RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W YRF1-6P53819 1859 aa2.73□□□□□ -1.97
TAF4YMR005W RAS2P01120 322 aaKnown RBP2.72□□□□□ -1.97
TAF4YMR005W LSM4P40070 187 aaKnown RBP2.72□□□□□ -1.97
TAF4YMR005W CIS3P47001 227 aa2.72□□□□□ -1.97
TAF4YMR005W YJR056CP47115 236 aa2.72□□□□□ -1.97
TAF4YMR005W EAF6P47128 113 aa2.72□□□□□ -1.97
TAF4YMR005W ILM1P47155 203 aa2.72□□□□□ -1.97
TAF4YMR005W YGR219WP53307 113 aa2.72□□□□□ -1.97
TAF4YMR005W RPS5P26783 225 aaKnown RBP2.71□□□□□ -1.98
TAF4YMR005W YAR068WP39564 161 aa2.71□□□□□ -1.98
TAF4YMR005W RRN5Q02983 363 aa2.71□□□□□ -1.98
TAF4YMR005W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
TAF4YMR005W MSA1Q08471 629 aa2.71□□□□□ -1.98
TAF4YMR005W YOR020W-AQ3E824 90 aa2.71□□□□□ -1.98
TAF4YMR005W MLP1Q02455 1875 aaKnown RBP2.71□□□□□ -1.98
TAF4YMR005W YLR419WQ06698 1435 aaKnown RBP2.7□□□□□ -1.98
TAF4YMR005W RPF1P38805 295 aaKnown RBP2.7□□□□□ -1.98
TAF4YMR005W FMC1P40491 155 aa2.7□□□□□ -1.98
TAF4YMR005W CAT5P41735 233 aa2.7□□□□□ -1.98
TAF4YMR005W RPA43P46669 326 aa2.7□□□□□ -1.98
TAF4YMR005W NIP7Q08962 181 aaKnown RBP2.7□□□□□ -1.98
TAF4YMR005W YPL229WQ99395 206 aa2.7□□□□□ -1.98
TAF4YMR005W TOM1Q03280 3268 aa2.69□□□□□ -1.98
TAF4YMR005W YIL177CP40434 1758 aa2.69□□□□□ -1.98
TAF4YMR005W YJL225CP40889 1758 aa2.69□□□□□ -1.98
TAF4YMR005W MSW1P04803 379 aa2.69□□□□□ -1.98
TAF4YMR005W GRX2P17695 143 aaKnown RBP2.69□□□□□ -1.98
TAF4YMR005W PHO88P38264 188 aaPredicted RBP2.69□□□□□ -1.98
TAF4YMR005W PEP8P40335 379 aa2.69□□□□□ -1.98
TAF4YMR005W NEJ1Q06148 342 aa2.69□□□□□ -1.98
TAF4YMR005W RPO41P13433 1351 aaKnown RBP2.69□□□□□ -1.98
TAF4YMR005W APC1P53886 1748 aa2.68□□□□□ -1.98
TAF4YMR005W MRPL25P23369 157 aa2.68□□□□□ -1.98
TAF4YMR005W ERG25P53045 309 aa2.68□□□□□ -1.98
TAF4YMR005W FCY2P17064 533 aa2.67□□□□□ -1.98
TAF4YMR005W OAC1P32332 324 aa2.67□□□□□ -1.98
TAF4YMR005W LDB7P38210 180 aa2.67□□□□□ -1.98
TAF4YMR005W YIL001WP40560 513 aa2.67□□□□□ -1.98
TAF4YMR005W PET117Q02771 107 aa2.67□□□□□ -1.98
TAF4YMR005W ARR2Q06597 130 aa2.67□□□□□ -1.98
TAF4YMR005W ECM33P38248 429 aaKnown RBP2.66□□□□□ -1.98
TAF4YMR005W ERV15P38312 142 aa2.66□□□□□ -1.98
TAF4YMR005W CUE1P38428 203 aa2.66□□□□□ -1.98
TAF4YMR005W BMT5P40493 336 aa2.66□□□□□ -1.98
TAF4YMR005W NUP84P52891 726 aa2.66□□□□□ -1.98
TAF4YMR005W YML096WQ04489 525 aa2.66□□□□□ -1.98
TAF4YMR005W SSQ1Q05931 657 aaPredicted RBP2.66□□□□□ -1.98
TAF4YMR005W HEM25Q07534 307 aa2.66□□□□□ -1.98
TAF4YMR005W RIM15P43565 1770 aa2.66□□□□□ -1.98
TAF4YMR005W SNF2P22082 1703 aa2.65□□□□□ -1.98
TAF4YMR005W RPO26P20435 155 aa2.65□□□□□ -1.99
TAF4YMR005W RIB1P38066 345 aa2.65□□□□□ -1.99
TAF4YMR005W YHR022CP38763 256 aa2.65□□□□□ -1.99
TAF4YMR005W YHR180WP38868 163 aa2.65□□□□□ -1.99
TAF4YMR005W RSM25P40496 264 aa2.65□□□□□ -1.99
TAF4YMR005W YKE4P40544 346 aa2.65□□□□□ -1.99
TAF4YMR005W MCM22P47167 239 aa2.65□□□□□ -1.99
TAF4YMR005W CYT2Q00873 224 aa2.65□□□□□ -1.99
TAF4YMR005W USB1Q12208 290 aaKnown RBP2.65□□□□□ -1.99
TAF4YMR005W YCR016WP25617 290 aaKnown RBP2.64□□□□□ -1.99
TAF4YMR005W SRB4P32569 687 aa2.64□□□□□ -1.99
TAF4YMR005W YBR063CP38083 404 aa2.64□□□□□ -1.99
TAF4YMR005W YJR149WP47177 404 aa2.64□□□□□ -1.99
TAF4YMR005W ABF2Q02486 183 aa2.64□□□□□ -1.99
TAF4YMR005W YLR283WQ05867 314 aa2.64□□□□□ -1.99
TAF4YMR005W CDC7P06243 507 aa2.63□□□□□ -1.99
TAF4YMR005W VTC1P40046 129 aaRIP-Chip data2.63□□□□□ -1.99not detected
TAF4YMR005W DSE2P38844 325 aa2.62□□□□□ -1.99
TAF4YMR005W PEX17P40155 199 aa2.62□□□□□ -1.99
TAF4YMR005W PRM10P42946 383 aa2.62□□□□□ -1.99
TAF4YMR005W TRM9P49957 279 aa2.62□□□□□ -1.99
TAF4YMR005W ERV29P53337 310 aa2.62□□□□□ -1.99
TAF4YMR005W TPO4Q12256 659 aa2.62□□□□□ -1.99
TAF4YMR005W YHR139C-AO13536 103 aa2.61□□□□□ -1.99
TAF4YMR005W DDI2P0CH63 225 aa2.61□□□□□ -1.99
TAF4YMR005W DDI3P0CH64 225 aa2.61□□□□□ -1.99
TAF4YMR005W MDH2P22133 377 aa2.61□□□□□ -1.99
TAF4YMR005W MSN4P33749 630 aa2.61□□□□□ -1.99
TAF4YMR005W BCY1P07278 416 aaKnown RBP2.6□□□□□ -1.99
TAF4YMR005W NSA1P53136 463 aaPredicted RBP2.6□□□□□ -1.99
TAF4YMR005W YML108WQ03759 105 aa2.6□□□□□ -1.99
TAF4YMR005W FAS2P19097 1887 aaKnown RBP2.6□□□□□ -1.99
TAF4YMR005W CDC8P00572 216 aa2.59□□□□□ -1.99
TAF4YMR005W MATALPHA1P0CY06 175 aa2.59□□□□□ -1.99
TAF4YMR005W HMLALPHA1P0CY07 175 aa2.59□□□□□ -1.99
TAF4YMR005W CDC10P25342 322 aaKnown RBP2.59□□□□□ -1.99
TAF4YMR005W NTF2P33331 125 aaKnown RBP2.59□□□□□ -1.99
TAF4YMR005W VPS21P36017 210 aaKnown RBP2.59□□□□□ -1.99
TAF4YMR005W RTR1P40084 226 aaPredicted RBP2.59□□□□□ -1.99
TAF4YMR005W TOS8P53147 276 aa2.59□□□□□ -1.99
TAF4YMR005W PMD1P32634 1753 aa2.59□□□□□ -2
TAF4YMR005W RPC17P47076 161 aa2.58□□□□□ -2
TAF4YMR005W YMD8Q03697 442 aa2.58□□□□□ -2
TAF4YMR005W DCN1Q12395 269 aa2.58□□□□□ -2
TAF4YMR005W SPT3P06844 337 aa2.57□□□□□ -2
TAF4YMR005W PET9P18239 318 aaKnown RBP2.57□□□□□ -2
TAF4YMR005W LIA1P47120 325 aaKnown RBP2.57□□□□□ -2
TAF4YMR005W DID2P69771 204 aa2.57□□□□□ -2
TAF4YMR005W YPR170W-BP0C5R9 85 aa2.56□□□□□ -2
TAF4YMR005W SVP26P38869 228 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms