RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Pip4k2bQ80XI4 416 aa15.06■□□□□ 0
Shtn1-201ENSMUST00000047511 Hsp90b1P08113 802 aaKnown RBP15.05■□□□□ 0
Shtn1-201ENSMUST00000047511 BC005561E9Q5E2 1589 aa15.05■□□□□ -0
Shtn1-201ENSMUST00000047511 Cc2d1aQ8K1A6 943 aa15.04■□□□□ -0
Shtn1-201ENSMUST00000047511 Map7O88735 730 aa15.04■□□□□ -0
Shtn1-201ENSMUST00000047511 GorabQ8BRM2 368 aa15.04■□□□□ -0
Shtn1-201ENSMUST00000047511 Stk31Q99MW1 1018 aa15.04■□□□□ -0
Shtn1-201ENSMUST00000047511 Nectin2P32507 530 aa15.03■□□□□ -0
Shtn1-201ENSMUST00000047511 Trim44Q9QXA7 346 aa15.02■□□□□ -0
Shtn1-201ENSMUST00000047511 AU015836B2RUM3 263 aa15.02■□□□□ -0
Shtn1-201ENSMUST00000047511 Mfap1aC0HKD8 439 aaKnown RBP15.02■□□□□ -0
Shtn1-201ENSMUST00000047511 Mfap1bC0HKD9 439 aaKnown RBP15.02■□□□□ -0
Shtn1-201ENSMUST00000047511 Pank1Q8K4K6 548 aa15.02■□□□□ -0
Shtn1-201ENSMUST00000047511 Ggt6Q6PDE7 497 aa15.02□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Nutm1Q8BHP2 1126 aa15.01□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Zfp777B9EKF4 885 aa15.01□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Ttc21bQ0HA38 1315 aa15□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Chmp4bQ9D8B3 224 aaKnown RBP15□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Znf692Q3U381 531 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Plekhg5Q66T02 1073 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Trappc8E9PWG2 1437 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Atp10dQ8K2X1 1416 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Ralbp1Q62172 648 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 PrxO55103 1391 aa14.99□□□□□ -0.01
Shtn1-201ENSMUST00000047511 G3bp1P97855 465 aaKnown RBP14.98□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Dnai1Q8C0M8 701 aa14.98□□□□□ -0.01
Shtn1-201ENSMUST00000047511 KnstrnQ9D9Z1 312 aaKnown RBP14.98□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Kdm5bQ80Y84 1544 aa14.98□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Naip5Q9R016 1403 aa14.98□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Igf1rQ60751 1373 aa14.97□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Ccdc146E9Q9F7 977 aa14.97□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Pak3Q61036 559 aa14.97□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Kif16bB1AVY7 1312 aa14.96□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Zranb1Q7M760 708 aa14.96□□□□□ -0.01
Shtn1-201ENSMUST00000047511 Q8BT18 775 aa14.96□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Dnttip2Q8R2M2 758 aaKnown RBP14.96□□□□□ -0.02
Shtn1-201ENSMUST00000047511 HnrnpmQ9D0E1 729 aaKnown RBP14.96□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Cdk19Q8BWD8 501 aa14.95□□□□□ -0.02
Shtn1-201ENSMUST00000047511 HnrnpuQ8VEK3 800 aaKnown RBP14.94□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Clstn1Q9EPL2 979 aa14.93□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Ipo8Q7TMY7 1010 aa14.93□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Usp16Q99LG0 825 aa14.92□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Mlh3A0A1Y7VMP7 1443 aa14.92□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Nup160Q9Z0W3 1402 aaKnown RBP14.92□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Shroom2A2ALU4 1481 aa14.92□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Rab3gap2Q8BMG7 1366 aa14.91□□□□□ -0.02
Shtn1-201ENSMUST00000047511 CatipB9EKE5 520 aa14.91□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Htatsf1Q8BGC0 757 aa14.91□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Ipo9Q91YE6 1041 aa14.91□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Rprd2Q6NXI6 1469 aaKnown RBP14.91□□□□□ -0.02
Shtn1-201ENSMUST00000047511 L3mbtl2P59178 703 aa14.9□□□□□ -0.02
Shtn1-201ENSMUST00000047511 MpripP97434 1024 aa14.9□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Sart3Q9JLI8 962 aaKnown RBP14.9□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Fyb1O35601 819 aa14.9□□□□□ -0.02
Shtn1-201ENSMUST00000047511 Gapvd1Q6PAR5 1458 aa14.89□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Rbm25B2RY56 838 aaKnown RBP14.89□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Cyb5rlB1AS42 316 aa14.89□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Trim58Q5NCC9 485 aa14.89□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Arhgef40Q3UPH7 1517 aa14.88□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Triml2E9PW10 424 aa14.88□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Bcl2l13P59017 434 aa14.88□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Slc4a10Q5DTL9 1118 aa14.87□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Abca5Q8K448 1642 aa14.87□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Dusp27Q148W8 1138 aa14.87□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Peg3Q3URU2 1571 aa14.87□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Prex2Q3LAC4 1598 aa14.87□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Ubap1lG3UW59 384 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Bcl11bQ99PV8 884 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Rfx7F8VPJ6 1459 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Swt1Q9DBQ9 907 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 FanciQ8K368 1330 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Lrriq1Q0P5X1 1673 aa14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 HdgfP51859 237 aaKnown RBP14.86□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Fancd2Q80V62 1450 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Brpf1B2RRD7 1212 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 KarsQ99MN1 595 aaKnown RBP14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Pes1Q9EQ61 584 aaKnown RBP14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Lmtk2Q3TYD6 1471 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Abcc1O35379 1528 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Evi5lH3BKQ3 813 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Rassf8Q8CJ96 419 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Adamts12Q811B3 1600 aa14.85□□□□□ -0.03
Shtn1-201ENSMUST00000047511 PtmaP26350 111 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Atxn3Q9CVD2 355 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Tnnt2P50752 301 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Sh3bp5Q9Z131 463 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Adgrb2Q8CGM1 1561 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Ncoa1P70365 1447 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Caskin1Q6P9K8 1431 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 TatQ8QZR1 454 aa14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Eif2s2Q99L45 331 aaKnown RBP14.84□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Ttll13A4Q9F6 804 aa14.83□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Chmp3Q9CQ10 224 aa14.83□□□□□ -0.03
Shtn1-201ENSMUST00000047511 Atp7aQ64430 1491 aa14.83□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Cald1E9QA15 768 aaKnown RBP14.83□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Cabp2Q9JLK4 216 aa14.83□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Ak7Q9D2H2 614 aa14.83□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Rapgef6Q5NCJ1 1609 aa14.83□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Ric3Q8BPM6 367 aa14.82□□□□□ -0.04
Shtn1-201ENSMUST00000047511 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms