RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W RMR1P53060 241 aa3.37□□□□□ -1.87
PRE2YPR103W YKL183C-AQ3E765 70 aa3.37□□□□□ -1.87
PRE2YPR103W SEY1Q99287 776 aa3.37□□□□□ -1.87
PRE2YPR103W SIR4P11978 1358 aa3.37□□□□□ -1.87
PRE2YPR103W SNF6P18888 332 aa3.36□□□□□ -1.87
PRE2YPR103W PBN1P25580 416 aa3.36□□□□□ -1.87
PRE2YPR103W SRY1P36007 326 aa3.36□□□□□ -1.87
PRE2YPR103W RPF1P38805 295 aaKnown RBP3.36□□□□□ -1.87
PRE2YPR103W SNX4P47057 423 aa3.36□□□□□ -1.87
PRE2YPR103W MIC26P50087 233 aa3.36□□□□□ -1.87
PRE2YPR103W ALG13P53178 202 aa3.36□□□□□ -1.87
PRE2YPR103W CGI121Q03705 181 aaKnown RBP3.36□□□□□ -1.87
PRE2YPR103W CDC123Q05791 360 aa3.36□□□□□ -1.87
PRE2YPR103W RAD9P14737 1309 aa3.36□□□□□ -1.87
PRE2YPR103W URB1P34241 1764 aaKnown RBP3.35□□□□□ -1.87
PRE2YPR103W TCD1P38756 429 aa3.35□□□□□ -1.87
PRE2YPR103W PRE6P40303 254 aaKnown RBP3.35□□□□□ -1.87
PRE2YPR103W NSA1P53136 463 aaPredicted RBP3.35□□□□□ -1.87
PRE2YPR103W NHP6BP11633 99 aaKnown RBP3.34□□□□□ -1.87
PRE2YPR103W DOA4P32571 926 aa3.34□□□□□ -1.87
PRE2YPR103W COX15P40086 486 aa3.34□□□□□ -1.87
PRE2YPR103W HAM1P47119 197 aaKnown RBP3.34□□□□□ -1.87
PRE2YPR103W ERV29P53337 310 aa3.34□□□□□ -1.87
PRE2YPR103W YMR279CQ03263 540 aa3.34□□□□□ -1.87
PRE2YPR103W AKR2Q12013 749 aa3.34□□□□□ -1.87
PRE2YPR103W GIS3Q12418 502 aa3.34□□□□□ -1.87
PRE2YPR103W YOR062CP36025 268 aa3.33□□□□□ -1.88
PRE2YPR103W ERG28P40030 148 aa3.33□□□□□ -1.88
PRE2YPR103W FIS1P40515 155 aa3.33□□□□□ -1.88
PRE2YPR103W DAN1P47178 298 aa3.33□□□□□ -1.88
PRE2YPR103W ECM33P38248 429 aaKnown RBP3.32□□□□□ -1.88
PRE2YPR103W MNN5P46982 586 aa3.32□□□□□ -1.88
PRE2YPR103W ILM1P47155 203 aa3.32□□□□□ -1.88
PRE2YPR103W ATG39Q06159 398 aa3.32□□□□□ -1.88
PRE2YPR103W EMC6Q12431 108 aa3.32□□□□□ -1.88
PRE2YPR103W FKS3Q04952 1785 aa3.31□□□□□ -1.88
PRE2YPR103W RSF2P46974 1380 aa3.31□□□□□ -1.88
PRE2YPR103W CDC33P07260 213 aaKnown RBP3.31□□□□□ -1.88
PRE2YPR103W YBR121C-AP0C5L4 52 aa3.31□□□□□ -1.88
PRE2YPR103W URA6P15700 204 aa3.31□□□□□ -1.88
PRE2YPR103W CBT1P36038 271 aaPredicted RBP3.31□□□□□ -1.88
PRE2YPR103W GRE3P38715 327 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
PRE2YPR103W YJR056CP47115 236 aa3.31□□□□□ -1.88
PRE2YPR103W GRX3Q03835 250 aa3.31□□□□□ -1.88
PRE2YPR103W YOR020W-AQ3E824 90 aa3.31□□□□□ -1.88
PRE2YPR103W TY4B-HP0C2J7 1802 aa3.3□□□□□ -1.88
PRE2YPR103W TY4B-JP47024 1803 aa3.3□□□□□ -1.88
PRE2YPR103W FCY2P17064 533 aa3.3□□□□□ -1.88
PRE2YPR103W COQ1P18900 473 aa3.3□□□□□ -1.88
PRE2YPR103W YNL194CP40169 301 aa3.3□□□□□ -1.88
PRE2YPR103W YGR026WP53217 278 aa3.3□□□□□ -1.88
PRE2YPR103W FYV6P53913 173 aa3.3□□□□□ -1.88
PRE2YPR103W YML096WQ04489 525 aa3.3□□□□□ -1.88
PRE2YPR103W DCN1Q12395 269 aa3.3□□□□□ -1.88
PRE2YPR103W FKS1P38631 1876 aaKnown RBP3.29□□□□□ -1.88
PRE2YPR103W YAR068WP39564 161 aa3.29□□□□□ -1.88
PRE2YPR103W FCY21P40039 528 aa3.29□□□□□ -1.88
PRE2YPR103W RAD17P48581 401 aa3.29□□□□□ -1.88
PRE2YPR103W MGA1P53050 456 aa3.29□□□□□ -1.88
PRE2YPR103W PGA2P53903 129 aa3.29□□□□□ -1.88
PRE2YPR103W MHT1Q12525 324 aa3.29□□□□□ -1.88
PRE2YPR103W SNF2P22082 1703 aa3.28□□□□□ -1.88
PRE2YPR103W YDR157WA0A023PZE8 133 aa3.28□□□□□ -1.88
PRE2YPR103W CDC28P00546 298 aaKnown RBP3.28□□□□□ -1.88
PRE2YPR103W ADH3P07246 375 aaKnown RBP3.28□□□□□ -1.88
PRE2YPR103W GRX2P17695 143 aaKnown RBP3.28□□□□□ -1.88
PRE2YPR103W SSO1P32867 290 aa3.28□□□□□ -1.88
PRE2YPR103W PRP18P33411 251 aaPredicted RBP3.28□□□□□ -1.88
PRE2YPR103W YBR063CP38083 404 aa3.28□□□□□ -1.88
PRE2YPR103W YRB1P41920 201 aaKnown RBP3.28□□□□□ -1.88
PRE2YPR103W YJL027CP47063 138 aaPredicted RBP3.28□□□□□ -1.88
PRE2YPR103W NUP57P48837 541 aa3.28□□□□□ -1.88
PRE2YPR103W BRR6P53062 197 aa3.28□□□□□ -1.88
PRE2YPR103W DBF2P22204 572 aa3.27□□□□□ -1.89
PRE2YPR103W PRX1P34227 261 aaKnown RBP3.27□□□□□ -1.89
PRE2YPR103W CWC23P52868 283 aaPredicted RBP3.27□□□□□ -1.89
PRE2YPR103W HEM25Q07534 307 aa3.27□□□□□ -1.89
PRE2YPR103W YOR283WQ12040 230 aaKnown RBP3.27□□□□□ -1.89
PRE2YPR103W ADE6P38972 1358 aaKnown RBP3.26□□□□□ -1.89
PRE2YPR103W RPL28P02406 149 aaKnown RBP3.26□□□□□ -1.89
PRE2YPR103W VMA11P32842 164 aa3.26□□□□□ -1.89
PRE2YPR103W DOG1P38774 246 aa3.26□□□□□ -1.89
PRE2YPR103W IRC22P40006 225 aa3.26□□□□□ -1.89
PRE2YPR103W EAF6P47128 113 aa3.26□□□□□ -1.89
PRE2YPR103W ABF2Q02486 183 aa3.26□□□□□ -1.89
PRE2YPR103W ARR2Q06597 130 aa3.26□□□□□ -1.89
PRE2YPR103W NCB2Q92317 146 aa3.26□□□□□ -1.89
PRE2YPR103W YRF1-3P0CX14 1859 aa3.25□□□□□ -1.89
PRE2YPR103W YRF1-7P0CX15 1859 aa3.25□□□□□ -1.89
PRE2YPR103W YRF1-6P53819 1859 aa3.25□□□□□ -1.89
PRE2YPR103W STE18P18852 110 aa3.25□□□□□ -1.89
PRE2YPR103W OAC1P32332 324 aa3.25□□□□□ -1.89
PRE2YPR103W ADO1P47143 340 aaKnown RBP3.25□□□□□ -1.89
PRE2YPR103W DID2P69771 204 aa3.25□□□□□ -1.89
PRE2YPR103W SSQ1Q05931 657 aaPredicted RBP3.25□□□□□ -1.89
PRE2YPR103W RPL9AP05738 191 aaKnown RBP3.24□□□□□ -1.89
PRE2YPR103W CDC36P06100 191 aaPredicted RBP3.24□□□□□ -1.89
PRE2YPR103W PUT1P09368 476 aa3.24□□□□□ -1.89
PRE2YPR103W NTG1P31378 399 aa3.24□□□□□ -1.89
PRE2YPR103W YHR180WP38868 163 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms