RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gemin5Q8BX17 1502 aaKnown RBP35.86■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Ltbp4Q8K4G1 1666 aa35.86■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Eid3Q3V124 375 aa35.84■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Ehbp1l1Q99MS7 1716 aa35.84■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Dot1lQ6XZL8 1540 aa35.84■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Psme1P97371 249 aa35.83■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 P3h3Q8CG70 732 aa35.83■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Mroh3A0A1D5RM54 893 aa35.79■■■■□ 3.32
Cpsf4-201ENSMUST00000070487 Rprd2Q6NXI6 1469 aaKnown RBP35.78■■■■□ 3.32
Cpsf4-201ENSMUST00000070487 Gm13695A2AK44 830 aa35.77■■■■□ 3.32
Cpsf4-201ENSMUST00000070487 Rapgef3Q8VCC8 918 aa35.77■■■■□ 3.32
Cpsf4-201ENSMUST00000070487 Rock1P70335 1354 aa35.76■■■■□ 3.32
Cpsf4-201ENSMUST00000070487 Lmtk3Q5XJV6 1424 aa35.75■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 PplQ9R269 1755 aa35.72■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 Zc3h13E9Q784 1729 aaKnown RBP35.71■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 Washc2Q6PGL7 1334 aa35.7■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 Usp47Q8BY87 1376 aa35.7■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 PalldQ9ET54 1408 aa35.7■■■■□ 3.31
Cpsf4-201ENSMUST00000070487 AU022751B1B0V2 589 aa35.66■■■■□ 3.3
Cpsf4-201ENSMUST00000070487 Nrxn3Q6P9K9 1571 aa35.66■■■■□ 3.3
Cpsf4-201ENSMUST00000070487 Eif2ak4Q9QZ05 1648 aa35.66■■■■□ 3.3
Cpsf4-201ENSMUST00000070487 Iqgap1Q9JKF1 1657 aaKnown RBP35.65■■■■□ 3.3
Cpsf4-201ENSMUST00000070487 Myo3aQ8K3H5 1613 aa35.63■■■■□ 3.29
Cpsf4-201ENSMUST00000070487 Hspa5P20029 655 aaKnown RBP35.61■■■■□ 3.29
Cpsf4-201ENSMUST00000070487 IghaA0A0A6YXW6 389 aa35.6■■■■□ 3.29
Cpsf4-201ENSMUST00000070487 Rgl3Q3UYI5 709 aa35.59■■■■□ 3.29
Cpsf4-201ENSMUST00000070487 Atp1b4Q99ME6 356 aa35.59■■■■□ 3.29
Cpsf4-201ENSMUST00000070487 Med1Q925J9 1575 aa35.56■■■■□ 3.28
Cpsf4-201ENSMUST00000070487 PzpQ61838 1495 aa35.55■■■■□ 3.28
Cpsf4-201ENSMUST00000070487 Plxnc1Q9QZC2 1574 aa35.54■■■■□ 3.28
Cpsf4-201ENSMUST00000070487 Arhgef28P97433 1693 aa35.54■■■■□ 3.28
Cpsf4-201ENSMUST00000070487 Slit3Q9WVB4 1523 aa35.51■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Shq1Q7TMX5 569 aa35.49■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Rims1Q99NE5 1463 aa35.48■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Asxl2Q8BZ32 1370 aa35.48■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Tulp4Q9JIL5 1547 aa35.48■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Q9D9H8 365 aa35.47■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Myom1Q62234 1667 aaKnown RBP35.47■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Setd1aE9PYH6 1716 aa35.47■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Gli3Q61602 1583 aa35.47■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Adamts13Q769J6 1426 aa35.45■■■■□ 3.27
Cpsf4-201ENSMUST00000070487 Ifit1bl1D3Z6F0 470 aa35.44■■■■□ 3.26
Cpsf4-201ENSMUST00000070487 Slc52a2Q9D8F3 450 aa35.43■■■■□ 3.26
Cpsf4-201ENSMUST00000070487 Tubgcp6G5E8P0 1769 aa35.42■■■■□ 3.26
Cpsf4-201ENSMUST00000070487 Pik3r4Q8VD65 1358 aa35.39■■■■□ 3.26
Cpsf4-201ENSMUST00000070487 Kdm2aP59997 1161 aa35.36■■■■□ 3.25
Cpsf4-201ENSMUST00000070487 Srpk2O54781 681 aaKnown RBP35.35■■■■□ 3.25
Cpsf4-201ENSMUST00000070487 Thsd7aQ69ZU6 1645 aa35.34■■■■□ 3.25
Cpsf4-201ENSMUST00000070487 Grwd1Q810D6 446 aaKnown RBP35.33■■■■□ 3.25
Cpsf4-201ENSMUST00000070487 Os9Q8K2C7 672 aa35.3■■■■□ 3.24
Cpsf4-201ENSMUST00000070487 Cep152A2AUM9 1736 aaKnown RBP35.28■■■■□ 3.24
Cpsf4-201ENSMUST00000070487 Gm20521D3Z5F7 333 aa35.27■■■■□ 3.24
Cpsf4-201ENSMUST00000070487 Fan1Q69ZT1 1020 aa35.27■■■■□ 3.24
Cpsf4-201ENSMUST00000070487 Cdk13Q69ZA1 1511 aaKnown RBP35.25■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Arap3Q8R5G7 1538 aa35.25■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 MaddQ80U28 1577 aa35.25■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Neurod1Q60867 357 aa35.24■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Polr3aB2RXC6 1390 aa35.22■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Tns3Q5SSZ5 1440 aa35.22■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Puf60Q3UEB3 564 aaKnown RBP35.21■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 NefmP08553 848 aa35.21■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 HnrnpmQ9D0E1 729 aaKnown RBP35.21■■■■□ 3.23
Cpsf4-201ENSMUST00000070487 Fbxo41Q6NS60 873 aa35.19■■■■□ 3.22
Cpsf4-201ENSMUST00000070487 Utp14aQ640M1 767 aaKnown RBP35.15■■■■□ 3.22
Cpsf4-201ENSMUST00000070487 Stk26Q99JT2 416 aa35.15■■■■□ 3.22
Cpsf4-201ENSMUST00000070487 Cpsf1Q9EPU4 1441 aaKnown RBP35.14■■■■□ 3.22
Cpsf4-201ENSMUST00000070487 Col18a1P39061 1774 aa35.13■■■■□ 3.22
Cpsf4-201ENSMUST00000070487 Amigo3Q8C2S7 508 aa35.11■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Mbd5B1AYB6 1498 aa35.11■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Hspa1lP16627 641 aa35.1■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Slain2Q8CI08 581 aa35.1■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Cdk5rap2Q8K389 1822 aa35.09■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Iqsec2Q5DU25 1478 aa35.09■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Cps1Q8C196 1500 aa35.09■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Lrrc7Q80TE7 1490 aa35.08■■■■□ 3.21
Cpsf4-201ENSMUST00000070487 Acin1Q9JIX8 1338 aaKnown RBP35.05■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 Tmem94Q7TSH8 1360 aa35.03■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 IqubQ8CDK3 788 aa35.03■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 Evi5lH3BKQ3 813 aa35.02■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 Unc13bQ9Z1N9 1602 aa35.01■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 Mug2P28666 1451 aa35.01■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 TonslQ6NZL6 1363 aa35.01■■■■□ 3.2
Cpsf4-201ENSMUST00000070487 Plekhg1F6S200 1446 aa35■■■■□ 3.19
Cpsf4-201ENSMUST00000070487 Bcl11bQ99PV8 884 aa35■■■■□ 3.19
Cpsf4-201ENSMUST00000070487 Usp40Q8BWR4 1235 aa34.99■■■■□ 3.19
Cpsf4-201ENSMUST00000070487 Ift172Q6VH22 1749 aa34.99■■■■□ 3.19
Cpsf4-201ENSMUST00000070487 Brinp3Q499E0 766 aa34.98■■■■□ 3.19
Cpsf4-201ENSMUST00000070487 Stag3O70576 1240 aa34.94■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Stard8Q8K031 1019 aa34.94■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Cep170bQ80U49 1574 aa34.93■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Col14a1Q80X19 1797 aa34.92■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Sipa1l1Q8C0T5 1782 aa34.92■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Q3UJC8 639 aa34.91■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Nwd1A6H603 1563 aa34.9■■■■□ 3.18
Cpsf4-201ENSMUST00000070487 Nphp4P59240 1425 aa34.88■■■■□ 3.17
Cpsf4-201ENSMUST00000070487 Dapk1Q80YE7 1442 aa34.88■■■■□ 3.17
Cpsf4-201ENSMUST00000070487 Atf3Q60765 181 aa34.87■■■■□ 3.17
Cpsf4-201ENSMUST00000070487 Gtf2e1Q9D0D5 440 aa34.87■■■■□ 3.17
Cpsf4-201ENSMUST00000070487 Rundc1Q0VDN7 615 aa34.86■■■■□ 3.17
Cpsf4-201ENSMUST00000070487 DnmbpQ6TXD4 1580 aa34.85■■■■□ 3.17
Retrieved 100 of 22,080 RNA–protein pairs in 6.4 ms