RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 Kif21aQ9QXL2 1672 aa11.88□□□□□ -0.51
Trim17-202ENSMUST00000075141 AU015836B2RUM3 263 aa11.88□□□□□ -0.51
Trim17-202ENSMUST00000075141 Pnmal2G3X9N3 661 aa11.88□□□□□ -0.51
Trim17-202ENSMUST00000075141 Cd109Q8R422 1442 aa11.88□□□□□ -0.51
Trim17-202ENSMUST00000075141 Prex2Q3LAC4 1598 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Clstn2Q9ER65 966 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Htatsf1Q8BGC0 757 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Rlbp1Q9Z275 317 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Kdm5cP41230 1554 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Arhgef11Q68FM7 1552 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Adamts12Q811B3 1600 aa11.87□□□□□ -0.51
Trim17-202ENSMUST00000075141 Sart1Q9Z315 806 aaKnown RBP11.86□□□□□ -0.51
Trim17-202ENSMUST00000075141 Sall3Q62255 1320 aa11.86□□□□□ -0.51
Trim17-202ENSMUST00000075141 Dot1lQ6XZL8 1540 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Rab3gap2Q8BMG7 1366 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Cdc42bpaQ3UU96 1719 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Mfap1aC0HKD8 439 aaKnown RBP11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Mfap1bC0HKD9 439 aaKnown RBP11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Atp7aQ64430 1491 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Gm20521D3Z5F7 333 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Ccdc141E9Q8Q6 1531 aa11.85□□□□□ -0.51
Trim17-202ENSMUST00000075141 Pdcl3Q8BVF2 240 aa11.84□□□□□ -0.51
Trim17-202ENSMUST00000075141 Magi1Q6RHR9 1471 aa11.84□□□□□ -0.51
Trim17-202ENSMUST00000075141 AknaQ80VW7 1404 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Tarbp1E9Q368 1579 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Duxf3A0A0N4SV92 674 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Tex14Q7M6U3 1450 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Plcb2A3KGF7 1181 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Scaf1Q5U4C3 1256 aaKnown RBP11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Znf316Q6PGE4 1016 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Stk24Q99KH8 431 aa11.83□□□□□ -0.52
Trim17-202ENSMUST00000075141 Ssh2Q5SW75 1423 aa11.82□□□□□ -0.52
Trim17-202ENSMUST00000075141 Znf330Q922H9 316 aa11.82□□□□□ -0.52
Trim17-202ENSMUST00000075141 Abca16E9PWJ7 1678 aa11.82□□□□□ -0.52
Trim17-202ENSMUST00000075141 Plch2A2AP18 1501 aa11.82□□□□□ -0.52
Trim17-202ENSMUST00000075141 Pdlim2Q8R1G6 349 aa11.81□□□□□ -0.52
Trim17-202ENSMUST00000075141 Senp3Q9EP97 568 aaKnown RBP11.81□□□□□ -0.52
Trim17-202ENSMUST00000075141 Sptbn5F6UCX4 1208 aa11.81□□□□□ -0.52
Trim17-202ENSMUST00000075141 Shroom2A2ALU4 1481 aa11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 Ksr2Q3UVC0 959 aa11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 Fan1Q69ZT1 1020 aa11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 DekQ7TNV0 380 aaKnown RBP11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 Fam163aQ8CAA5 168 aa11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 Ppp1r3fQ9JIG4 799 aa11.8□□□□□ -0.52
Trim17-202ENSMUST00000075141 Kiaa1551Q5DTW7 1521 aa11.79□□□□□ -0.52
Trim17-202ENSMUST00000075141 Paxip1Q6NZQ4 1056 aa11.79□□□□□ -0.52
Trim17-202ENSMUST00000075141 Apaf1O88879 1249 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Pde4cQ3UEI1 686 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Iqgap1Q9JKF1 1657 aaKnown RBP11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Trpm2Q91YD4 1506 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Usp19Q3UJD6 1360 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Ppp2r3aB2RXC8 1150 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Trim58Q5NCC9 485 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Rfx1P48377 963 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 Gtf2e1Q9D0D5 440 aa11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 DroshaQ5HZJ0 1373 aaKnown RBP11.78□□□□□ -0.52
Trim17-202ENSMUST00000075141 PtprgQ05909 1442 aa11.77□□□□□ -0.52
Trim17-202ENSMUST00000075141 Il4rP16382 810 aa11.77□□□□□ -0.52
Trim17-202ENSMUST00000075141 Map3k5O35099 1380 aa11.77□□□□□ -0.52
Trim17-202ENSMUST00000075141 Trappc8E9PWG2 1437 aa11.77□□□□□ -0.53
Trim17-202ENSMUST00000075141 Spag9Q58A65 1321 aaKnown RBP11.77□□□□□ -0.53
Trim17-202ENSMUST00000075141 Catsper2A2ARP9 588 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 SlkO54988 1233 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 NgefQ8CHT1 710 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Gtf2a1Q99PM3 378 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Ssh1Q76I79 1042 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Usp40Q8BWR4 1235 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Ttc41Q692V3 1318 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Setd1bQ8CFT2 1985 aa11.76□□□□□ -0.53
Trim17-202ENSMUST00000075141 Tubgcp6G5E8P0 1769 aa11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Gm16486A0A1D5RMD1 1434 aa11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Rabep1O35551 862 aa11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Srpk2O54781 681 aaKnown RBP11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Aplp1Q03157 653 aa11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Ralbp1Q62172 648 aa11.75□□□□□ -0.53
Trim17-202ENSMUST00000075141 Uspl1Q3ULM6 1089 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Gapvd1Q6PAR5 1458 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Mroh2aD3Z750 1679 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Jph4Q80WT0 628 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Nutm1Q8BHP2 1126 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 DmtnQ9WV69 405 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Mlh3A0A1Y7VMP7 1443 aa11.74□□□□□ -0.53
Trim17-202ENSMUST00000075141 Lrrc9Q8CDN9 1456 aa11.73□□□□□ -0.53
Trim17-202ENSMUST00000075141 U2af1Q9D883 239 aaKnown RBP11.73□□□□□ -0.53
Trim17-202ENSMUST00000075141 Ylpm1Q9R0I7 1386 aaKnown RBP11.73□□□□□ -0.53
Trim17-202ENSMUST00000075141 Mcm4P49717 862 aa11.72□□□□□ -0.53
Trim17-202ENSMUST00000075141 Mapkbp1Q6NS57 1503 aa11.72□□□□□ -0.53
Trim17-202ENSMUST00000075141 Eif4g3Q80XI3 1579 aaKnown RBP11.72□□□□□ -0.53
Trim17-202ENSMUST00000075141 Arhgap5P97393 1501 aa11.71□□□□□ -0.53
Trim17-202ENSMUST00000075141 GorabQ8BRM2 368 aa11.71□□□□□ -0.53
Trim17-202ENSMUST00000075141 Abcc2Q8VI47 1543 aa11.71□□□□□ -0.53
Trim17-202ENSMUST00000075141 Kiaa1107Q80TK0 1369 aa11.71□□□□□ -0.53
Trim17-202ENSMUST00000075141 Atf7ipQ7TT18 1306 aa11.71□□□□□ -0.53
Trim17-202ENSMUST00000075141 Nsfl1cQ9CZ44 370 aaKnown RBP11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 Antxr1Q9CZ52 562 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 Setd1aE9PYH6 1716 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 AU019823E9PUQ3 292 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 GsdmaQ9EST1 446 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 Mrc2Q64449 1479 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 Stk11ipQ3TAA7 1072 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms