000172711 Sycp2Q9CUU3 1500 aa17.1■□□□□ 0.33
Trim40-203ENSMUST00000172711 Phf23Q8BSN5 401 aa17.05■□□□□ 0.32
Trim40-203ENSMUST00000172711 BicraF8VPZ9 1578 aa17.01■□□□□ 0.31
Trim40-203ENSMUST00000172711 Dcaf1Q80TR8 1506 aa16.92■□□□□ 0.3
Trim40-203ENSMUST00000172711 Plppr3Q7TPB0 716 aa16.92■□□□□ 0.3
Trim40-203ENSMUST00000172711 Thoc2B1AZI6 1594 aaKnown RBP16.56■□□□□ 0.24
Trim40-203ENSMUST00000172711 Rb1cc1Q9ESK9 1588 aa16.56■□□□□ 0.24
Trim40-203ENSMUST00000172711 Gab3Q8BSM5 595 aa16.54■□□□□ 0.24
Trim40-203ENSMUST00000172711 Pds5bQ4VA53 1446 aaKnown RBP16.43■□□□□ 0.22
Trim40-203ENSMUST00000172711 Cc2d2aQ8CFW7 1633 aa16.28■□□□□ 0.2
Trim40-203ENSMUST00000172711 Baz1aO88379 1555 aa16.26■□□□□ 0.19
Trim40-203ENSMUST00000172711 Atad2bE9Q166 1460 aaKnown RBP16.24■□□□□ 0.19
Trim40-203ENSMUST00000172711 Crybg2B7ZCC2 1516 aa16.17■□□□□ 0.18
Trim40-203ENSMUST00000172711 Ccdc180J3QNE4 1664 aa16.16■□□□□ 0.18
Trim40-203ENSMUST00000172711 Zcchc6Q5BLK4 1491 aaKnown RBP16.09■□□□□ 0.17
Trim40-203ENSMUST00000172711 Ercc6F8VPZ5 1481 aa16.09■□□□□ 0.17
Trim40-203ENSMUST00000172711 Smarca2Q6DIC0 1577 aa16.07■□□□□ 0.16
Trim40-203ENSMUST00000172711 Fam135aQ6NS59 1506 aa16.06■□□□□ 0.16
Trim40-203ENSMUST00000172711 Rhox8Q6VSS7 320 aa16.01■□□□□ 0.15
Trim40-203ENSMUST00000172711 Smarca4Q3TKT4 1613 aaKnown RBP16.01■□□□□ 0.15
Trim40-203ENSMUST00000172711 Iqgap2Q3UQ44 1575 aa16■□□□□ 0.15
Trim40-203ENSMUST00000172711 Cecr2E9Q2Z1 1453 aa15.94■□□□□ 0.14
Trim40-203ENSMUST00000172711 Wdr62Q3U3T8 1523 aa15.91■□□□□ 0.14
Trim40-203ENSMUST00000172711 Frmpd1A2AKB4 1549 aa15.9■□□□□ 0.14
Trim40-203ENSMUST00000172711 Senp3Q9EP97 568 aaKnown RBP15.83■□□□□ 0.12
Trim40-203ENSMUST00000172711 Phldb1Q6PDH0 1371 aaKnown RBP15.8■□□□□ 0.12
Trim40-203ENSMUST00000172711 Unc13aQ4KUS2 1712 aa15.78■□□□□ 0.12
Trim40-203ENSMUST00000172711 Kcna4Q61423 654 aa15.77■□□□□ 0.11
Trim40-203ENSMUST00000172711 Dnajc5P60904 198 aa15.69■□□□□ 0.1
Trim40-203ENSMUST00000172711 Baz1bQ9Z277 1479 aa15.68■□□□□ 0.1
Trim40-203ENSMUST00000172711 Ubl4bQ9CQ84 188 aa15.68■□□□□ 0.1
Trim40-203ENSMUST00000172711 Mrc2Q64449 1479 aa15.66■□□□□ 0.1
Trim40-203ENSMUST00000172711 Trim41Q5NCC3 630 aa15.6■□□□□ 0.09
Trim40-203ENSMUST00000172711 CftrP26361 1476 aa15.44■□□□□ 0.06
Trim40-203ENSMUST00000172711 Lrriq1Q0P5X1 1673 aa15.43■□□□□ 0.06
Trim40-203ENSMUST00000172711 Cttnbp2B9EJA2 1648 aa15.42■□□□□ 0.06
Trim40-203ENSMUST00000172711 Synj1Q8CHC4 1574 aa15.42■□□□□ 0.06
Trim40-203ENSMUST00000172711 Kif21aQ9QXL2 1672 aa15.3■□□□□ 0.04
Trim40-203ENSMUST00000172711 Rsf1E9PWW9 1441 aaKnown RBP15.25■□□□□ 0.03
Trim40-203ENSMUST00000172711 Cux2P70298 1426 aa15.25■□□□□ 0.03
Trim40-203ENSMUST00000172711 Rtl1Q7M732 1744 aa15.21■□□□□ 0.03
Trim40-203ENSMUST00000172711 Brd4Q9ESU6 1400 aaKnown RBP15.21■□□□□ 0.03
Trim40-203ENSMUST00000172711 Kif15Q6P9L6 1387 aa15.16■□□□□ 0.02
Trim40-203ENSMUST00000172711 Eif4g3Q80XI3 1579 aaKnown RBP15.16■□□□□ 0.02
Trim40-203ENSMUST00000172711 Shroom2A2ALU4 1481 aa15.13■□□□□ 0.01
Trim40-203ENSMUST00000172711 Ccdc136Q3TVA9 1136 aa15.1■□□□□ 0.01
Trim40-203ENSMUST00000172711 Lamc3Q9R0B6 1581 aa15.07■□□□□ 0
Trim40-203ENSMUST00000172711 Col17a1Q07563 1470 aa15.05■□□□□ -0
Trim40-203ENSMUST00000172711 Esf1Q3V1V3 845 aaKnown RBP15.04■□□□□ -0
Trim40-203ENSMUST00000172711 Urb2E9Q7L1 1524 aaKnown RBP15.01□□□□□ -0.01
Trim40-203ENSMUST00000172711 Npm1Q61937 292 aaKnown RBP14.97□□□□□ -0.01
Trim40-203ENSMUST00000172711 Plb1Q3TTY0 1478 aa14.95□□□□□ -0.02
Trim40-203ENSMUST00000172711 Cep164Q5DU05 1446 aa14.91□□□□□ -0.02
Trim40-203ENSMUST00000172711 Top2bQ64511 1612 aa14.9□□□□□ -0.02
Trim40-203ENSMUST00000172711 Dhx29Q6PGC1 1365 aaKnown RBP14.89□□□□□ -0.03
Trim40-203ENSMUST00000172711 Pabpn1Q8CCS6 302 aaKnown RBP14.87□□□□□ -0.03
Trim40-203ENSMUST00000172711 Crocc2F6XLV1 1638 aa14.84□□□□□ -0.03
Trim40-203ENSMUST00000172711 TnnQ80Z71 1560 aa14.82□□□□□ -0.04
Trim40-203ENSMUST00000172711 Il27Q8K3I6 234 aa14.82□□□□□ -0.04
Trim40-203ENSMUST00000172711 Rusc2Q80U22 1514 aa14.81□□□□□ -0.04
Trim40-203ENSMUST00000172711 LrpprcQ6PB66 1392 aaKnown RBP14.78□□□□□ -0.04
Trim40-203ENSMUST00000172711 Camsap1A2AHC3 1581 aa14.78□□□□□ -0.04
Trim40-203ENSMUST00000172711 Pelp1Q9DBD5 1123 aaKnown RBP14.78□□□□□ -0.04
Trim40-203ENSMUST00000172711 Ccdc18Q640L5 1455 aa14.76□□□□□ -0.05
Trim40-203ENSMUST00000172711 Zcchc11B2RX14 1644 aaKnown RBP14.73□□□□□ -0.05
Trim40-203ENSMUST00000172711 Ift140E9PY46 1464 aa14.71□□□□□ -0.05
Trim40-203ENSMUST00000172711 Setd1bQ8CFT2 1985 aa14.71□□□□□ -0.05
Trim40-203ENSMUST00000172711 PogzQ8BZH4 1409 aaKnown RBP14.69□□□□□ -0.06
Trim40-203ENSMUST00000172711 Pcdh10E9PXQ7 1057 aa14.67□□□□□ -0.06
Trim40-203ENSMUST00000172711 Disp1Q3TDN0 1521 aa14.63□□□□□ -0.07
Trim40-203ENSMUST00000172711 Duox2A2AQ99 1517 aa14.62□□□□□ -0.07
Trim40-203ENSMUST00000172711 Golga3P55937 1487 aa14.59□□□□□ -0.07
Trim40-203ENSMUST00000172711 Samd9lQ69Z37 1561 aa14.59□□□□□ -0.07
Trim40-203ENSMUST00000172711 Arhgef5E9Q7D5 1581 aa14.57□□□□□ -0.08
Trim40-203ENSMUST00000172711 Adgrl3Q80TS3 1537 aa14.56□□□□□ -0.08
Trim40-203ENSMUST00000172711 Nup160Q9Z0W3 1402 aaKnown RBP14.56□□□□□ -0.08
Trim40-203ENSMUST00000172711 Cngb1E1AZ71 1325 aa14.54□□□□□ -0.08
Trim40-203ENSMUST00000172711 Cep170Q6A065 1588 aa14.52□□□□□ -0.08
Trim40-203ENSMUST00000172711 Grin2bQ01097 1482 aa14.51□□□□□ -0.09
Trim40-203ENSMUST00000172711 Pbrm1Q8BSQ9 1634 aaKnown RBP14.51□□□□□ -0.09
Trim40-203ENSMUST00000172711 Cc2d2bA0A286YDU8 1405 aa14.49□□□□□ -0.09
Trim40-203ENSMUST00000172711 PtprkP35822 1457 aa14.48□□□□□ -0.09
Trim40-203ENSMUST00000172711 Fmn1Q05860 1466 aa14.48□□□□□ -0.09
Trim40-203ENSMUST00000172711 Gapvd1Q6PAR5 1458 aa14.47□□□□□ -0.09
Trim40-203ENSMUST00000172711 Rad54l2Q99NG0 1466 aa14.46□□□□□ -0.09
Trim40-203ENSMUST00000172711 Gm156Q58A37 223 aa14.46□□□□□ -0.1
Trim40-203ENSMUST00000172711 PtprtQ99M80 1454 aa14.45□□□□□ -0.1
Trim40-203ENSMUST00000172711 Ttbk1Q6PCN3 1308 aa14.44□□□□□ -0.1
Trim40-203ENSMUST00000172711 Ube2uB1AUC4 352 aa14.44□□□□□ -0.1
Trim40-203ENSMUST00000172711 Magi3Q9EQJ9 1476 aa14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms