RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 PrxO55103 1391 aa19.19■□□□□ 0.66
Usp43-201ENSMUST00000021288 Casc1Q6TDU8 730 aa19.18■□□□□ 0.66
Usp43-201ENSMUST00000021288 Clstn1Q9EPL2 979 aa19.18■□□□□ 0.66
Usp43-201ENSMUST00000021288 Pes1Q9EQ61 584 aaKnown RBP19.18■□□□□ 0.66
Usp43-201ENSMUST00000021288 Erich6bQ9D4S6 220 aa19.17■□□□□ 0.66
Usp43-201ENSMUST00000021288 Ccdc141E9Q8Q6 1531 aa19.17■□□□□ 0.66
Usp43-201ENSMUST00000021288 Grin2aP35436 1464 aa19.17■□□□□ 0.66
Usp43-201ENSMUST00000021288 Zfp777B9EKF4 885 aa19.17■□□□□ 0.66
Usp43-201ENSMUST00000021288 Triml2E9PW10 424 aa19.16■□□□□ 0.66
Usp43-201ENSMUST00000021288 Gsto1O09131 240 aa19.15■□□□□ 0.66
Usp43-201ENSMUST00000021288 Rab3gap2Q8BMG7 1366 aa19.15■□□□□ 0.66
Usp43-201ENSMUST00000021288 Neo1P97798 1493 aa19.15■□□□□ 0.66
Usp43-201ENSMUST00000021288 Rassf8Q8CJ96 419 aa19.14■□□□□ 0.66
Usp43-201ENSMUST00000021288 Pcmtd1P59913 357 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 Gm1043A0A140LJC2 1431 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 SlkO54988 1233 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 Chmp4cQ9D7F7 232 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 Crocc2F6XLV1 1638 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 Sh3bp5Q9Z131 463 aa19.14■□□□□ 0.65
Usp43-201ENSMUST00000021288 Gm14025A2AP89 1413 aa19.13■□□□□ 0.65
Usp43-201ENSMUST00000021288 Brpf1B2RRD7 1212 aa19.13■□□□□ 0.65
Usp43-201ENSMUST00000021288 MccE9PWI3 1003 aa19.13■□□□□ 0.65
Usp43-201ENSMUST00000021288 Rbm25B2RY56 838 aaKnown RBP19.13■□□□□ 0.65
Usp43-201ENSMUST00000021288 Usp16Q99LG0 825 aa19.13■□□□□ 0.65
Usp43-201ENSMUST00000021288 Gpatch8A2A6A1 1505 aa19.12■□□□□ 0.65
Usp43-201ENSMUST00000021288 Ylpm1Q9R0I7 1386 aaKnown RBP19.12■□□□□ 0.65
Usp43-201ENSMUST00000021288 Gm21190A0A0G2JGJ6 266 aa19.12■□□□□ 0.65
Usp43-201ENSMUST00000021288 Ap3b2Q9JME5 1082 aa19.12■□□□□ 0.65
Usp43-201ENSMUST00000021288 Plekhh1Q80TI1 1356 aa19.11■□□□□ 0.65
Usp43-201ENSMUST00000021288 Ccdc183A2AJB1 534 aa19.1■□□□□ 0.65
Usp43-201ENSMUST00000021288 Slc4a10Q5DTL9 1118 aa19.1■□□□□ 0.65
Usp43-201ENSMUST00000021288 Magi1Q6RHR9 1471 aa19.1■□□□□ 0.65
Usp43-201ENSMUST00000021288 Ncoa3O09000 1398 aa19.1■□□□□ 0.65
Usp43-201ENSMUST00000021288 Stk11ipQ3TAA7 1072 aa19.09■□□□□ 0.65
Usp43-201ENSMUST00000021288 Afap1Q80YS6 731 aa19.09■□□□□ 0.65
Usp43-201ENSMUST00000021288 Ncoa1P70365 1447 aa19.09■□□□□ 0.65
Usp43-201ENSMUST00000021288 AU015836B2RUM3 263 aa19.09■□□□□ 0.65
Usp43-201ENSMUST00000021288 Eif4g2Q62448 906 aaKnown RBP19.09■□□□□ 0.65
Usp43-201ENSMUST00000021288 Tspyl2Q7TQI8 677 aa19.08■□□□□ 0.64
Usp43-201ENSMUST00000021288 CgnP59242 1191 aa19.06■□□□□ 0.64
Usp43-201ENSMUST00000021288 Dusp27Q148W8 1138 aa19.06■□□□□ 0.64
Usp43-201ENSMUST00000021288 Thoc2B1AZI6 1594 aaKnown RBP19.06■□□□□ 0.64
Usp43-201ENSMUST00000021288 Rprd2Q6NXI6 1469 aaKnown RBP19.05■□□□□ 0.64
Usp43-201ENSMUST00000021288 MecomP14404 1042 aa19.05■□□□□ 0.64
Usp43-201ENSMUST00000021288 Atxn3Q9CVD2 355 aa19.05■□□□□ 0.64
Usp43-201ENSMUST00000021288 Ric3Q8BPM6 367 aa19.05■□□□□ 0.64
Usp43-201ENSMUST00000021288 Swt1Q9DBQ9 907 aa19.04■□□□□ 0.64
Usp43-201ENSMUST00000021288 Mre11Q61216 706 aa19.04■□□□□ 0.64
Usp43-201ENSMUST00000021288 BC005561E9Q5E2 1589 aa19.02■□□□□ 0.64
Usp43-201ENSMUST00000021288 CatipB9EKE5 520 aa19.02■□□□□ 0.63
Usp43-201ENSMUST00000021288 MpripP97434 1024 aa19■□□□□ 0.63
Usp43-201ENSMUST00000021288 Iffo2Q8R2V2 512 aa19■□□□□ 0.63
Usp43-201ENSMUST00000021288 Chmp3Q9CQ10 224 aa18.99■□□□□ 0.63
Usp43-201ENSMUST00000021288 CrebrfQ8CDG5 640 aaKnown RBP18.99■□□□□ 0.63
Usp43-201ENSMUST00000021288 Rsph4aQ8BYM7 716 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Q9D2X8 372 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Gtf3c3Q3TMP1 882 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Zranb1Q7M760 708 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 PrkcshO08795 521 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Bcl2l13P59017 434 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Tnpo1Q8BFY9 898 aaKnown RBP18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Nek4Q9Z1J2 792 aa18.98■□□□□ 0.63
Usp43-201ENSMUST00000021288 Cdk19Q8BWD8 501 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 PxdnQ3UQ28 1475 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Ttc21bQ0HA38 1315 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Cavin4A2AMM0 362 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Gnai1B2RSH2 354 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Gnai3Q9DC51 354 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Samd9lQ69Z37 1561 aa18.97■□□□□ 0.63
Usp43-201ENSMUST00000021288 Cald1E9QA15 768 aaKnown RBP18.96■□□□□ 0.63
Usp43-201ENSMUST00000021288 Cabp2Q9JLK4 216 aa18.95■□□□□ 0.62
Usp43-201ENSMUST00000021288 Phactr2B1AVP0 632 aa18.94■□□□□ 0.62
Usp43-201ENSMUST00000021288 Rabep1O35551 862 aa18.94■□□□□ 0.62
Usp43-201ENSMUST00000021288 Rsph3aQ3UFY4 516 aa18.94■□□□□ 0.62
Usp43-201ENSMUST00000021288 Q8BT18 775 aa18.94■□□□□ 0.62
Usp43-201ENSMUST00000021288 Atl3Q91YH5 541 aa18.93■□□□□ 0.62
Usp43-201ENSMUST00000021288 Rfx7F8VPJ6 1459 aa18.93■□□□□ 0.62
Usp43-201ENSMUST00000021288 Cgnl1Q6AW69 1298 aa18.92■□□□□ 0.62
Usp43-201ENSMUST00000021288 Polr3aB2RXC6 1390 aa18.92■□□□□ 0.62
Usp43-201ENSMUST00000021288 Ppp2r3aB2RXC8 1150 aa18.91■□□□□ 0.62
Usp43-201ENSMUST00000021288 Nol12Q8BG17 217 aa18.91■□□□□ 0.62
Usp43-201ENSMUST00000021288 PalmQ9Z0P4 383 aa18.9■□□□□ 0.62
Usp43-201ENSMUST00000021288 Cog6Q8R3I3 657 aa18.9■□□□□ 0.62
Usp43-201ENSMUST00000021288 FanciQ8K368 1330 aa18.9■□□□□ 0.62
Usp43-201ENSMUST00000021288 Pik3c2gO70167 1506 aa18.9■□□□□ 0.62
Usp43-201ENSMUST00000021288 SkilQ60665 675 aa18.89■□□□□ 0.61
Usp43-201ENSMUST00000021288 Trappc8E9PWG2 1437 aa18.89■□□□□ 0.61
Usp43-201ENSMUST00000021288 Asxl1P59598 1514 aa18.89■□□□□ 0.61
Usp43-201ENSMUST00000021288 Ggnbp2Q5SV77 696 aa18.89■□□□□ 0.61
Usp43-201ENSMUST00000021288 Pla2r1Q62028 1487 aa18.88■□□□□ 0.61
Usp43-201ENSMUST00000021288 HnrnpmQ9D0E1 729 aaKnown RBP18.88■□□□□ 0.61
Usp43-201ENSMUST00000021288 PnnO35691 725 aaKnown RBP18.87■□□□□ 0.61
Usp43-201ENSMUST00000021288 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.87■□□□□ 0.61
Usp43-201ENSMUST00000021288 Cfdp1O88271 295 aaKnown RBP18.87■□□□□ 0.61
Usp43-201ENSMUST00000021288 Liat1Q810M6 228 aa18.87■□□□□ 0.61
Usp43-201ENSMUST00000021288 Sv2bQ8BG39 683 aa18.87■□□□□ 0.61
Usp43-201ENSMUST00000021288 Casq1O09165 405 aa18.86■□□□□ 0.61
Usp43-201ENSMUST00000021288 Disp1Q3TDN0 1521 aa18.86■□□□□ 0.61
Usp43-201ENSMUST00000021288 Nol10Q5RJG1 687 aaKnown RBP18.86■□□□□ 0.61
Usp43-201ENSMUST00000021288 Mlh3A0A1Y7VMP7 1443 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms