RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W PTM1P32857 523 aa1.66□□□□□ -2.14
RRP6YOR001W UTH1P36135 365 aa1.66□□□□□ -2.14
RRP6YOR001W YER076CP40049 302 aa1.66□□□□□ -2.14
RRP6YOR001W RRP17Q04031 235 aaPredicted RBP1.66□□□□□ -2.14
RRP6YOR001W HPT1Q04178 221 aaKnown RBP1.66□□□□□ -2.14
RRP6YOR001W RIO1Q12196 484 aaKnown RBP1.66□□□□□ -2.14
RRP6YOR001W GEP5Q12393 293 aa1.66□□□□□ -2.14
RRP6YOR001W MRPS28P21771 286 aa1.66□□□□□ -2.14
RRP6YOR001W YBR063CP38083 404 aa1.66□□□□□ -2.14
RRP6YOR001W DER1P38307 211 aa1.66□□□□□ -2.14
RRP6YOR001W POP4P38336 279 aa1.66□□□□□ -2.14
RRP6YOR001W MED6P38782 295 aa1.66□□□□□ -2.14
RRP6YOR001W EDC3P39998 551 aaKnown RBP1.66□□□□□ -2.14
RRP6YOR001W LSM1P47017 172 aaKnown RBP1.66□□□□□ -2.14
RRP6YOR001W YDC1Q02896 317 aa1.66□□□□□ -2.14
RRP6YOR001W YMD8Q03697 442 aa1.66□□□□□ -2.14
RRP6YOR001W YDR249CQ03787 373 aa1.66□□□□□ -2.14
RRP6YOR001W RDI1Q12434 202 aa1.66□□□□□ -2.14
RRP6YOR001W YHR214C-EQ8TGK0 99 aa1.66□□□□□ -2.14
RRP6YOR001W REP2P03872 296 aa1.65□□□□□ -2.15
RRP6YOR001W SIR2P06700 562 aa1.65□□□□□ -2.15
RRP6YOR001W PET9P18239 318 aaKnown RBP1.65□□□□□ -2.15
RRP6YOR001W LDB16P25587 256 aa1.65□□□□□ -2.15
RRP6YOR001W AHC2P25649 128 aa1.65□□□□□ -2.15
RRP6YOR001W YCR090CP25654 182 aaKnown RBP1.65□□□□□ -2.15
RRP6YOR001W YOX1P34161 385 aa1.65□□□□□ -2.15
RRP6YOR001W RCN1P36054 211 aa1.65□□□□□ -2.15
RRP6YOR001W MRPS9P38120 278 aa1.65□□□□□ -2.15
RRP6YOR001W CTR2P38865 189 aa1.65□□□□□ -2.15
RRP6YOR001W RMD6P39975 231 aa1.65□□□□□ -2.15
RRP6YOR001W FIS1P40515 155 aa1.65□□□□□ -2.15
RRP6YOR001W YFL012WP43580 148 aa1.65□□□□□ -2.15
RRP6YOR001W SKI6P46948 246 aaPredicted RBP1.65□□□□□ -2.15
RRP6YOR001W ARP3P47117 449 aaKnown RBP1.65□□□□□ -2.15
RRP6YOR001W APJ1P53940 528 aa1.65□□□□□ -2.15
RRP6YOR001W SWP1Q02795 286 aa1.65□□□□□ -2.15
RRP6YOR001W MRX8Q05473 314 aa1.65□□□□□ -2.15
RRP6YOR001W YOL160WQ08321 113 aa1.65□□□□□ -2.15
RRP6YOR001W PSF1Q12488 208 aa1.65□□□□□ -2.15
RRP6YOR001W TDA8Q6B2U8 126 aa1.65□□□□□ -2.15
RRP6YOR001W MBF1O14467 151 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W SOD1P00445 154 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W HIS3P06633 220 aa1.64□□□□□ -2.15
RRP6YOR001W TRX3P25372 127 aa1.64□□□□□ -2.15
RRP6YOR001W SRP102P36057 244 aaPredicted RBP1.64□□□□□ -2.15
RRP6YOR001W UTP30P36144 274 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W ICE2P40499 491 aa1.64□□□□□ -2.15
RRP6YOR001W SMD3P43321 101 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W OST2P46964 130 aa1.64□□□□□ -2.15
RRP6YOR001W MOG1P47123 218 aa1.64□□□□□ -2.15
RRP6YOR001W FLC3P53121 802 aa1.64□□□□□ -2.15
RRP6YOR001W COS6P53344 381 aa1.64□□□□□ -2.15
RRP6YOR001W HST4P53688 370 aa1.64□□□□□ -2.15
RRP6YOR001W ALG9P53868 555 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W YOR268CQ08734 132 aa1.64□□□□□ -2.15
RRP6YOR001W IES3Q12345 250 aa1.64□□□□□ -2.15
RRP6YOR001W EFG1Q3E705 233 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W FAB1P34756 2278 aa1.64□□□□□ -2.15
RRP6YOR001W RPL9AP05738 191 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W GLE2P40066 365 aa1.64□□□□□ -2.15
RRP6YOR001W RPL9BP51401 191 aaKnown RBP1.64□□□□□ -2.15
RRP6YOR001W MIG2P53035 382 aa1.64□□□□□ -2.15
RRP6YOR001W CAB4P53332 305 aa1.64□□□□□ -2.15
RRP6YOR001W PGA1P53896 198 aa1.64□□□□□ -2.15
RRP6YOR001W HSK3P69852 69 aa1.64□□□□□ -2.15
RRP6YOR001W GPI17Q04080 534 aa1.64□□□□□ -2.15
RRP6YOR001W YLR031WQ07978 186 aa1.64□□□□□ -2.15
RRP6YOR001W YPL162CQ12042 273 aa1.64□□□□□ -2.15
RRP6YOR001W MCP1Q12106 302 aa1.64□□□□□ -2.15
RRP6YOR001W BBP1Q12365 385 aa1.64□□□□□ -2.15
RRP6YOR001W PET20Q99373 253 aa1.64□□□□□ -2.15
RRP6YOR001W Q0255P03881 472 aa1.63□□□□□ -2.15
RRP6YOR001W CMD1P06787 147 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W ADH3P07246 375 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W RPB3P16370 318 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W ATG22P25568 528 aa1.63□□□□□ -2.15
RRP6YOR001W UBC8P28263 218 aa1.63□□□□□ -2.15
RRP6YOR001W TVP38P36164 337 aa1.63□□□□□ -2.15
RRP6YOR001W YAR068WP39564 161 aa1.63□□□□□ -2.15
RRP6YOR001W TIF34P40217 347 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W ARC15P40518 154 aaRIP-Chip data1.63□□□□□ -2.15not detected
RRP6YOR001W PFS2P42841 465 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W ARO8P53090 500 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W TRM12Q04235 462 aa1.63□□□□□ -2.15
RRP6YOR001W DYN3Q04949 312 aa1.63□□□□□ -2.15
RRP6YOR001W SHH4Q06236 168 aa1.63□□□□□ -2.15
RRP6YOR001W BRX1Q08235 291 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W YPR063CQ12160 140 aa1.63□□□□□ -2.15
RRP6YOR001W MPD1Q12404 318 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W YPR170W-BP0C5R9 85 aa1.63□□□□□ -2.15
RRP6YOR001W CCA1P21269 546 aa1.63□□□□□ -2.15
RRP6YOR001W SEC14P24280 304 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W MDH3P32419 343 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
RRP6YOR001W KDX1P36005 433 aa1.63□□□□□ -2.15
RRP6YOR001W YHR125WP38831 101 aa1.63□□□□□ -2.15
RRP6YOR001W AST2P39945 430 aaKnown RBP1.63□□□□□ -2.15
RRP6YOR001W SNX4P47057 423 aa1.63□□□□□ -2.15
RRP6YOR001W NQM1P53228 333 aaPredicted RBP1.63□□□□□ -2.15
RRP6YOR001W GAS3Q03655 524 aa1.63□□□□□ -2.15
RRP6YOR001W AIM34Q03673 198 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms