RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Arid4bA2CG63 1314 aaKnown RBP15.9■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Ttll13A4Q9F6 804 aa15.9■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Zfp444Q3TDV8 331 aaKnown RBP15.9■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Trpm2Q91YD4 1506 aa15.9■□□□□ 0.14
Ufd1-201ENSMUST00000005394 ChgaP26339 463 aaKnown RBP15.89■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Zscan21Q07231 555 aa15.89■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Mre11Q61216 706 aa15.89■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Card11Q8CIS0 1159 aa15.89■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Hecw1Q8K4P8 1604 aa15.87■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Iqgap1Q9JKF1 1657 aaKnown RBP15.86■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Asxl1P59598 1514 aa15.86■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Ercc6l2Q9JIM3 1537 aa15.86■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Polr3aB2RXC6 1390 aa15.86■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Afap1Q80YS6 731 aa15.86■□□□□ 0.13
Ufd1-201ENSMUST00000005394 DaxxO35613 739 aa15.85■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Dhx9O70133 1380 aaKnown RBP15.85■□□□□ 0.13
Ufd1-201ENSMUST00000005394 4933416C03RikQ3V063 378 aa15.84■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Kdm2bQ6P1G2 1309 aa15.84■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Supt6hQ62383 1726 aaKnown RBP15.84■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Rrp7aQ9D1C9 280 aaKnown RBP15.84■□□□□ 0.13
Ufd1-201ENSMUST00000005394 Rpgrip1lQ8CG73 1264 aa15.83■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Nos1Q9Z0J4 1429 aa15.83■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Cdk13Q69ZA1 1511 aaKnown RBP15.83■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Cdc42bpgQ80UW5 1551 aa15.82■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Adgrb2Q8CGM1 1561 aa15.82■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Tmc1Q8R4P5 757 aa15.81■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Ppm1gQ61074 542 aa15.8■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Ahdc1Q6PAL7 1594 aaKnown RBP15.8■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Rock1P70335 1354 aa15.8■□□□□ 0.12
Ufd1-201ENSMUST00000005394 CanxP35564 591 aaKnown RBP15.8■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Rgl3Q3UYI5 709 aa15.8■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Dnai1Q8C0M8 701 aa15.79■□□□□ 0.12
Ufd1-201ENSMUST00000005394 EspnQ9ET47 871 aa15.79■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Gli2Q0VGT2 1544 aa15.79■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Ttll5Q8CHB8 1328 aa15.78■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Prdm16A2A935 1275 aa15.78■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Trpm1Q2TV84 1622 aa15.78■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Sart3Q9JLI8 962 aaKnown RBP15.77■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Talpid3E9PV87 1520 aa15.77■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Tex14Q7M6U3 1450 aa15.77■□□□□ 0.12
Ufd1-201ENSMUST00000005394 Abca6Q8K441 1624 aa15.77■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Plch2A2AP18 1501 aa15.77■□□□□ 0.11
Ufd1-201ENSMUST00000005394 NudcO35685 332 aaKnown RBP15.76■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Pdcl3Q8BVF2 240 aa15.76■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Myom2Q14BI5 1463 aa15.76■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Kif3bQ61771 747 aa15.76■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Znf518aB2RRF6 1478 aaKnown RBP15.75■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Kcnn1Q9EQR3 537 aa15.75■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Xrn1P97789 1719 aaKnown RBP15.74■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Fmn2Q9JL04 1578 aa15.74■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Mast1Q9R1L5 1570 aa15.74■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Dot1lQ6XZL8 1540 aa15.73■□□□□ 0.11
Ufd1-201ENSMUST00000005394 4930407I10RikD3Z5T8 1512 aa15.72■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Mapk8ip3Q9ESN9 1337 aa15.71■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Tarbp1E9Q368 1579 aa15.71■□□□□ 0.11
Ufd1-201ENSMUST00000005394 Smc5Q8CG46 1101 aaKnown RBP15.71■□□□□ 0.1
Ufd1-201ENSMUST00000005394 PtprgQ05909 1442 aa15.71■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Nup155Q99P88 1391 aaKnown RBP15.7■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Zbtb7cQ8VCZ7 619 aa15.7■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Trak1Q6PD31 939 aa15.69■□□□□ 0.1
Ufd1-201ENSMUST00000005394 CltcQ68FD5 1675 aaKnown RBP15.69■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Q7TT23 1179 aa15.69■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Gtf2a1Q99PM3 378 aa15.69■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Spag9Q58A65 1321 aaKnown RBP15.69■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Plekhh1Q80TI1 1356 aa15.68■□□□□ 0.1
Ufd1-201ENSMUST00000005394 CatipB9EKE5 520 aa15.68■□□□□ 0.1
Ufd1-201ENSMUST00000005394 4933402E13RikQ9D4D2 429 aa15.68■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Atf7ipQ7TT18 1306 aa15.68■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Rwdd1Q9CQK7 243 aa15.67■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Dip2bQ3UH60 1574 aa15.67■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Rsph4aQ8BYM7 716 aa15.66■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Chmp5Q9D7S9 219 aa15.66■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Kif16bB1AVY7 1312 aa15.66■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Sbno1Q689Z5 1390 aa15.66■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Adgrl2Q8JZZ7 1487 aa15.65■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Ppip5k1A2ARP1 1436 aa15.65■□□□□ 0.1
Ufd1-201ENSMUST00000005394 Uggt2E9Q4X2 1504 aa15.64■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Topbp1Q6ZQF0 1515 aa15.64■□□□□ 0.09
Ufd1-201ENSMUST00000005394 RictorQ6QI06 1708 aa15.64■□□□□ 0.09
Ufd1-201ENSMUST00000005394 AU015836B2RUM3 263 aa15.64■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Grwd1Q810D6 446 aaKnown RBP15.64■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Ppp1r9bQ6R891 817 aaKnown RBP15.63■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Abca17E9PX95 1733 aa15.63■□□□□ 0.09
Ufd1-201ENSMUST00000005394 PrxO55103 1391 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 AampJ3QN89 436 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 B4galnt3Q6L8S8 986 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Topaz1E5FYH1 1653 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Knl1Q66JQ7 1612 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Ssh2Q5SW75 1423 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Mroh3A0A1D5RM54 893 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Ipo8Q7TMY7 1010 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Htatsf1Q8BGC0 757 aa15.62■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Usp54Q8BL06 1588 aaKnown RBP15.61■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Scn4aQ9ER60 1841 aa15.6■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Dip2aQ8BWT5 1523 aa15.59■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Kif20aP97329 887 aa15.59■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Rad21Q61550 635 aaKnown RBP15.59■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Zscan10Q3URR7 782 aa15.58■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Pank3Q8R2W9 370 aa15.58■□□□□ 0.09
Ufd1-201ENSMUST00000005394 Rrp9Q91WM3 475 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms