RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YKR104WP0CE69 306 aa8.37□□□□□ -1.07
SPT20YOL148C STE18P18852 110 aa8.37□□□□□ -1.07
SPT20YOL148C MIX23P38162 196 aa8.37□□□□□ -1.07
SPT20YOL148C VEL1P53058 206 aa8.37□□□□□ -1.07
SPT20YOL148C YMR090WQ04304 227 aaKnown RBP8.37□□□□□ -1.07
SPT20YOL148C URA5P13298 226 aaKnown RBP8.36□□□□□ -1.07
SPT20YOL148C GLC7P32598 312 aaKnown RBP8.36□□□□□ -1.07
SPT20YOL148C SOL3P38858 249 aa8.36□□□□□ -1.07
SPT20YOL148C CDC40P40968 455 aaPredicted RBP8.36□□□□□ -1.07
SPT20YOL148C DAD3P69850 94 aa8.36□□□□□ -1.07
SPT20YOL148C GIS1Q03833 894 aa8.36□□□□□ -1.07
SPT20YOL148C YLR111WQ12528 110 aa8.36□□□□□ -1.07
SPT20YOL148C COA2Q3E823 68 aa8.36□□□□□ -1.07
SPT20YOL148C POR1P04840 283 aaKnown RBP8.36□□□□□ -1.07
SPT20YOL148C OPI3P05375 206 aa8.36□□□□□ -1.07
SPT20YOL148C AGP1P25376 633 aa8.36□□□□□ -1.07
SPT20YOL148C YJU3P28321 313 aa8.36□□□□□ -1.07
SPT20YOL148C COQ10Q08058 207 aa8.36□□□□□ -1.07
SPT20YOL148C REX3Q12090 404 aa8.36□□□□□ -1.07
SPT20YOL148C COX2P00410 251 aa8.35□□□□□ -1.07
SPT20YOL148C SPO13P23624 291 aa8.35□□□□□ -1.07
SPT20YOL148C PMU1P36069 295 aa8.35□□□□□ -1.07
SPT20YOL148C DOG1P38774 246 aa8.35□□□□□ -1.07
SPT20YOL148C RPB11P38902 120 aa8.35□□□□□ -1.07
SPT20YOL148C LST7P53237 242 aa8.35□□□□□ -1.07
SPT20YOL148C YML053CQ04978 212 aa8.35□□□□□ -1.07
SPT20YOL148C BSC6Q08280 497 aa8.35□□□□□ -1.07
SPT20YOL148C VPS68Q12016 184 aa8.35□□□□□ -1.07
SPT20YOL148C FRE7Q12333 620 aa8.35□□□□□ -1.07
SPT20YOL148C NPC2Q12408 173 aa8.35□□□□□ -1.07
SPT20YOL148C ADE8P04161 214 aa8.34□□□□□ -1.07
SPT20YOL148C MEK1P24719 497 aaPredicted RBP8.34□□□□□ -1.07
SPT20YOL148C SUA7P29055 345 aaPredicted RBP8.34□□□□□ -1.07
SPT20YOL148C AGA2P32781 87 aa8.34□□□□□ -1.07
SPT20YOL148C YER188WP40103 239 aa8.34□□□□□ -1.07
SPT20YOL148C SKP1P52286 194 aa8.34□□□□□ -1.07
SPT20YOL148C MTO1P53070 669 aa8.34□□□□□ -1.07
SPT20YOL148C RPN14P53196 417 aa8.34□□□□□ -1.07
SPT20YOL148C THG1P53215 237 aaKnown RBP8.34□□□□□ -1.07
SPT20YOL148C DIG2Q03373 323 aaKnown RBP8.34□□□□□ -1.07
SPT20YOL148C RPC11Q04307 110 aaPredicted RBP8.34□□□□□ -1.07
SPT20YOL148C ATG10Q07879 167 aa8.34□□□□□ -1.07
SPT20YOL148C YPL257WQ08974 193 aa8.34□□□□□ -1.07
SPT20YOL148C PRR2Q12310 699 aa8.34□□□□□ -1.07
SPT20YOL148C MDH2P22133 377 aa8.33□□□□□ -1.08
SPT20YOL148C UTR5P32630 166 aa8.33□□□□□ -1.08
SPT20YOL148C YKL102CP34249 101 aa8.33□□□□□ -1.08
SPT20YOL148C TTI2P47168 421 aa8.33□□□□□ -1.08
SPT20YOL148C MSO1P53604 210 aaKnown RBP8.33□□□□□ -1.08
SPT20YOL148C MPP6P53725 186 aaPredicted RBP8.33□□□□□ -1.08
SPT20YOL148C RNH201P53942 307 aa8.33□□□□□ -1.08
SPT20YOL148C AGE1Q04412 482 aa8.33□□□□□ -1.08
SPT20YOL148C MRPL1Q04599 285 aa8.33□□□□□ -1.08
SPT20YOL148C YLR179CQ06252 201 aaKnown RBP8.33□□□□□ -1.08
SPT20YOL148C IZH3Q07959 543 aa8.33□□□□□ -1.08
SPT20YOL148C FMP49A0A023PZB3 126 aa8.33□□□□□ -1.08
SPT20YOL148C YDR157WA0A023PZE8 133 aa8.33□□□□□ -1.08
SPT20YOL148C MDM35O60200 86 aa8.33□□□□□ -1.08
SPT20YOL148C MSW1P04803 379 aa8.33□□□□□ -1.08
SPT20YOL148C YGL010WP25338 174 aa8.33□□□□□ -1.08
SPT20YOL148C YCR025CP25352 136 aa8.33□□□□□ -1.08
SPT20YOL148C PEX4P29340 183 aa8.33□□□□□ -1.08
SPT20YOL148C YKL187CP34231 750 aa8.33□□□□□ -1.08
SPT20YOL148C DAD2P36162 133 aa8.33□□□□□ -1.08
SPT20YOL148C YBR197CP38306 217 aa8.33□□□□□ -1.08
SPT20YOL148C AME1P38313 324 aa8.33□□□□□ -1.08
SPT20YOL148C YCK3P39962 524 aa8.33□□□□□ -1.08
SPT20YOL148C SAM50P53969 484 aa8.33□□□□□ -1.08
SPT20YOL148C PET191Q02772 108 aa8.33□□□□□ -1.08
SPT20YOL148C STP4Q07351 490 aa8.33□□□□□ -1.08
SPT20YOL148C RFU1Q08003 200 aa8.33□□□□□ -1.08
SPT20YOL148C YMR084WA2P2R3 262 aa8.32□□□□□ -1.08
SPT20YOL148C DDI2P0CH63 225 aa8.32□□□□□ -1.08
SPT20YOL148C DDI3P0CH64 225 aa8.32□□□□□ -1.08
SPT20YOL148C MIG1P27705 504 aa8.32□□□□□ -1.08
SPT20YOL148C AHT1P29589 182 aa8.32□□□□□ -1.08
SPT20YOL148C FRM2P37261 193 aa8.32□□□□□ -1.08
SPT20YOL148C OM14P38325 134 aa8.32□□□□□ -1.08
SPT20YOL148C RPF1P38805 295 aaKnown RBP8.32□□□□□ -1.08
SPT20YOL148C PAC2P39937 518 aa8.32□□□□□ -1.08
SPT20YOL148C TRM9P49957 279 aa8.32□□□□□ -1.08
SPT20YOL148C MIC26P50087 233 aa8.32□□□□□ -1.08
SPT20YOL148C TPC1P53257 314 aa8.32□□□□□ -1.08
SPT20YOL148C YGR250CP53316 781 aaKnown RBP8.32□□□□□ -1.08
SPT20YOL148C DFG5Q05031 458 aa8.32□□□□□ -1.08
SPT20YOL148C COQ11Q05892 277 aa8.32□□□□□ -1.08
SPT20YOL148C CTS2Q06350 511 aa8.32□□□□□ -1.08
SPT20YOL148C YOL024WQ08172 172 aa8.32□□□□□ -1.08
SPT20YOL148C GSP1P32835 219 aaKnown RBP8.31□□□□□ -1.08
SPT20YOL148C GSP2P32836 220 aaKnown RBP8.31□□□□□ -1.08
SPT20YOL148C PAU16P35994 123 aa8.31□□□□□ -1.08
SPT20YOL148C PIC2P40035 300 aa8.31□□□□□ -1.08
SPT20YOL148C UPS3Q04006 179 aa8.31□□□□□ -1.08
SPT20YOL148C MSC3Q05812 728 aa8.31□□□□□ -1.08
SPT20YOL148C TPT1Q12272 230 aaKnown RBP8.31□□□□□ -1.08
SPT20YOL148C YPR071WQ12346 211 aa8.31□□□□□ -1.08
SPT20YOL148C YPR170W-BP0C5R9 85 aa8.31□□□□□ -1.08
SPT20YOL148C RPL20AP0CX23 172 aaKnown RBP8.31□□□□□ -1.08
SPT20YOL148C RPL20BP0CX24 172 aaPredicted RBP8.31□□□□□ -1.08
SPT20YOL148C RPL1AP0CX43 217 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms