RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Gm20521D3Z5F7 333 aa23.45■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Stard8Q8K031 1019 aa23.45■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Uggt1Q6P5E4 1551 aa23.45■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Srpk2O54781 681 aaKnown RBP23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Myom2Q14BI5 1463 aa23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Prdm2A2A7B5 1709 aaKnown RBP23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Setd1aE9PYH6 1716 aa23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Afap1Q80YS6 731 aa23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Smg6P61406 1418 aaKnown RBP23.44■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Hfm1D3Z4R1 1434 aa23.43■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Rims1Q99NE5 1463 aa23.41■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Qser1A2BIE1 1698 aa23.4■■□□□ 1.34
Rpf1-201ENSMUST00000029838 Stra8P70278 393 aa23.38■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Skint5A7XUY5 1461 aa23.38■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Srcin1Q9QWI6 1250 aa23.38■■□□□ 1.33
Rpf1-201ENSMUST00000029838 CltcQ68FD5 1675 aaKnown RBP23.36■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Mroh1E0CZ22 1640 aa23.35■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Gm13695A2AK44 830 aa23.33■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Plxnc1Q9QZC2 1574 aa23.33■■□□□ 1.33
Rpf1-201ENSMUST00000029838 Dnajc5P60904 198 aa23.32■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Gtf2e1Q9D0D5 440 aa23.32■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Ahdc1Q6PAL7 1594 aaKnown RBP23.31■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Fan1Q69ZT1 1020 aa23.31■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Slc52a2Q9D8F3 450 aa23.31■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Arid4bA2CG63 1314 aaKnown RBP23.31■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Myo3aQ8K3H5 1613 aa23.3■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Slc24a1Q91WD8 1130 aa23.29■■□□□ 1.32
Rpf1-201ENSMUST00000029838 RictorQ6QI06 1708 aa23.29■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Arhgap23Q69ZH9 1483 aa23.27■■□□□ 1.32
Rpf1-201ENSMUST00000029838 Zbtb4Q5F293 982 aa23.26■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Usp40Q8BWR4 1235 aa23.26■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Nphp4P59240 1425 aa23.26■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Puf60Q3UEB3 564 aaKnown RBP23.25■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Cdk5rap2Q8K389 1822 aa23.25■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Safb2Q80YR5 991 aaKnown RBP23.25■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Pola1P33609 1465 aa23.24■■□□□ 1.31
Rpf1-201ENSMUST00000029838 Prrc2bQ7TPM1 1486 aaKnown RBP23.24■■□□□ 1.31
Rpf1-201ENSMUST00000029838 AU022751B1B0V2 589 aa23.24■■□□□ 1.31
Rpf1-201ENSMUST00000029838 IqubQ8CDK3 788 aa23.22■■□□□ 1.31
Rpf1-201ENSMUST00000029838 DnmbpQ6TXD4 1580 aa23.19■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Adamtsl3G3UXC7 1706 aa23.19■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Sbno1Q689Z5 1390 aa23.19■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Itsn2Q9Z0R6 1659 aa23.18■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Plppr3Q7TPB0 716 aa23.18■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Anp32bQ9EST5 272 aaKnown RBP23.18■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Sipa1l1Q8C0T5 1782 aa23.17■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Tmf1B9EKI3 1091 aa23.16■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Atp1b4Q99ME6 356 aa23.16■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Med14A2ABV5 1459 aaKnown RBP23.15■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Stag3O70576 1240 aa23.15■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Myom1Q62234 1667 aaKnown RBP23.15■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Kif13aQ9EQW7 1749 aa23.15■■□□□ 1.3
Rpf1-201ENSMUST00000029838 Dnajc5gQ8C632 165 aa23.14■■□□□ 1.29
Rpf1-201ENSMUST00000029838 PalldQ9ET54 1408 aa23.14■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Naip7Q9JIB3 1402 aa23.14■■□□□ 1.29
Rpf1-201ENSMUST00000029838 PtprmP28828 1452 aa23.13■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Lrrc7Q80TE7 1490 aa23.13■■□□□ 1.29
Rpf1-201ENSMUST00000029838 NrdcQ8BHG1 1161 aa23.13■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Itsn1Q9Z0R4 1714 aa23.12■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Pank3Q8R2W9 370 aa23.12■■□□□ 1.29
Rpf1-201ENSMUST00000029838 PrxO55103 1391 aa23.12■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Tubgcp6G5E8P0 1769 aa23.11■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Mrs2Q5NCE8 434 aa23.11■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Shq1Q7TMX5 569 aa23.1■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Anks4bQ8K3X6 423 aa23.1■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Kdm5aQ3UXZ9 1690 aa23.1■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Exoc6Q8R313 802 aa23.09■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Wwc2Q6NXJ0 1187 aa23.09■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Ercc6l2Q9JIM3 1537 aa23.08■■□□□ 1.29
Rpf1-201ENSMUST00000029838 Zc3h13E9Q784 1729 aaKnown RBP23.07■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Fam184bQ0KK56 942 aa23.06■■□□□ 1.28
Rpf1-201ENSMUST00000029838 CenpjQ569L8 1344 aa23.06■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Slc4a1apE9PX68 744 aa23.06■■□□□ 1.28
Rpf1-201ENSMUST00000029838 P3h3Q8CG70 732 aa23.06■■□□□ 1.28
Rpf1-201ENSMUST00000029838 PnisrA2AJT4 805 aaKnown RBP23.05■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Pcdh10E9PXQ7 1057 aa23.05■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Zscan10Q3URR7 782 aa23.04■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Arhgef28P97433 1693 aa23.04■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Eif2ak4Q9QZ05 1648 aa23.04■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Ift172Q6VH22 1749 aa23.03■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Inpp5dQ9ES52 1191 aa23.03■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Psme1P97371 249 aa23.03■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Txndc2Q6P902 515 aa23.02■■□□□ 1.28
Rpf1-201ENSMUST00000029838 Gemin5Q8BX17 1502 aaKnown RBP23.01■■□□□ 1.27
Rpf1-201ENSMUST00000029838 PplQ9R269 1755 aa23■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Q9D9H8 365 aa23■■□□□ 1.27
Rpf1-201ENSMUST00000029838 MaddQ80U28 1577 aa22.99■■□□□ 1.27
Rpf1-201ENSMUST00000029838 InsrP15208 1372 aa22.99■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Stk26Q99JT2 416 aa22.99■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Chd2E9PZM4 1827 aaKnown RBP22.98■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Gm16486A0A1D5RMD1 1434 aa22.97■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Plekhg1F6S200 1446 aa22.97■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Utp14aQ640M1 767 aaKnown RBP22.96■■□□□ 1.27
Rpf1-201ENSMUST00000029838 Slc4a2P13808 1237 aaKnown RBP22.95■■□□□ 1.26
Rpf1-201ENSMUST00000029838 Dip2aQ8BWT5 1523 aa22.92■■□□□ 1.26
Rpf1-201ENSMUST00000029838 Tnnt3Q9QZ47 272 aa22.92■■□□□ 1.26
Rpf1-201ENSMUST00000029838 Dip2bQ3UH60 1574 aa22.9■■□□□ 1.26
Rpf1-201ENSMUST00000029838 Exosc9Q9JHI7 438 aaKnown RBP22.87■■□□□ 1.25
Rpf1-201ENSMUST00000029838 Bcl9Q9D219 1425 aa22.86■■□□□ 1.25
Rpf1-201ENSMUST00000029838 MyclP10166 368 aa22.84■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms