RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 YJL213WP40896 331 aa1.98□□□□□ -2.09
snR43snR43 DIM1P41819 318 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 WWM1P43582 211 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 YJR056CP47115 236 aa1.98□□□□□ -2.09
snR43snR43 ECM27P47144 725 aa1.98□□□□□ -2.09
snR43snR43 EFM3P47163 339 aa1.98□□□□□ -2.09
snR43snR43 YIP1P53039 248 aa1.98□□□□□ -2.09
snR43snR43 POP6P53218 158 aa1.98□□□□□ -2.09
snR43snR43 CAB4P53332 305 aa1.98□□□□□ -2.09
snR43snR43 ACT1P60010 375 aaKnown RBP1.98□□□□□ -2.09
snR43snR43 MRPL13Q02204 264 aa1.98□□□□□ -2.09
snR43snR43 SMP3Q04174 516 aa1.98□□□□□ -2.09
snR43snR43 NEJ1Q06148 342 aa1.98□□□□□ -2.09
snR43snR43 YLR173WQ06247 608 aa1.98□□□□□ -2.09
snR43snR43 YOR186WQ08560 144 aa1.98□□□□□ -2.09
snR43snR43 VAM3Q12241 283 aa1.98□□□□□ -2.09
snR43snR43 FRE6Q12473 712 aa1.98□□□□□ -2.09
snR43snR43 COX2P00410 251 aa1.97□□□□□ -2.09
snR43snR43 MRP1P10662 321 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 PWP1P21304 576 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 YCR101CP25607 182 aa1.97□□□□□ -2.09
snR43snR43 ERG2P32352 222 aa1.97□□□□□ -2.09
snR43snR43 RCN1P36054 211 aa1.97□□□□□ -2.09
snR43snR43 YKL075CP36083 450 aa1.97□□□□□ -2.09
snR43snR43 SHE1P38200 338 aa1.97□□□□□ -2.09
snR43snR43 AIM10P39965 576 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 THO1P40040 218 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 PRM5P40476 318 aa1.97□□□□□ -2.09
snR43snR43 SYG1P40528 902 aa1.97□□□□□ -2.09
snR43snR43 SWP82P43554 623 aa1.97□□□□□ -2.09
snR43snR43 GWT1P47026 490 aa1.97□□□□□ -2.09
snR43snR43 LYS20P48570 428 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 YGL262WP53054 175 aa1.97□□□□□ -2.09
snR43snR43 SNZ1Q03148 297 aa1.97□□□□□ -2.09
snR43snR43 YMR099CQ03161 297 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 TDA1Q03533 586 aa1.97□□□□□ -2.09
snR43snR43 YMD8Q03697 442 aa1.97□□□□□ -2.09
snR43snR43 GRH1Q04410 372 aaKnown RBP1.97□□□□□ -2.09
snR43snR43 PEX30Q06169 523 aa1.97□□□□□ -2.09
snR43snR43 NOC4Q06512 552 aaPredicted RBP1.97□□□□□ -2.09
snR43snR43 HEM25Q07534 307 aa1.97□□□□□ -2.09
snR43snR43 ORT1Q12375 292 aa1.97□□□□□ -2.09
snR43snR43 YBR255C-AQ3E776 120 aa1.97□□□□□ -2.09
snR43snR43 ATG40Q99325 256 aa1.97□□□□□ -2.09
snR43snR43 REP2P03872 296 aa1.96□□□□□ -2.1
snR43snR43 RPL42AP0CX27 106 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 RPL42BP0CX28 106 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 STF2P16965 84 aa1.96□□□□□ -2.1
snR43snR43 GRX2P17695 143 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 ERV1P27882 189 aa1.96□□□□□ -2.1
snR43snR43 ARO7P32178 256 aa1.96□□□□□ -2.1
snR43snR43 RAD23P32628 398 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 SNC2P33328 115 aa1.96□□□□□ -2.1
snR43snR43 NTC20P38302 140 aaPredicted RBP1.96□□□□□ -2.1
snR43snR43 YBR285WP38354 144 aa1.96□□□□□ -2.1
snR43snR43 PHM8P40025 321 aa1.96□□□□□ -2.1
snR43snR43 ERG25P53045 309 aa1.96□□□□□ -2.1
snR43snR43 SCW4P53334 386 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 PAU12P53343 120 aa1.96□□□□□ -2.1
snR43snR43 YDR274CP87283 123 aa1.96□□□□□ -2.1
snR43snR43 RBS1Q05672 457 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 MSC3Q05812 728 aa1.96□□□□□ -2.1
snR43snR43 YLR345WQ06137 509 aa1.96□□□□□ -2.1
snR43snR43 MDM36Q06820 579 aa1.96□□□□□ -2.1
snR43snR43 DTD1Q07648 150 aaKnown RBP1.96□□□□□ -2.1
snR43snR43 DGK1Q12382 290 aa1.96□□□□□ -2.1
snR43snR43 TFC7Q12415 435 aa1.96□□□□□ -2.1
snR43snR43 MRS3P10566 314 aa1.95□□□□□ -2.1
snR43snR43 YCP4P25349 247 aaKnown RBP1.95□□□□□ -2.1
snR43snR43 ARO4P32449 370 aaKnown RBP1.95□□□□□ -2.1
snR43snR43 ECM4P36156 370 aa1.95□□□□□ -2.1
snR43snR43 SWD3P38123 315 aa1.95□□□□□ -2.1
snR43snR43 PAU24P38155 120 aa1.95□□□□□ -2.1
snR43snR43 UMP1P38293 148 aa1.95□□□□□ -2.1
snR43snR43 MPC2P38857 129 aa1.95□□□□□ -2.1
snR43snR43 MDM31P38880 579 aa1.95□□□□□ -2.1
snR43snR43 IES5P40060 125 aa1.95□□□□□ -2.1
snR43snR43 YNL194CP40169 301 aa1.95□□□□□ -2.1
snR43snR43 RPL9BP51401 191 aaKnown RBP1.95□□□□□ -2.1
snR43snR43 TOS8P53147 276 aa1.95□□□□□ -2.1
snR43snR43 SRL4Q03085 281 aa1.95□□□□□ -2.1
snR43snR43 FIN1Q03898 291 aa1.95□□□□□ -2.1
snR43snR43 RRP17Q04031 235 aaPredicted RBP1.95□□□□□ -2.1
snR43snR43 YDR415CQ04033 374 aaPredicted RBP1.95□□□□□ -2.1
snR43snR43 FIT1Q04433 528 aa1.95□□□□□ -2.1
snR43snR43 MCH1Q07376 486 aa1.95□□□□□ -2.1
snR43snR43 YPD1Q07688 167 aa1.95□□□□□ -2.1
snR43snR43 LOT6Q07923 191 aa1.95□□□□□ -2.1
snR43snR43 SWT1Q12104 458 aa1.95□□□□□ -2.1
snR43snR43 YLR112WQ12130 139 aa1.95□□□□□ -2.1
snR43snR43 JID1Q12350 301 aa1.95□□□□□ -2.1
snR43snR43 QCR7P00128 127 aa1.94□□□□□ -2.1
snR43snR43 ATR1P13090 542 aa1.94□□□□□ -2.1
snR43snR43 IDP1P21954 428 aaKnown RBP1.94□□□□□ -2.1
snR43snR43 PRE7P23724 241 aaKnown RBP1.94□□□□□ -2.1
snR43snR43 ROX3P25046 220 aa1.94□□□□□ -2.1
snR43snR43 PET18P25362 215 aa1.94□□□□□ -2.1
snR43snR43 FUN26P31381 517 aa1.94□□□□□ -2.1
snR43snR43 HYM1P32464 399 aa1.94□□□□□ -2.1
snR43snR43 PDB1P32473 366 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms