RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 March6Q6ZQ89 909 aa16.88■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Znf526Q8BI66 675 aa16.87■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Wdr78E9PYY5 807 aa16.87■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Hdgfl1Q2VPR5 283 aa16.87■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Nup155Q99P88 1391 aaKnown RBP16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Pibf1E9Q6K3 756 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Cdkn1cP49919 348 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 CenpjQ569L8 1344 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Kif7B7ZNG0 1348 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Rab11fip3Q8CHD8 1047 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Ddx11Q6AXC6 880 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Rsph4aQ8BYM7 716 aa16.86■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Aebp1Q640N1 1128 aa16.85■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Fam43aQ8BUP8 424 aa16.85■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Ak7Q9D2H2 614 aa16.84■□□□□ 0.29
Col5a1-201ENSMUST00000028280 UacaQ8CGB3 1411 aa16.83■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Ggt6Q6PDE7 497 aa16.83■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Ppp1r18Q8BQ30 594 aa16.83■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Hnrnpul1Q8VDM6 859 aaKnown RBP16.83■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Cep112Q5PR68 954 aa16.83■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Rnf20Q5DTM8 973 aa16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Sin3aQ60520 1274 aaKnown RBP16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Polr1aO35134 1717 aaKnown RBP16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 AknaQ80VW7 1404 aa16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 AppP12023 770 aa16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Ubxn4Q8VCH8 506 aa16.82■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Gbp4Q61107 620 aa16.81■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Smc3Q9CW03 1217 aaKnown RBP16.81■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Lemd3Q9WU40 921 aa16.81■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Ccar2Q8VDP4 922 aaKnown RBP16.81■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Tceal9Q9DD24 104 aa16.8■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Rabep1O35551 862 aa16.8■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Erlin2Q8BFZ9 340 aa16.8■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Rock1P70335 1354 aa16.79■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Txndc2Q6P902 515 aa16.79■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Cux1P53564 1515 aa16.79■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Kif16bB1AVY7 1312 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Phactr2B1AVP0 632 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Smc4Q8CG47 1286 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Ccp110Q7TSH4 1004 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Ppm1eQ80TL0 749 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Tmco3Q8BH01 678 aa16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 PhaxQ9JJT9 385 aaKnown RBP16.78■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Cabp1Q9JLK7 227 aa16.77■□□□□ 0.28
Col5a1-201ENSMUST00000028280 OptnQ8K3K8 584 aa16.77■□□□□ 0.28
Col5a1-201ENSMUST00000028280 Eif2s2Q99L45 331 aaKnown RBP16.77■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Rbm10Q99KG3 930 aaKnown RBP16.76■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Mad1l1Q9WTX8 717 aaKnown RBP16.76■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Gprasp1Q5U4C1 1347 aa16.76■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Tsen2Q6P7W5 460 aa16.76■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Stk31Q99MW1 1018 aa16.76■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Ap3b2Q9JME5 1082 aa16.75■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Cttnbp2B9EJA2 1648 aa16.75■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Sox12Q04890 314 aa16.75■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Commd10Q8JZY2 202 aa16.74■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Kiaa0753Q6A000 959 aa16.74■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Fnbp4Q6ZQ03 1031 aa16.74■□□□□ 0.27
Col5a1-201ENSMUST00000028280 TimelessQ9R1X4 1197 aa16.74■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Usp47Q8BY87 1376 aa16.73■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Trim29Q8R2Q0 587 aa16.73■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Ppp4r3bQ922R5 820 aa16.73■□□□□ 0.27
Col5a1-201ENSMUST00000028280 FosbP13346 338 aa16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Pds5bQ4VA53 1446 aaKnown RBP16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Rnf214Q8BFU3 668 aaKnown RBP16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Dhx16G3X8X0 1044 aaKnown RBP16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Ccdc60Q8C4J0 545 aa16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 Ccdc88bQ4QRL3 1481 aa16.72■□□□□ 0.27
Col5a1-201ENSMUST00000028280 PogkQ80TC5 607 aa16.7■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Ciz1Q8VEH2 845 aa16.7■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Trim30cD3YVI9 513 aa16.7■□□□□ 0.26
Col5a1-201ENSMUST00000028280 NefhP19246 1090 aa16.7■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Chmp4cQ9D7F7 232 aa16.7■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Znf704Q9ERQ3 566 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 G3bp1P97855 465 aaKnown RBP16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Cchcr1Q8K2I2 770 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 PdcQ9QW08 244 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Pank3Q8R2W9 370 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 SelenooQ9DBC0 667 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 GsdmaQ9EST1 446 aa16.69■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Dhx8A2A4P0 1244 aaKnown RBP16.68■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Smc2Q8CG48 1191 aaKnown RBP16.68■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Spata24Q6P926 205 aa16.68■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Nop14Q8R3N1 860 aaKnown RBP16.68■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Usp48Q3V0C5 1052 aa16.68■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Map9Q3TRR0 646 aa16.67■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Atl3Q91YH5 541 aa16.67■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Cep89Q9CZX2 791 aa16.67■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Trim58Q5NCC9 485 aa16.67■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Cc2d1aQ8K1A6 943 aa16.67■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Cfap99A0A140LIX9 648 aa16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 CrcpO35427 148 aa16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Ccdc181Q80ZU5 509 aa16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Luc7lQ9CYI4 371 aaKnown RBP16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Arglu1Q3UL36 271 aaKnown RBP16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 TxlnbQ8VBT1 685 aa16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Ccdc83Q9D4V3 305 aa16.66■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Bag1Q60739 355 aa16.65■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Gtf2f1Q3THK3 508 aaKnown RBP16.65■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Cc2d2aQ8CFW7 1633 aa16.65■□□□□ 0.26
Col5a1-201ENSMUST00000028280 Lrrcc1Q69ZB0 1026 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms