RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Znf518aB2RRF6 1478 aaKnown RBP14.74□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Anp32bQ9EST5 272 aaKnown RBP14.74□□□□□ -0.05
Ldb3-202ENSMUST00000022328 PrxO55103 1391 aa14.73□□□□□ -0.05
Ldb3-202ENSMUST00000022328 AnkarA2RT91 1465 aa14.73□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Zmym4A2A791 1549 aaKnown RBP14.73□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Tmem131lQ3U3D7 1597 aa14.73□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Rpgrip1lQ8CG73 1264 aa14.72□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Pank3Q8R2W9 370 aa14.72□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Sbno1Q689Z5 1390 aa14.72□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Fndc1E9Q043 1732 aa14.72□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Arid3cA6PWV5 409 aa14.71□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Ttc21bQ0HA38 1315 aa14.71□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Zbtb4Q5F293 982 aa14.71□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Ecm2Q5FW85 670 aa14.71□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Erich6D3Z6S9 713 aa14.71□□□□□ -0.05
Ldb3-202ENSMUST00000022328 P3h3Q8CG70 732 aa14.7□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Pola1P33609 1465 aa14.7□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Arid4bA2CG63 1314 aaKnown RBP14.7□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Upf2A2AT37 1269 aaKnown RBP14.7□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Sall3Q62255 1320 aa14.69□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Zscan21Q07231 555 aa14.69□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Srcin1Q9QWI6 1250 aa14.69□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Abca6Q8K441 1624 aa14.68□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Tmf1B9EKI3 1091 aa14.68□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Inpp5dQ9ES52 1191 aa14.68□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Topbp1Q6ZQF0 1515 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Zscan10Q3URR7 782 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Ccdc27Q3V036 639 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Pak3Q61036 559 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Liat1Q810M6 228 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Ttbk1Q6PCN3 1308 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 ErbinQ80TH2 1402 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Plch2A2AP18 1501 aa14.67□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Iqgap3F8VQ29 1632 aa14.66□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Kdm2aP59997 1161 aa14.66□□□□□ -0.06
Ldb3-202ENSMUST00000022328 L3mbtl2P59178 703 aa14.65□□□□□ -0.06
Ldb3-202ENSMUST00000022328 OvosQ3UU35 1456 aa14.65□□□□□ -0.06
Ldb3-202ENSMUST00000022328 Q7TT23 1179 aa14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Mak16Q8BGS0 296 aaKnown RBP14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Cep152A2AUM9 1736 aaKnown RBP14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Abca8aQ8K442 1620 aa14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Gm16486A0A1D5RMD1 1434 aa14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Tex14Q7M6U3 1450 aa14.64□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Atp10aO54827 1508 aa14.63□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Egfem1Q8C088 590 aa14.63□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Rims1Q99NE5 1463 aa14.62□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Kank1E9Q238 1360 aa14.62□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Depdc5P61460 1591 aa14.62□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Stard8Q8K031 1019 aa14.62□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Prex1Q69ZK0 1650 aa14.62□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Gm20521D3Z5F7 333 aa14.61□□□□□ -0.07
Ldb3-202ENSMUST00000022328 AatkQ80YE4 1365 aa14.61□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Itsn2Q9Z0R6 1659 aa14.61□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Ccdc9Q8VC31 543 aaKnown RBP14.61□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Fam184bQ0KK56 942 aa14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Pabpn1Q8CCS6 302 aaKnown RBP14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Stk24Q99KH8 431 aa14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Riok3Q9DBU3 519 aaKnown RBP14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Trpm1Q2TV84 1622 aa14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Zfp444Q3TDV8 331 aaKnown RBP14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 AglF8VPN4 1532 aa14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Adgrb3Q80ZF8 1522 aa14.6□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Dnajc5P60904 198 aa14.59□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Gtf2e1Q9D0D5 440 aa14.58□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Myo3aQ8K3H5 1613 aa14.58□□□□□ -0.07
Ldb3-202ENSMUST00000022328 Gli2Q0VGT2 1544 aa14.58□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Col17a1Q07563 1470 aa14.58□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Nphp4P59240 1425 aa14.58□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Os9Q8K2C7 672 aa14.58□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Tecpr2Q3UH45 1423 aa14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Srpk2O54781 681 aaKnown RBP14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Gtf3c3Q3TMP1 882 aa14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Myom2Q14BI5 1463 aa14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Cdc42bpgQ80UW5 1551 aa14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Efcab6Q6P1E8 1516 aa14.57□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Erbb3Q61526 1339 aa14.56□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Ppp2r1aQ76MZ3 589 aa14.56□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Usp40Q8BWR4 1235 aa14.56□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Ehbp1l1Q99MS7 1716 aa14.56□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Rab3gap2Q8BMG7 1366 aa14.56□□□□□ -0.08
Ldb3-202ENSMUST00000022328 C1qtnf12Q8R2Z0 308 aa14.55□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Ptch1Q61115 1434 aa14.55□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Fan1Q69ZT1 1020 aa14.55□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Akap12Q9WTQ5 1684 aa14.54□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Cdk5rap2Q8K389 1822 aa14.54□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Atf7ipQ7TT18 1306 aa14.54□□□□□ -0.08
Ldb3-202ENSMUST00000022328 DnmbpQ6TXD4 1580 aa14.53□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Styxl1Q9DAR2 321 aa14.53□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Ipo9Q91YE6 1041 aa14.52□□□□□ -0.08
Ldb3-202ENSMUST00000022328 Mink1Q9JM52 1308 aa14.52□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Clasp1Q80TV8 1535 aaKnown RBP14.52□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Fgd1P52734 960 aa14.52□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Gm156Q58A37 223 aa14.52□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Ino80Q6ZPV2 1559 aa14.51□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Uggt1Q6P5E4 1551 aa14.51□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Dip2cE9PWR4 1557 aa14.5□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Kdm5aQ3UXZ9 1690 aa14.5□□□□□ -0.09
Ldb3-202ENSMUST00000022328 RereQ80TZ9 1558 aa14.5□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Kiaa0556Q8C753 1610 aa14.5□□□□□ -0.09
Ldb3-202ENSMUST00000022328 Esx1O88933 382 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms