RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeastyeast

Gene HRT1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT1YOL133W TAF14P35189 244 aa2.49□□□□□ -2.01
HRT1YOL133W LSM4P40070 187 aaKnown RBP2.49□□□□□ -2.01
HRT1YOL133W YER135CP40082 130 aa2.49□□□□□ -2.01
HRT1YOL133W ICE2P40499 491 aa2.49□□□□□ -2.01
HRT1YOL133W ADO1P47143 340 aaKnown RBP2.49□□□□□ -2.01
HRT1YOL133W DOC1P53068 250 aa2.49□□□□□ -2.01
HRT1YOL133W BOL2P53082 120 aa2.49□□□□□ -2.01
HRT1YOL133W YMD8Q03697 442 aa2.49□□□□□ -2.01
HRT1YOL133W GIS3Q12418 502 aa2.49□□□□□ -2.01
HRT1YOL133W UTP30P36144 274 aaKnown RBP2.48□□□□□ -2.01
HRT1YOL133W YRB2P40517 327 aa2.48□□□□□ -2.01
HRT1YOL133W RPL33BP41056 107 aaKnown RBP2.48□□□□□ -2.01
HRT1YOL133W AIF1P52923 378 aa2.48□□□□□ -2.01
HRT1YOL133W ERG25P53045 309 aa2.48□□□□□ -2.01
HRT1YOL133W MCP1Q12106 302 aa2.48□□□□□ -2.01
HRT1YOL133W TDA8Q6B2U8 126 aa2.48□□□□□ -2.01
HRT1YOL133W RPL28P02406 149 aaKnown RBP2.47□□□□□ -2.01
HRT1YOL133W ATG22P25568 528 aa2.47□□□□□ -2.01
HRT1YOL133W DSE2P38844 325 aa2.47□□□□□ -2.01
HRT1YOL133W PGD1P40356 397 aa2.47□□□□□ -2.01
HRT1YOL133W YGR050CP53231 118 aa2.47□□□□□ -2.01
HRT1YOL133W PGA2P53903 129 aa2.47□□□□□ -2.01
HRT1YOL133W RPL27BP0C2H7 136 aaKnown RBP2.46□□□□□ -2.02
HRT1YOL133W STE18P18852 110 aa2.46□□□□□ -2.02
HRT1YOL133W MDH2P22133 377 aa2.46□□□□□ -2.02
HRT1YOL133W IDH1P28834 360 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
HRT1YOL133W TCD1P38756 429 aa2.46□□□□□ -2.02
HRT1YOL133W AVT2P39981 480 aa2.46□□□□□ -2.02
HRT1YOL133W AGE2P40529 298 aa2.46□□□□□ -2.02
HRT1YOL133W PDR17P53844 350 aa2.46□□□□□ -2.02
HRT1YOL133W SWP1Q02795 286 aa2.46□□□□□ -2.02
HRT1YOL133W JLP1Q12358 412 aa2.46□□□□□ -2.02
HRT1YOL133W TIR3P40552 269 aa2.45□□□□□ -2.02
HRT1YOL133W GAS3Q03655 524 aa2.45□□□□□ -2.02
HRT1YOL133W YNG1Q08465 219 aa2.45□□□□□ -2.02
HRT1YOL133W MRPL17P36528 281 aa2.44□□□□□ -2.02
HRT1YOL133W YFR054CP43622 192 aa2.44□□□□□ -2.02
HRT1YOL133W IRC18P47056 224 aa2.44□□□□□ -2.02
HRT1YOL133W GRX3Q03835 250 aa2.44□□□□□ -2.02
HRT1YOL133W JIP3O13555 125 aa2.43□□□□□ -2.02
HRT1YOL133W SML1Q04964 104 aa2.43□□□□□ -2.02
HRT1YOL133W PDR18P53756 1333 aa2.42□□□□□ -2.02
HRT1YOL133W TUS1Q06412 1307 aa2.42□□□□□ -2.02
HRT1YOL133W GCN3P14741 305 aa2.42□□□□□ -2.02
HRT1YOL133W MRPL28P36527 147 aa2.42□□□□□ -2.02
HRT1YOL133W SNZ1Q03148 297 aa2.42□□□□□ -2.02
HRT1YOL133W YDR249CQ03787 373 aa2.42□□□□□ -2.02
HRT1YOL133W RFA3P26755 122 aaKnown RBP2.41□□□□□ -2.02
HRT1YOL133W UMP1P38293 148 aa2.41□□□□□ -2.02
HRT1YOL133W YNR077CP53758 84 aa2.41□□□□□ -2.02
HRT1YOL133W GGA1Q06336 557 aa2.41□□□□□ -2.02
HRT1YOL133W YCL012CQ8J0M4 134 aa2.41□□□□□ -2.02
HRT1YOL133W TIM9O74700 87 aa2.4□□□□□ -2.03
HRT1YOL133W CDC36P06100 191 aaPredicted RBP2.4□□□□□ -2.03
HRT1YOL133W IKI1P38874 309 aa2.4□□□□□ -2.03
HRT1YOL133W YHR214C-EQ8TGK0 99 aa2.4□□□□□ -2.03
HRT1YOL133W FZF1P32805 299 aa2.39□□□□□ -2.03
HRT1YOL133W GLE2P40066 365 aa2.39□□□□□ -2.03
HRT1YOL133W YNL217WP40152 326 aa2.39□□□□□ -2.03
HRT1YOL133W LSM7P53905 115 aaKnown RBP2.39□□□□□ -2.03
HRT1YOL133W BUD25P85052 153 aa2.39□□□□□ -2.03
HRT1YOL133W YLR162WQ06235 118 aa2.39□□□□□ -2.03
HRT1YOL133W YPL162CQ12042 273 aa2.39□□□□□ -2.03
HRT1YOL133W TSC3Q3E790 80 aa2.39□□□□□ -2.03
HRT1YOL133W RPB4P20433 221 aaPredicted RBP2.38□□□□□ -2.03
HRT1YOL133W SPS18P32572 300 aa2.38□□□□□ -2.03
HRT1YOL133W YKT6P36015 200 aaKnown RBP2.38□□□□□ -2.03
HRT1YOL133W YCR087C-AP37263 153 aa2.38□□□□□ -2.03
HRT1YOL133W COG5P53951 403 aa2.38□□□□□ -2.03
HRT1YOL133W FSF1Q12029 327 aaKnown RBP2.38□□□□□ -2.03
HRT1YOL133W YFR032C-BQ8TGU2 87 aa2.38□□□□□ -2.03
HRT1YOL133W CYR1P08678 2026 aaKnown RBP2.37□□□□□ -2.03
HRT1YOL133W ATP15P21306 62 aa2.37□□□□□ -2.03
HRT1YOL133W MRPS28P21771 286 aa2.37□□□□□ -2.03
HRT1YOL133W MGM101P32787 269 aaKnown RBP2.37□□□□□ -2.03
HRT1YOL133W YBR219CP38317 127 aa2.37□□□□□ -2.03
HRT1YOL133W AST2P39945 430 aaKnown RBP2.37□□□□□ -2.03
HRT1YOL133W GVP36P40531 326 aaKnown RBP2.37□□□□□ -2.03
HRT1YOL133W BNA7Q04066 261 aa2.37□□□□□ -2.03
HRT1YOL133W KSS1P14681 368 aa2.36□□□□□ -2.03
HRT1YOL133W MER1P16523 270 aa2.36□□□□□ -2.03
HRT1YOL133W NTG1P31378 399 aa2.36□□□□□ -2.03
HRT1YOL133W PTM1P32857 523 aa2.36□□□□□ -2.03
HRT1YOL133W GAA1P39012 614 aa2.36□□□□□ -2.03
HRT1YOL133W CSI2Q08054 341 aa2.36□□□□□ -2.03
HRT1YOL133W GPM2Q12008 311 aa2.36□□□□□ -2.03
HRT1YOL133W RPB3P16370 318 aaKnown RBP2.35□□□□□ -2.03
HRT1YOL133W YGL010WP25338 174 aa2.35□□□□□ -2.03
HRT1YOL133W YBR220CP38318 560 aa2.35□□□□□ -2.03
HRT1YOL133W VTC1P40046 129 aaRIP-Chip data2.35□□□□□ -2.03not detected
HRT1YOL133W ERG10P41338 398 aaKnown RBP2.35□□□□□ -2.03
HRT1YOL133W CUS2P53830 285 aaPredicted RBP2.35□□□□□ -2.03
HRT1YOL133W ADF1Q2V2Q1 113 aa2.35□□□□□ -2.03
HRT1YOL133W UPS2P35200 230 aa2.34□□□□□ -2.03
HRT1YOL133W YET1P35723 206 aa2.34□□□□□ -2.03
HRT1YOL133W POP3P53833 195 aaPredicted RBP2.34□□□□□ -2.03
HRT1YOL133W MAG1P22134 296 aaKnown RBP2.33□□□□□ -2.04
HRT1YOL133W SNC2P33328 115 aa2.33□□□□□ -2.04
HRT1YOL133W YKR045CP36138 183 aa2.33□□□□□ -2.04
HRT1YOL133W RMD6P39975 231 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms