RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 NeflP08551 543 aa22.09■■□□□ 1.13
Ctcf-201ENSMUST00000005841 Pank3Q8R2W9 370 aa22.08■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Anp32bQ9EST5 272 aaKnown RBP22.08■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Mrc2Q64449 1479 aa22.07■■□□□ 1.12
Ctcf-201ENSMUST00000005841 DaxxO35613 739 aa22.07■■□□□ 1.12
Ctcf-201ENSMUST00000005841 B4galnt3Q6L8S8 986 aa22.06■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Esx1O88933 382 aa22.06■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Sipa1l1Q8C0T5 1782 aa22.06■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Ppm1gQ61074 542 aa22.05■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Edc4Q3UJB9 1406 aaKnown RBP22.05■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Abcc1O35379 1528 aa22.05■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Zscan10Q3URR7 782 aa22.05■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Antxr1Q9CZ52 562 aa22.04■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Myom2Q14BI5 1463 aa22.04■■□□□ 1.12
Ctcf-201ENSMUST00000005841 ShprhQ7TPQ3 1674 aa22.03■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Ppp2r1aQ76MZ3 589 aa22.02■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Inpp5dQ9ES52 1191 aa22.02■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Rab3gap2Q8BMG7 1366 aa22.02■■□□□ 1.12
Ctcf-201ENSMUST00000005841 Map4P27546 1125 aaKnown RBP22.01■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Gtf2a1Q99PM3 378 aa22.01■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Mapk8ip3Q9ESN9 1337 aa22.01■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Iqsec2Q5DU25 1478 aa22■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Chmp5Q9D7S9 219 aa22■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Rwdd1Q9CQK7 243 aa22■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Dcaf11Q91VU6 549 aa21.99■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Cd109Q8R422 1442 aa21.98■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Cdk5rap2Q8K389 1822 aa21.98■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Abcc3B2RX12 1523 aa21.98■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Rusc2Q80U22 1514 aa21.97■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Abca9Q8K449 1623 aa21.96■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Tmem131lQ3U3D7 1597 aa21.96■■□□□ 1.11
Ctcf-201ENSMUST00000005841 Cep152A2AUM9 1736 aaKnown RBP21.95■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Abca8aQ8K442 1620 aa21.95■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Trpm1Q2TV84 1622 aa21.95■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Eif2s2Q99L45 331 aaKnown RBP21.95■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Kiaa1210E9Q0C6 1637 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 CrbnQ8C7D2 445 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Ak7Q9D2H2 614 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Fancd2Q80V62 1450 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Rad21Q61550 635 aaKnown RBP21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Kiaa1107Q80TK0 1369 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 DnmbpQ6TXD4 1580 aa21.94■■□□□ 1.1
Ctcf-201ENSMUST00000005841 4933416C03RikQ3V063 378 aa21.93■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Ipo8Q7TMY7 1010 aa21.92■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Zfyve16Q80U44 1528 aa21.91■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Prdm2A2A7B5 1709 aaKnown RBP21.91■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Gprasp1Q5U4C1 1347 aa21.91■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Myo5cE9Q1F5 1742 aa21.91■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Adgrl1Q80TR1 1466 aa21.91■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Dbr1Q923B1 550 aa21.9■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Rlbp1Q9Z275 317 aa21.9■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Ino80Q6ZPV2 1559 aa21.9■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Ccdc183A2AJB1 534 aa21.9■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Kif1bQ60575 1816 aaKnown RBP21.9■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Tmf1B9EKI3 1091 aa21.89■■□□□ 1.1
Ctcf-201ENSMUST00000005841 Tspyl2Q7TQI8 677 aa21.89■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Xrn1P97789 1719 aaKnown RBP21.89■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Talpid3E9PV87 1520 aa21.88■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Kif20aP97329 887 aa21.88■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Hecw2Q6I6G8 1578 aa21.87■■□□□ 1.09
Ctcf-201ENSMUST00000005841 KdrP35918 1367 aa21.87■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Fam135bQ9DAI6 1403 aa21.86■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Phf14Q9D4H9 881 aa21.85■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Ift172Q6VH22 1749 aa21.85■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Znf608Q56A10 1511 aa21.84■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Fndc1E9Q043 1732 aa21.84■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Cfap65Q3V0B4 1847 aa21.84■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Ccdc30Q8BVF4 654 aa21.84■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Usp54Q8BL06 1588 aaKnown RBP21.83■■□□□ 1.09
Ctcf-201ENSMUST00000005841 Uspl1Q3ULM6 1089 aa21.83■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Rrp9Q91WM3 475 aaKnown RBP21.83■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Abcc6Q9R1S7 1498 aa21.83■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Abca8bQ8K440 1620 aa21.82■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Duxf3A0A0N4SV92 674 aa21.82■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Sptbn5F6UCX4 1208 aa21.82■■□□□ 1.08
Ctcf-201ENSMUST00000005841 4933402E13RikQ9D4D2 429 aa21.82■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Ttc37F8VPK0 1563 aa21.82■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Adgrl3Q80TS3 1537 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Ehbp1l1Q99MS7 1716 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Gas2l2Q5SSG4 860 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Kidins220E9Q9B7 1793 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Tbc1d32Q3URV1 1296 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Kif2cQ922S8 721 aa21.81■■□□□ 1.08
Ctcf-201ENSMUST00000005841 ErbinQ80TH2 1402 aa21.8■■□□□ 1.08
Ctcf-201ENSMUST00000005841 NhsB1AV60 1647 aa21.79■■□□□ 1.08
Ctcf-201ENSMUST00000005841 AampJ3QN89 436 aa21.79■■□□□ 1.08
Ctcf-201ENSMUST00000005841 AU015836B2RUM3 263 aa21.78■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Fam184bQ0KK56 942 aa21.77■■□□□ 1.08
Ctcf-201ENSMUST00000005841 Iqgap3F8VQ29 1632 aa21.76■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Ddit3P35639 168 aa21.75■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Ifit1bl1D3Z6F0 470 aa21.74■■□□□ 1.07
Ctcf-201ENSMUST00000005841 AI481877A2ALV5 1481 aa21.74■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Rims1Q99NE5 1463 aa21.74■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Slc4a1apE9PX68 744 aa21.72■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Htatsf1Q8BGC0 757 aa21.72■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Arhgap5P97393 1501 aa21.71■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Hfm1D3Z4R1 1434 aa21.71■■□□□ 1.07
Ctcf-201ENSMUST00000005841 Ppp2r3aB2RXC8 1150 aa21.7■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Speer4f1Q9D5Q6 258 aa21.7■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Clstn2Q9ER65 966 aa21.7■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms