RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W PET54P10834 293 aa3.07□□□□□ -1.92
VPS27YNR006W ARO2P28777 376 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W GIM4P40005 111 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W AGE2P40529 298 aa3.07□□□□□ -1.92
VPS27YNR006W YJL028WP47062 111 aa3.07□□□□□ -1.92
VPS27YNR006W PGU1P47180 361 aa3.07□□□□□ -1.92
VPS27YNR006W PRM8P53174 237 aa3.07□□□□□ -1.92
VPS27YNR006W YGR050CP53231 118 aa3.07□□□□□ -1.92
VPS27YNR006W COS6P53344 381 aa3.07□□□□□ -1.92
VPS27YNR006W MDM32Q12171 622 aa3.07□□□□□ -1.92
VPS27YNR006W DFM1Q12743 341 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W YDL085C-AQ3E7B7 68 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W YBL112CQ3E7Y4 105 aa3.07□□□□□ -1.92
VPS27YNR006W DNF1P32660 1571 aa3.06□□□□□ -1.92
VPS27YNR006W GEA1P47102 1408 aaPredicted RBP3.06□□□□□ -1.92
VPS27YNR006W YBL081WP38180 368 aaKnown RBP3.06□□□□□ -1.92
VPS27YNR006W SYS1P41544 203 aa3.06□□□□□ -1.92
VPS27YNR006W FMP32P43557 207 aa3.06□□□□□ -1.92
VPS27YNR006W YGL262WP53054 175 aa3.06□□□□□ -1.92
VPS27YNR006W YOL029CQ08187 201 aa3.06□□□□□ -1.92
VPS27YNR006W RPA190P10964 1664 aaKnown RBP3.06□□□□□ -1.92
VPS27YNR006W PAN1P32521 1480 aa3.06□□□□□ -1.92
VPS27YNR006W TSC11P40061 1430 aa3.05□□□□□ -1.92
VPS27YNR006W CDC7P06243 507 aa3.05□□□□□ -1.92
VPS27YNR006W RPB9P27999 122 aa3.05□□□□□ -1.92
VPS27YNR006W SLM6P38343 150 aa3.05□□□□□ -1.92
VPS27YNR006W SPL2P38839 148 aa3.05□□□□□ -1.92
VPS27YNR006W YER189WP40104 122 aa3.05□□□□□ -1.92
VPS27YNR006W YGR042WP53227 271 aa3.05□□□□□ -1.92
VPS27YNR006W MPA43P53583 542 aaPredicted RBP3.05□□□□□ -1.92
VPS27YNR006W DID2P69771 204 aa3.05□□□□□ -1.92
VPS27YNR006W HNT1Q04344 158 aaKnown RBP3.05□□□□□ -1.92
VPS27YNR006W PEX11Q12462 236 aa3.05□□□□□ -1.92
VPS27YNR006W EFG1Q3E705 233 aaKnown RBP3.05□□□□□ -1.92
VPS27YNR006W TY3B-GQ99315 1547 aa3.05□□□□□ -1.92
VPS27YNR006W NTE1Q04958 1679 aa3.05□□□□□ -1.92
VPS27YNR006W IPP1P00817 287 aaKnown RBP3.05□□□□□ -1.92
VPS27YNR006W SIR2P06700 562 aa3.05□□□□□ -1.92
VPS27YNR006W AHC2P25649 128 aa3.05□□□□□ -1.92
VPS27YNR006W RPA43P46669 326 aa3.05□□□□□ -1.92
VPS27YNR006W ILM1P47155 203 aa3.05□□□□□ -1.92
VPS27YNR006W COQ5P49017 307 aa3.05□□□□□ -1.92
VPS27YNR006W YNL010WP53981 241 aaKnown RBP3.05□□□□□ -1.92
VPS27YNR006W YMR317WQ04893 1140 aa3.05□□□□□ -1.92
VPS27YNR006W YBT1P32386 1661 aa3.04□□□□□ -1.92
VPS27YNR006W RPO21P04050 1733 aaKnown RBP3.04□□□□□ -1.92
VPS27YNR006W RPL25P04456 142 aaKnown RBP3.04□□□□□ -1.92
VPS27YNR006W CMD1P06787 147 aaKnown RBP3.04□□□□□ -1.92
VPS27YNR006W SEC22P22214 214 aa3.04□□□□□ -1.92
VPS27YNR006W CNB1P25296 175 aa3.04□□□□□ -1.92
VPS27YNR006W ERG24P32462 438 aaKnown RBP3.04□□□□□ -1.92
VPS27YNR006W YHL044WP38727 235 aa3.04□□□□□ -1.92
VPS27YNR006W CYC2P38909 366 aa3.04□□□□□ -1.92
VPS27YNR006W IRC22P40006 225 aa3.04□□□□□ -1.92
VPS27YNR006W UFD1P53044 361 aa3.04□□□□□ -1.92
VPS27YNR006W YGL118CP53132 145 aa3.04□□□□□ -1.92
VPS27YNR006W UPS2P35200 230 aa3.03□□□□□ -1.92
VPS27YNR006W FMP23P38231 175 aa3.03□□□□□ -1.92
VPS27YNR006W HMF1P40037 129 aaKnown RBP3.03□□□□□ -1.92
VPS27YNR006W MIC19P43594 170 aa3.03□□□□□ -1.92
VPS27YNR006W RPE1P46969 238 aa3.03□□□□□ -1.92
VPS27YNR006W OSH6Q02201 448 aa3.03□□□□□ -1.92
VPS27YNR006W NIP7Q08962 181 aaKnown RBP3.03□□□□□ -1.92
VPS27YNR006W YAL067W-AQ8TGK6 75 aa3.03□□□□□ -1.92
VPS27YNR006W YOL085CQ99345 113 aa3.03□□□□□ -1.92
VPS27YNR006W EPT1P22140 391 aa3.03□□□□□ -1.93
VPS27YNR006W SCO1P23833 295 aa3.03□□□□□ -1.93
VPS27YNR006W MSA2P36157 363 aa3.03□□□□□ -1.93
VPS27YNR006W SWD3P38123 315 aa3.03□□□□□ -1.93
VPS27YNR006W SSH1P38353 490 aaKnown RBP3.03□□□□□ -1.93
VPS27YNR006W YAP3P38749 330 aa3.03□□□□□ -1.93
VPS27YNR006W DOG2P38773 246 aa3.03□□□□□ -1.93
VPS27YNR006W ASP1P38986 381 aaPredicted RBP3.03□□□□□ -1.93
VPS27YNR006W RRT13P40042 185 aa3.03□□□□□ -1.93
VPS27YNR006W SNM1P40993 198 aa3.03□□□□□ -1.93
VPS27YNR006W YGL204CP53089 101 aa3.03□□□□□ -1.93
VPS27YNR006W BOR1P53838 576 aa3.03□□□□□ -1.93
VPS27YNR006W YPL247CQ12523 523 aa3.03□□□□□ -1.93
VPS27YNR006W NUP170P38181 1502 aa3.02□□□□□ -1.93
VPS27YNR006W SNT2P53127 1403 aa3.02□□□□□ -1.93
VPS27YNR006W MBF1O14467 151 aaKnown RBP3.02□□□□□ -1.93
VPS27YNR006W SNF4P12904 322 aa3.02□□□□□ -1.93
VPS27YNR006W BDH1P39714 382 aa3.02□□□□□ -1.93
VPS27YNR006W AIM34Q03673 198 aa3.02□□□□□ -1.93
VPS27YNR006W ECM11Q04110 302 aa3.02□□□□□ -1.93
VPS27YNR006W HPT1Q04178 221 aaKnown RBP3.02□□□□□ -1.93
VPS27YNR006W GRH1Q04410 372 aaKnown RBP3.02□□□□□ -1.93
VPS27YNR006W SHH4Q06236 168 aa3.02□□□□□ -1.93
VPS27YNR006W RRG7Q08774 242 aaPredicted RBP3.02□□□□□ -1.93
VPS27YNR006W MHT1Q12525 324 aa3.02□□□□□ -1.93
VPS27YNR006W TDA8Q6B2U8 126 aa3.02□□□□□ -1.93
VPS27YNR006W HTL1Q9URQ5 78 aa3.02□□□□□ -1.93
VPS27YNR006W YRF1-1P0CX20 1796 aa3.02□□□□□ -1.93
VPS27YNR006W YRF1-5P0CX21 1796 aa3.02□□□□□ -1.93
VPS27YNR006W YRF1-8P0CX22 1796 aa3.02□□□□□ -1.93
VPS27YNR006W BUD3P25558 1636 aa3.01□□□□□ -1.93
VPS27YNR006W YLR462WO13556 202 aa3.01□□□□□ -1.93
VPS27YNR006W MAG1P22134 296 aaKnown RBP3.01□□□□□ -1.93
VPS27YNR006W UTP30P36144 274 aaKnown RBP3.01□□□□□ -1.93
VPS27YNR006W MRPL27P36526 146 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms