RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W RBL2P48606 106 aaKnown RBP1.59□□□□□ -2.16
HSH155YMR288W UBC12P52491 188 aa1.59□□□□□ -2.16
HSH155YMR288W USE1P53146 245 aa1.59□□□□□ -2.16
HSH155YMR288W CPD1P53314 239 aa1.59□□□□□ -2.16
HSH155YMR288W CAF40P53829 373 aa1.59□□□□□ -2.16
HSH155YMR288W PDR17P53844 350 aa1.59□□□□□ -2.16
HSH155YMR288W ARL3Q02804 198 aa1.59□□□□□ -2.16
HSH155YMR288W YDR476CQ03362 224 aa1.59□□□□□ -2.16
HSH155YMR288W GAT3Q07928 141 aa1.59□□□□□ -2.16
HSH155YMR288W FYV7Q12247 151 aa1.59□□□□□ -2.16
HSH155YMR288W ORT1Q12375 292 aa1.59□□□□□ -2.16
HSH155YMR288W YCL001W-BQ96VH2 84 aa1.59□□□□□ -2.16
HSH155YMR288W ADK1P07170 222 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W TFS1P14306 219 aa1.58□□□□□ -2.16
HSH155YMR288W RPS1BP23248 255 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W SLM5P25345 492 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W YBR137WP38276 179 aa1.58□□□□□ -2.16
HSH155YMR288W CUE1P38428 203 aa1.58□□□□□ -2.16
HSH155YMR288W ISC1P40015 477 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W CUP9P41817 306 aa1.58□□□□□ -2.16
HSH155YMR288W KEG1P43614 200 aa1.58□□□□□ -2.16
HSH155YMR288W CCC1P47818 322 aa1.58□□□□□ -2.16
HSH155YMR288W UBC13P52490 153 aa1.58□□□□□ -2.16
HSH155YMR288W TPN1P53099 579 aa1.58□□□□□ -2.16
HSH155YMR288W MPA43P53583 542 aaPredicted RBP1.58□□□□□ -2.16
HSH155YMR288W HCH1P53834 153 aa1.58□□□□□ -2.16
HSH155YMR288W YDR209CQ03480 137 aa1.58□□□□□ -2.16
HSH155YMR288W YMR320WQ04897 101 aa1.58□□□□□ -2.16
HSH155YMR288W HRI1Q05905 244 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W FRQ1Q06389 190 aa1.58□□□□□ -2.16
HSH155YMR288W OCA6Q12454 224 aa1.58□□□□□ -2.16
HSH155YMR288W YKL068W-AQ3E826 78 aa1.58□□□□□ -2.16
HSH155YMR288W MRS1P07266 363 aa1.58□□□□□ -2.16
HSH155YMR288W SEC4P07560 215 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W ZWF1P11412 505 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W CTA1P15202 515 aa1.58□□□□□ -2.16
HSH155YMR288W AMD1P15274 810 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W KTI12P34253 313 aaKnown RBP1.58□□□□□ -2.16
HSH155YMR288W FRE2P36033 711 aa1.58□□□□□ -2.16
HSH155YMR288W GPX2P38143 162 aa1.58□□□□□ -2.16
HSH155YMR288W YHL037CP38733 133 aa1.58□□□□□ -2.16
HSH155YMR288W YIL054WP40524 105 aa1.58□□□□□ -2.16
HSH155YMR288W GWT1P47026 490 aa1.58□□□□□ -2.16
HSH155YMR288W TIM13P53299 105 aa1.58□□□□□ -2.16
HSH155YMR288W SCW10Q04951 389 aa1.58□□□□□ -2.16
HSH155YMR288W BCH1Q05029 724 aa1.58□□□□□ -2.16
HSH155YMR288W TAZ1Q06510 381 aa1.58□□□□□ -2.16
HSH155YMR288W YLL056CQ12177 298 aa1.58□□□□□ -2.16
HSH155YMR288W AYT1Q12226 474 aa1.58□□□□□ -2.16
HSH155YMR288W TRM10Q12400 293 aa1.58□□□□□ -2.16
HSH155YMR288W YOP1Q12402 180 aa1.58□□□□□ -2.16
HSH155YMR288W RIB3Q99258 208 aa1.58□□□□□ -2.16
HSH155YMR288W CBP6P07253 162 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W RPS28BP0C0X0 67 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W ZRT1P32804 376 aa1.57□□□□□ -2.16
HSH155YMR288W TIR2P33890 251 aa1.57□□□□□ -2.16
HSH155YMR288W JEN1P36035 616 aa1.57□□□□□ -2.16
HSH155YMR288W FMP23P38231 175 aa1.57□□□□□ -2.16
HSH155YMR288W ECM33P38248 429 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W YPC1P38298 316 aa1.57□□□□□ -2.16
HSH155YMR288W YGP1P38616 354 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W ECM14P38836 430 aa1.57□□□□□ -2.16
HSH155YMR288W YEL075CP39972 122 aa1.57□□□□□ -2.16
HSH155YMR288W RGI1P40043 161 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W PRM8P53174 237 aa1.57□□□□□ -2.16
HSH155YMR288W VHT1P53241 593 aa1.57□□□□□ -2.16
HSH155YMR288W FRE4P53746 719 aa1.57□□□□□ -2.16
HSH155YMR288W PET191Q02772 108 aa1.57□□□□□ -2.16
HSH155YMR288W PKR1Q03880 122 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W SEI1Q06058 285 aa1.57□□□□□ -2.16
HSH155YMR288W SFH1Q06168 426 aa1.57□□□□□ -2.16
HSH155YMR288W SWC7Q06707 132 aa1.57□□□□□ -2.16
HSH155YMR288W HRD1Q08109 551 aa1.57□□□□□ -2.16
HSH155YMR288W POM33Q12164 279 aa1.57□□□□□ -2.16
HSH155YMR288W MDM32Q12171 622 aa1.57□□□□□ -2.16
HSH155YMR288W RFM1Q12192 310 aa1.57□□□□□ -2.16
HSH155YMR288W MRX4Q12467 430 aa1.57□□□□□ -2.16
HSH155YMR288W RPS28AQ3E7X9 67 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W YBR298C-AQ8TGK4 73 aa1.57□□□□□ -2.16
HSH155YMR288W COX5AP00424 153 aa1.57□□□□□ -2.16
HSH155YMR288W RPL28P02406 149 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W REP1P03871 373 aa1.57□□□□□ -2.16
HSH155YMR288W YCR100CP25606 316 aa1.57□□□□□ -2.16
HSH155YMR288W BUD23P25627 275 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W TAH1P25638 111 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W APE2P32454 952 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W HEK2P38199 381 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
HSH155YMR288W RBG1P39729 369 aa1.57□□□□□ -2.16
HSH155YMR288W YER189WP40104 122 aa1.57□□□□□ -2.16
HSH155YMR288W YIL029CP40538 142 aa1.57□□□□□ -2.16
HSH155YMR288W MOB2P43563 287 aa1.57□□□□□ -2.16
HSH155YMR288W WWM1P43582 211 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W ILM1P47155 203 aa1.57□□□□□ -2.16
HSH155YMR288W PAC10P48363 199 aa1.57□□□□□ -2.16
HSH155YMR288W WSC2P53832 503 aa1.57□□□□□ -2.16
HSH155YMR288W YDR249CQ03787 373 aa1.57□□□□□ -2.16
HSH155YMR288W YTH1Q06102 208 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W RDL2Q08742 149 aaKnown RBP1.57□□□□□ -2.16
HSH155YMR288W YGK3Q12222 375 aaPredicted RBP1.57□□□□□ -2.16
HSH155YMR288W HHF1P02309 103 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms