RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A YCR087C-AP37263 153 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A UMP1P38293 148 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A MIC12P38341 106 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A RMD6P39975 231 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A HMF1P40037 129 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A VTC1P40046 129 aaRIP-Chip data1.27□□□□□ -2.21not detected
YOR343W-AYOR343W-A PGD1P40356 397 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A YRB2P40517 327 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A TMA22P47089 198 aaPredicted RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A ADO1P47143 340 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A RAD17P48581 401 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A LSM7P53905 115 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A LPP1Q04396 274 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A DYN3Q04949 312 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A ARR2Q06597 130 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A NIP7Q08962 181 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A YHR032W-AP0C5N6 59 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A KSS1P14681 368 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A TFC1P32367 649 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A ERV15P38312 142 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A SHG1P38337 142 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A AST2P39945 430 aaKnown RBP1.26□□□□□ -2.21
YOR343W-AYOR343W-A IRC22P40006 225 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A PEP8P40335 379 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A CWC23P52868 283 aaPredicted RBP1.26□□□□□ -2.21
YOR343W-AYOR343W-A AIF1P52923 378 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A TOS8P53147 276 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A GIM3P53900 129 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A COG5P53951 403 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A SWP1Q02795 286 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A YLR179CQ06252 201 aaKnown RBP1.26□□□□□ -2.21
YOR343W-AYOR343W-A GGA1Q06336 557 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A SWI1P09547 1314 aa1.26□□□□□ -2.21
YOR343W-AYOR343W-A CDC28P00546 298 aaKnown RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A HTB1P02293 131 aaKnown RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A HTB2P02294 131 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A CDC7P06243 507 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A SNF4P12904 322 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A YPK2P18961 677 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A CKS1P20486 150 aaKnown RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A MDH2P22133 377 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A DBF2P22204 572 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A BET1P22804 142 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A OAC1P32332 324 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A PTM1P32857 523 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A YET1P35723 206 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A CAF4P36130 643 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A MSA2P36157 363 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A PHO88P38264 188 aaPredicted RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A YBR209WP38311 105 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A YBR285WP38354 144 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A DSE2P38844 325 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A RPL33BP41056 107 aaKnown RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A CIS3P47001 227 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A BUD25P85052 153 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A GRX5Q02784 150 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A SNZ1Q03148 297 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A YLR031WQ07978 186 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A GPM2Q12008 311 aa1.25□□□□□ -2.21
YOR343W-AYOR343W-A IKI3Q06706 1349 aaKnown RBP1.25□□□□□ -2.21
YOR343W-AYOR343W-A SCL1P21243 252 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A ASF2P32448 525 aaPredicted RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A TMA19P35691 167 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A SRY1P36007 326 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A CBT1P36038 271 aaPredicted RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A VPS51P36116 164 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A AIM2P39721 246 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A AVT2P39981 480 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A YNL194CP40169 301 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A TIR3P40552 269 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A SKI6P46948 246 aaPredicted RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A DOC1P53068 250 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A HOP2P53187 214 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A YGR050CP53231 118 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A MZM1Q03429 123 aaPredicted RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A YDR249CQ03787 373 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A MRPS8Q03799 155 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A YMR315WQ04869 349 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A YNG1Q08465 219 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A FSF1Q12029 327 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A YRA1Q12159 226 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A RIO1Q12196 484 aaKnown RBP1.24□□□□□ -2.21
YOR343W-AYOR343W-A ATO3Q12359 275 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A ODC2Q99297 307 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A SAC3P46674 1301 aa1.24□□□□□ -2.21
YOR343W-AYOR343W-A CPA1P07258 411 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A YPR170W-BP0C5R9 85 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A RPS24AP0CX31 135 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A RPS24BP0CX32 135 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A RPB3P16370 318 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A CNB1P25296 175 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A YCR090CP25654 182 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A RFA3P26755 122 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A TAF14P35189 244 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A CTR2P38865 189 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A BMT5P40493 336 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A GVP36P40531 326 aaKnown RBP1.23□□□□□ -2.21
YOR343W-AYOR343W-A PRM10P42946 383 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A FMP32P43557 207 aa1.23□□□□□ -2.21
YOR343W-AYOR343W-A MMS2P53152 137 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms