RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 P3h3Q8CG70 732 aa20.09■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Ehbp1l1Q99MS7 1716 aa20.09■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Rprd2Q6NXI6 1469 aaKnown RBP20.09■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Prrc2bQ7TPM1 1486 aaKnown RBP20.09■□□□□ 0.81
Ercc1-203ENSMUST00000160369 AatkQ80YE4 1365 aa20.08■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Dot1lQ6XZL8 1540 aa20.08■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Psme1P97371 249 aa20.08■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Eid3Q3V124 375 aa20.08■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Rock1P70335 1354 aa20.08■□□□□ 0.8
Ercc1-203ENSMUST00000160369 Sall3Q62255 1320 aa20.07■□□□□ 0.8
Ercc1-203ENSMUST00000160369 Lmtk3Q5XJV6 1424 aa20.07■□□□□ 0.8
Ercc1-203ENSMUST00000160369 Usp47Q8BY87 1376 aa20.04■□□□□ 0.8
Ercc1-203ENSMUST00000160369 Zc3h13E9Q784 1729 aaKnown RBP20.03■□□□□ 0.8
Ercc1-203ENSMUST00000160369 PplQ9R269 1755 aa20.02■□□□□ 0.8
Ercc1-203ENSMUST00000160369 PalldQ9ET54 1408 aa20.02■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Ltbp4Q8K4G1 1666 aa20.01■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Rapgef3Q8VCC8 918 aa20.01■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Washc2Q6PGL7 1334 aa19.99■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Atp1b4Q99ME6 356 aa19.97■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Iqgap1Q9JKF1 1657 aaKnown RBP19.97■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Nrxn3Q6P9K9 1571 aa19.96■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Myo3aQ8K3H5 1613 aa19.96■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Rgl3Q3UYI5 709 aa19.96■□□□□ 0.79
Ercc1-203ENSMUST00000160369 Eif2ak4Q9QZ05 1648 aa19.95■□□□□ 0.78
Ercc1-203ENSMUST00000160369 Hspa5P20029 655 aaKnown RBP19.95■□□□□ 0.78
Ercc1-203ENSMUST00000160369 Plxnc1Q9QZC2 1574 aa19.95■□□□□ 0.78
Ercc1-203ENSMUST00000160369 AU022751B1B0V2 589 aa19.93■□□□□ 0.78
Ercc1-203ENSMUST00000160369 Arhgef28P97433 1693 aa19.93■□□□□ 0.78
Ercc1-203ENSMUST00000160369 Med1Q925J9 1575 aa19.91■□□□□ 0.78
Ercc1-203ENSMUST00000160369 PzpQ61838 1495 aa19.89■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Rims1Q99NE5 1463 aa19.89■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Slc52a2Q9D8F3 450 aa19.89■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Slit3Q9WVB4 1523 aa19.89■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Tulp4Q9JIL5 1547 aa19.88■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Shq1Q7TMX5 569 aa19.88■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Ifit1bl1D3Z6F0 470 aa19.87■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Setd1aE9PYH6 1716 aa19.86■□□□□ 0.77
Ercc1-203ENSMUST00000160369 NefmP08553 848 aa19.86■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Q9D9H8 365 aa19.86■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Myom1Q62234 1667 aaKnown RBP19.86■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Pik3r4Q8VD65 1358 aa19.85■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Srpk2O54781 681 aaKnown RBP19.85■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Os9Q8K2C7 672 aa19.85■□□□□ 0.77
Ercc1-203ENSMUST00000160369 IghaA0A0A6YXW6 389 aa19.84■□□□□ 0.77
Ercc1-203ENSMUST00000160369 Adamts13Q769J6 1426 aa19.83■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Gli3Q61602 1583 aa19.83■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Kdm2aP59997 1161 aa19.82■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Cep152A2AUM9 1736 aaKnown RBP19.81■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Asxl2Q8BZ32 1370 aa19.81■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Cdk13Q69ZA1 1511 aaKnown RBP19.8■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Gm20521D3Z5F7 333 aa19.79■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Grwd1Q810D6 446 aaKnown RBP19.79■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Tubgcp6G5E8P0 1769 aa19.79■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Neurod1Q60867 357 aa19.77■□□□□ 0.76
Ercc1-203ENSMUST00000160369 Thsd7aQ69ZU6 1645 aa19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 MaddQ80U28 1577 aa19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Polr3aB2RXC6 1390 aa19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Fan1Q69ZT1 1020 aa19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Arap3Q8R5G7 1538 aa19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Acin1Q9JIX8 1338 aaKnown RBP19.76■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Puf60Q3UEB3 564 aaKnown RBP19.73■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Tns3Q5SSZ5 1440 aa19.73■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Cpsf1Q9EPU4 1441 aaKnown RBP19.72■□□□□ 0.75
Ercc1-203ENSMUST00000160369 Utp14aQ640M1 767 aaKnown RBP19.71■□□□□ 0.75
Ercc1-203ENSMUST00000160369 HnrnpmQ9D0E1 729 aaKnown RBP19.71■□□□□ 0.75
Ercc1-203ENSMUST00000160369 TonslQ6NZL6 1363 aa19.7■□□□□ 0.74
Ercc1-203ENSMUST00000160369 IqubQ8CDK3 788 aa19.69■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Stk26Q99JT2 416 aa19.69■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Lrrc7Q80TE7 1490 aa19.67■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Cps1Q8C196 1500 aa19.67■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Iqsec2Q5DU25 1478 aa19.67■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Stard8Q8K031 1019 aa19.66■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Cdk5rap2Q8K389 1822 aa19.66■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Fbxo41Q6NS60 873 aa19.65■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Plekhg1F6S200 1446 aa19.65■□□□□ 0.74
Ercc1-203ENSMUST00000160369 Mbd5B1AYB6 1498 aa19.64■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Unc13bQ9Z1N9 1602 aa19.64■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Col18a1P39061 1774 aa19.64■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Slain2Q8CI08 581 aa19.63■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Mug2P28666 1451 aa19.62■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Usp40Q8BWR4 1235 aa19.62■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Stag3O70576 1240 aa19.61■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Tmem94Q7TSH8 1360 aa19.6■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Evi5lH3BKQ3 813 aa19.6■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Hspa1lP16627 641 aa19.6■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Bcl11bQ99PV8 884 aa19.6■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Ift172Q6VH22 1749 aa19.59■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Dapk1Q80YE7 1442 aa19.59■□□□□ 0.73
Ercc1-203ENSMUST00000160369 Gtf2e1Q9D0D5 440 aa19.57■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Nphp4P59240 1425 aa19.57■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Sipa1l1Q8C0T5 1782 aa19.57■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Q3UJC8 639 aa19.56■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Col14a1Q80X19 1797 aa19.56■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Nwd1A6H603 1563 aa19.55■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Rundc1Q0VDN7 615 aa19.55■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Brinp3Q499E0 766 aa19.55■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Atf3Q60765 181 aa19.55■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Amigo3Q8C2S7 508 aa19.55■□□□□ 0.72
Ercc1-203ENSMUST00000160369 DnmbpQ6TXD4 1580 aa19.54■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Cep170bQ80U49 1574 aa19.54■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms