RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 TVP23P38962 199 aa-1.11□□□□□ -2.59
snR48snR48 DCV1P43595 202 aa-1.11□□□□□ -2.59
snR48snR48 PNC1P53184 216 aaKnown RBP-1.11□□□□□ -2.59
snR48snR48 SWP1Q02795 286 aa-1.11□□□□□ -2.59
snR48snR48 SPO19Q03029 223 aa-1.11□□□□□ -2.59
snR48snR48 BNA7Q04066 261 aa-1.11□□□□□ -2.59
snR48snR48 FIT1Q04433 528 aa-1.11□□□□□ -2.59
snR48snR48 FYV12Q08559 129 aa-1.11□□□□□ -2.59
snR48snR48 TAO3P40468 2376 aa-1.12□□□□□ -2.59
snR48snR48 ERD2P18414 219 aa-1.12□□□□□ -2.59
snR48snR48 CDC10P25342 322 aaKnown RBP-1.12□□□□□ -2.59
snR48snR48 RPB7P34087 171 aa-1.12□□□□□ -2.59
snR48snR48 YBR242WP38331 238 aa-1.12□□□□□ -2.59
snR48snR48 SMB1P40018 196 aaKnown RBP-1.12□□□□□ -2.59
snR48snR48 FMP33P46998 180 aa-1.12□□□□□ -2.59
snR48snR48 SPO13P23624 291 aa-1.13□□□□□ -2.59
snR48snR48 KRR1P25586 316 aaPredicted RBP-1.13□□□□□ -2.59
snR48snR48 ECM4P36156 370 aa-1.13□□□□□ -2.59
snR48snR48 YBR285WP38354 144 aa-1.13□□□□□ -2.59
snR48snR48 YHR127WP38833 243 aaKnown RBP-1.13□□□□□ -2.59
snR48snR48 HHY1P39982 102 aa-1.13□□□□□ -2.59
snR48snR48 IRC22P40006 225 aa-1.13□□□□□ -2.59
snR48snR48 RPS29BP41058 56 aaKnown RBP-1.13□□□□□ -2.59
snR48snR48 YKR005CQ02203 525 aa-1.13□□□□□ -2.59
snR48snR48 YDR209CQ03480 137 aa-1.13□□□□□ -2.59
snR48snR48 TMA23Q03525 211 aa-1.13□□□□□ -2.59
snR48snR48 LPP1Q04396 274 aa-1.13□□□□□ -2.59
snR48snR48 YLR157W-EP0CF00 54 aa-1.14□□□□□ -2.59
snR48snR48 MEK1P24719 497 aaPredicted RBP-1.14□□□□□ -2.59
snR48snR48 YCR001WP25347 104 aa-1.14□□□□□ -2.59
snR48snR48 RPT5P33297 434 aaKnown RBP-1.14□□□□□ -2.59
snR48snR48 BLI1P35727 113 aa-1.14□□□□□ -2.59
snR48snR48 POP4P38336 279 aa-1.14□□□□□ -2.59
snR48snR48 PRS2P38620 318 aaKnown RBP-1.14□□□□□ -2.59
snR48snR48 YER034WP40022 185 aaKnown RBP-1.14□□□□□ -2.59
snR48snR48 YMR144WP40214 342 aaKnown RBP-1.14□□□□□ -2.59
snR48snR48 GCD14P46959 383 aaPredicted RBP-1.14□□□□□ -2.59
snR48snR48 ERV41Q04651 352 aa-1.14□□□□□ -2.59
snR48snR48 GMC2Q06201 188 aa-1.14□□□□□ -2.59
snR48snR48 YPR013CQ12145 317 aa-1.14□□□□□ -2.59
snR48snR48 YPL229WQ99395 206 aa-1.14□□□□□ -2.59
snR48snR48 RPL43AP0CX25 92 aaKnown RBP-1.15□□□□□ -2.59
snR48snR48 RPL43BP0CX26 92 aa-1.15□□□□□ -2.59
snR48snR48 MRP1P10662 321 aaKnown RBP-1.15□□□□□ -2.59
snR48snR48 HOM6P31116 359 aaKnown RBP-1.15□□□□□ -2.59
snR48snR48 DOG2P38773 246 aa-1.15□□□□□ -2.59
snR48snR48 USE1P53146 245 aa-1.15□□□□□ -2.59
snR48snR48 YDR274CP87283 123 aa-1.15□□□□□ -2.59
snR48snR48 SEI1Q06058 285 aa-1.15□□□□□ -2.59
snR48snR48 FIT2Q08906 153 aa-1.15□□□□□ -2.59
snR48snR48 FMP16Q12497 93 aa-1.15□□□□□ -2.59
snR48snR48 SSK22P25390 1331 aaPredicted RBP-1.15□□□□□ -2.59
snR48snR48 YOL013W-AP0C272 63 aaPredicted RBP-1.16□□□□□ -2.6
snR48snR48 YHL018WP38744 120 aaPredicted RBP-1.16□□□□□ -2.6
snR48snR48 YJR015WP47090 510 aa-1.16□□□□□ -2.6
snR48snR48 SEN2P16658 377 aa-1.17□□□□□ -2.6
snR48snR48 PTC1P35182 281 aa-1.17□□□□□ -2.6
snR48snR48 SKG1P36169 355 aa-1.17□□□□□ -2.6
snR48snR48 BFR1P38934 470 aaKnown RBP RIP-Chip data-1.17□□□□□ -2.6not detected
snR48snR48 LOC1P43586 204 aaPredicted RBP-1.17□□□□□ -2.6
snR48snR48 ELP6Q04868 273 aa-1.17□□□□□ -2.6
snR48snR48 SNU23Q12368 194 aaPredicted RBP-1.17□□□□□ -2.6
snR48snR48 SPT7P35177 1332 aa-1.17□□□□□ -2.6
snR48snR48 COX8P04039 78 aa-1.18□□□□□ -2.6
snR48snR48 MGM101P32787 269 aaKnown RBP-1.18□□□□□ -2.6
snR48snR48 OSW5P40219 148 aa-1.18□□□□□ -2.6
snR48snR48 PRO2P54885 456 aaKnown RBP-1.18□□□□□ -2.6
snR48snR48 VPS71Q03433 280 aa-1.18□□□□□ -2.6
snR48snR48 NUP84P52891 726 aa-1.19□□□□□ -2.6
snR48snR48 MGR3Q04472 501 aa-1.19□□□□□ -2.6
snR48snR48 ADH6Q04894 360 aaKnown RBP-1.19□□□□□ -2.6
snR48snR48 YLR126CQ12288 251 aa-1.19□□□□□ -2.6
snR48snR48 YFR032C-BQ8TGU2 87 aa-1.19□□□□□ -2.6
snR48snR48 FAS1P07149 2051 aaKnown RBP-1.19□□□□□ -2.6
snR48snR48 TRX1P22217 103 aaKnown RBP-1.2□□□□□ -2.6
snR48snR48 SLM6P38343 150 aa-1.2□□□□□ -2.6
snR48snR48 DAD4P69851 72 aa-1.2□□□□□ -2.6
snR48snR48 YML108WQ03759 105 aa-1.2□□□□□ -2.6
snR48snR48 PRP11Q07350 266 aaPredicted RBP-1.2□□□□□ -2.6
snR48snR48 ABP140Q08641 628 aaKnown RBP-1.2□□□□□ -2.6
snR48snR48 TDA8Q6B2U8 126 aa-1.2□□□□□ -2.6
snR48snR48 TAR1Q8TGM6 124 aa-1.2□□□□□ -2.6
snR48snR48 RPL27AP0C2H6 136 aaKnown RBP-1.21□□□□□ -2.6
snR48snR48 DID2P69771 204 aa-1.21□□□□□ -2.6
snR48snR48 LAP3Q01532 483 aaKnown RBP RIP-Chip data-1.21□□□□□ -2.6not detected
snR48snR48 UPS1Q05776 175 aa-1.21□□□□□ -2.6
snR48snR48 YLR413WQ06689 675 aa-1.21□□□□□ -2.6
snR48snR48 MCP1Q12106 302 aa-1.21□□□□□ -2.6
snR48snR48 MAK5P38112 773 aaPredicted RBP-1.22□□□□□ -2.6
snR48snR48 YDC1Q02896 317 aa-1.22□□□□□ -2.6
snR48snR48 BTS1Q12051 335 aa-1.22□□□□□ -2.6
snR48snR48 JLP1Q12358 412 aa-1.22□□□□□ -2.6
snR48snR48 LSO2Q3E772 92 aaKnown RBP-1.22□□□□□ -2.6
snR48snR48 SRB4P32569 687 aa-1.23□□□□□ -2.61
snR48snR48 PAN3P36102 679 aaPredicted RBP-1.23□□□□□ -2.61
snR48snR48 YMR141CP40211 102 aa-1.23□□□□□ -2.61
snR48snR48 ALB1P47019 175 aaPredicted RBP-1.23□□□□□ -2.61
snR48snR48 PET191Q02772 108 aa-1.23□□□□□ -2.61
snR48snR48 DGA1Q08650 418 aa-1.23□□□□□ -2.61
snR48snR48 MDY2Q12285 212 aa-1.23□□□□□ -2.61
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms