RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C JLP1Q12358 412 aa1.88□□□□□ -2.11
VPS25YJR102C YKL183C-AQ3E765 70 aa1.88□□□□□ -2.11
VPS25YJR102C YIL177CP40434 1758 aa1.87□□□□□ -2.11
VPS25YJR102C YJL225CP40889 1758 aa1.87□□□□□ -2.11
VPS25YJR102C YOL162WP0CF19 215 aa1.87□□□□□ -2.11
VPS25YJR102C STE18P18852 110 aa1.87□□□□□ -2.11
VPS25YJR102C COQ1P18900 473 aa1.87□□□□□ -2.11
VPS25YJR102C MRPL28P36527 147 aa1.87□□□□□ -2.11
VPS25YJR102C MSS2P40990 351 aa1.87□□□□□ -2.11
VPS25YJR102C YRB1P41920 201 aaKnown RBP1.87□□□□□ -2.11
VPS25YJR102C FAR7P43592 221 aa1.87□□□□□ -2.11
VPS25YJR102C BUD25P85052 153 aa1.87□□□□□ -2.11
VPS25YJR102C FLO9P39712 1322 aa1.87□□□□□ -2.11
VPS25YJR102C PRP18P33411 251 aaPredicted RBP1.86□□□□□ -2.11
VPS25YJR102C YKR045CP36138 183 aa1.86□□□□□ -2.11
VPS25YJR102C SVP26P38869 228 aa1.86□□□□□ -2.11
VPS25YJR102C ICE2P40499 491 aa1.86□□□□□ -2.11
VPS25YJR102C RPL27BP0C2H7 136 aaKnown RBP1.85□□□□□ -2.11
VPS25YJR102C RMD6P39975 231 aa1.85□□□□□ -2.11
VPS25YJR102C AVT2P39981 480 aa1.85□□□□□ -2.11
VPS25YJR102C YNL217WP40152 326 aa1.85□□□□□ -2.11
VPS25YJR102C RAD17P48581 401 aa1.85□□□□□ -2.11
VPS25YJR102C BOL2P53082 120 aa1.85□□□□□ -2.11
VPS25YJR102C ARG80P07249 177 aa1.84□□□□□ -2.11
VPS25YJR102C FZF1P32805 299 aa1.84□□□□□ -2.11
VPS25YJR102C AST2P39945 430 aaKnown RBP1.84□□□□□ -2.11
VPS25YJR102C RNH1Q04740 348 aa1.84□□□□□ -2.11
VPS25YJR102C TSC3Q3E790 80 aa1.84□□□□□ -2.11
VPS25YJR102C MET5P47169 1442 aa1.83□□□□□ -2.12
VPS25YJR102C YDR157WA0A023PZE8 133 aa1.83□□□□□ -2.12
VPS25YJR102C CDC33P07260 213 aaKnown RBP1.83□□□□□ -2.12
VPS25YJR102C MGM101P32787 269 aaKnown RBP1.83□□□□□ -2.12
VPS25YJR102C YET1P35723 206 aa1.83□□□□□ -2.12
VPS25YJR102C YRB2P40517 327 aa1.83□□□□□ -2.12
VPS25YJR102C GCN20P43535 752 aaKnown RBP1.83□□□□□ -2.12
VPS25YJR102C EAF6P47128 113 aa1.83□□□□□ -2.12
VPS25YJR102C MGA1P53050 456 aa1.83□□□□□ -2.12
VPS25YJR102C YNR077CP53758 84 aa1.83□□□□□ -2.12
VPS25YJR102C SWP1Q02795 286 aa1.83□□□□□ -2.12
VPS25YJR102C GIS3Q12418 502 aa1.83□□□□□ -2.12
VPS25YJR102C YHR214C-EQ8TGK0 99 aa1.83□□□□□ -2.12
VPS25YJR102C TUS1Q06412 1307 aa1.83□□□□□ -2.12
VPS25YJR102C GCN3P14741 305 aa1.82□□□□□ -2.12
VPS25YJR102C MRPL17P36528 281 aa1.82□□□□□ -2.12
VPS25YJR102C CWC23P52868 283 aaPredicted RBP1.82□□□□□ -2.12
VPS25YJR102C YPL162CQ12042 273 aa1.82□□□□□ -2.12
VPS25YJR102C NCB2Q92317 146 aa1.82□□□□□ -2.12
VPS25YJR102C TIM9O74700 87 aa1.81□□□□□ -2.12
VPS25YJR102C IDH1P28834 360 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
VPS25YJR102C TCA17P32613 152 aa1.81□□□□□ -2.12
VPS25YJR102C PTM1P32857 523 aa1.81□□□□□ -2.12
VPS25YJR102C PRX1P34227 261 aaKnown RBP1.81□□□□□ -2.12
VPS25YJR102C UMP1P38293 148 aa1.81□□□□□ -2.12
VPS25YJR102C YER135CP40082 130 aa1.81□□□□□ -2.12
VPS25YJR102C PDR17P53844 350 aa1.81□□□□□ -2.12
VPS25YJR102C PGA2P53903 129 aa1.81□□□□□ -2.12
VPS25YJR102C BNA7Q04066 261 aa1.81□□□□□ -2.12
VPS25YJR102C CSI2Q08054 341 aa1.81□□□□□ -2.12
VPS25YJR102C SPS18P32572 300 aa1.8□□□□□ -2.12
VPS25YJR102C SNC2P33328 115 aa1.8□□□□□ -2.12
VPS25YJR102C UTP30P36144 274 aaKnown RBP1.8□□□□□ -2.12
VPS25YJR102C IRC18P47056 224 aa1.8□□□□□ -2.12
VPS25YJR102C DOC1P53068 250 aa1.8□□□□□ -2.12
VPS25YJR102C MCP1Q12106 302 aa1.8□□□□□ -2.12
VPS25YJR102C PDR18P53756 1333 aa1.8□□□□□ -2.12
VPS25YJR102C UBR2Q07963 1872 aa1.8□□□□□ -2.12
VPS25YJR102C SEC17P32602 292 aa1.79□□□□□ -2.12
VPS25YJR102C GLE2P40066 365 aa1.79□□□□□ -2.12
VPS25YJR102C SAY1P53324 424 aa1.79□□□□□ -2.12
VPS25YJR102C TIM11P81449 96 aaPredicted RBP1.79□□□□□ -2.12
VPS25YJR102C RPL25P04456 142 aaKnown RBP1.78□□□□□ -2.12
VPS25YJR102C KSS1P14681 368 aa1.78□□□□□ -2.12
VPS25YJR102C BET1P22804 142 aa1.78□□□□□ -2.12
VPS25YJR102C YGL010WP25338 174 aa1.78□□□□□ -2.12
VPS25YJR102C SIP3P38717 1229 aa1.78□□□□□ -2.12
VPS25YJR102C GAA1P39012 614 aa1.78□□□□□ -2.12
VPS25YJR102C GVP36P40531 326 aaKnown RBP1.78□□□□□ -2.12
VPS25YJR102C YLR162WQ06235 118 aa1.78□□□□□ -2.12
VPS25YJR102C TRM5P38793 499 aa1.77□□□□□ -2.13
VPS25YJR102C YGR050CP53231 118 aa1.77□□□□□ -2.13
VPS25YJR102C MDM32Q12171 622 aa1.77□□□□□ -2.13
VPS25YJR102C YFR032C-BQ8TGU2 87 aa1.77□□□□□ -2.13
VPS25YJR102C SEC4P07560 215 aaKnown RBP1.76□□□□□ -2.13
VPS25YJR102C URA5P13298 226 aaKnown RBP1.76□□□□□ -2.13
VPS25YJR102C MER1P16523 270 aa1.76□□□□□ -2.13
VPS25YJR102C NTG1P31378 399 aa1.76□□□□□ -2.13
VPS25YJR102C YDR274CP87283 123 aa1.76□□□□□ -2.13
VPS25YJR102C PET191Q02772 108 aa1.76□□□□□ -2.13
VPS25YJR102C YRA1Q12159 226 aaKnown RBP1.76□□□□□ -2.13
VPS25YJR102C CDC36P06100 191 aaPredicted RBP1.75□□□□□ -2.13
VPS25YJR102C FPR1P20081 114 aaKnown RBP1.75□□□□□ -2.13
VPS25YJR102C TAF14P35189 244 aa1.75□□□□□ -2.13
VPS25YJR102C YBR220CP38318 560 aa1.75□□□□□ -2.13
VPS25YJR102C IKI1P38874 309 aa1.75□□□□□ -2.13
VPS25YJR102C RPL13BP40212 199 aaKnown RBP1.75□□□□□ -2.13
VPS25YJR102C LSM7P53905 115 aaKnown RBP1.75□□□□□ -2.13
VPS25YJR102C YDR249CQ03787 373 aa1.75□□□□□ -2.13
VPS25YJR102C YOL160WQ08321 113 aa1.75□□□□□ -2.13
VPS25YJR102C GPM2Q12008 311 aa1.75□□□□□ -2.13
VPS25YJR102C RPL13AQ12690 199 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 107.9 ms