RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C PHO89P38361 574 aa2.78□□□□□ -1.96
XRN1YGL173C IRC22P40006 225 aa2.78□□□□□ -1.96
XRN1YGL173C TIF34P40217 347 aaKnown RBP2.78□□□□□ -1.96
XRN1YGL173C YIL024CP40543 189 aa2.78□□□□□ -1.96
XRN1YGL173C CDH1P53197 566 aa2.78□□□□□ -1.96
XRN1YGL173C SHY1P53266 389 aa2.78□□□□□ -1.96
XRN1YGL173C TDA1Q03533 586 aa2.78□□□□□ -1.96
XRN1YGL173C THI7Q05998 598 aa2.78□□□□□ -1.96
XRN1YGL173C CNL1Q06333 122 aa2.78□□□□□ -1.96
XRN1YGL173C YCR022CP25620 114 aa2.78□□□□□ -1.97
XRN1YGL173C TFC1P32367 649 aa2.78□□□□□ -1.97
XRN1YGL173C VMA22P38784 181 aa2.78□□□□□ -1.97
XRN1YGL173C YND1P40009 630 aa2.78□□□□□ -1.97
XRN1YGL173C PRM5P40476 318 aa2.78□□□□□ -1.97
XRN1YGL173C RPR2P40571 144 aa2.78□□□□□ -1.97
XRN1YGL173C DIG2Q03373 323 aaKnown RBP2.78□□□□□ -1.97
XRN1YGL173C MAK3Q03503 176 aa2.78□□□□□ -1.97
XRN1YGL173C HNT1Q04344 158 aaKnown RBP2.78□□□□□ -1.97
XRN1YGL173C YOR020W-AQ3E824 90 aa2.78□□□□□ -1.97
XRN1YGL173C CYC3P06182 269 aa2.77□□□□□ -1.97
XRN1YGL173C CSG2P35206 410 aa2.77□□□□□ -1.97
XRN1YGL173C MRPL39P36533 70 aa2.77□□□□□ -1.97
XRN1YGL173C STP1Q00947 519 aa2.77□□□□□ -1.97
XRN1YGL173C RPL40AP0CH08 128 aaKnown RBP2.77□□□□□ -1.97
XRN1YGL173C RPL40BP0CH09 128 aaKnown RBP2.77□□□□□ -1.97
XRN1YGL173C PHO85P17157 305 aa2.77□□□□□ -1.97
XRN1YGL173C YPC1P38298 316 aa2.77□□□□□ -1.97
XRN1YGL173C TRM9P49957 279 aa2.77□□□□□ -1.97
XRN1YGL173C TPC1P53257 314 aa2.77□□□□□ -1.97
XRN1YGL173C YHC1Q05900 231 aaKnown RBP2.77□□□□□ -1.97
XRN1YGL173C YLR036CQ07986 203 aa2.77□□□□□ -1.97
XRN1YGL173C YOL024WQ08172 172 aa2.77□□□□□ -1.97
XRN1YGL173C YOR389WQ08912 624 aa2.77□□□□□ -1.97
XRN1YGL173C RPL28P02406 149 aaKnown RBP2.77□□□□□ -1.97
XRN1YGL173C SGA1P08019 549 aa2.77□□□□□ -1.97
XRN1YGL173C URE2P23202 354 aaKnown RBP2.77□□□□□ -1.97
XRN1YGL173C ERG2P32352 222 aa2.77□□□□□ -1.97
XRN1YGL173C YOX1P34161 385 aa2.77□□□□□ -1.97
XRN1YGL173C CPR5P35176 225 aa2.77□□□□□ -1.97
XRN1YGL173C YBR241CP38142 488 aa2.77□□□□□ -1.97
XRN1YGL173C YHL026CP38740 315 aa2.77□□□□□ -1.97
XRN1YGL173C IPI1P38803 334 aaPredicted RBP2.77□□□□□ -1.97
XRN1YGL173C SRP14P38985 146 aa2.77□□□□□ -1.97
XRN1YGL173C SEO1P39709 593 aa2.77□□□□□ -1.97
XRN1YGL173C CCC1P47818 322 aa2.77□□□□□ -1.97
XRN1YGL173C HSK3P69852 69 aa2.77□□□□□ -1.97
XRN1YGL173C SNO1Q03144 224 aa2.77□□□□□ -1.97
XRN1YGL173C YGP1P38616 354 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C YMR144WP40214 342 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C COQ5P49017 307 aa2.76□□□□□ -1.97
XRN1YGL173C YPS5P53057 165 aa2.76□□□□□ -1.97
XRN1YGL173C RCF2P53721 224 aa2.76□□□□□ -1.97
XRN1YGL173C YMR295CQ03559 197 aa2.76□□□□□ -1.97
XRN1YGL173C TAZ1Q06510 381 aa2.76□□□□□ -1.97
XRN1YGL173C SNX3Q08826 162 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C PNS1Q12412 539 aa2.76□□□□□ -1.97
XRN1YGL173C YBL112CQ3E7Y4 105 aa2.76□□□□□ -1.97
XRN1YGL173C TRP1P00912 224 aa2.76□□□□□ -1.97
XRN1YGL173C INO2P26798 304 aa2.76□□□□□ -1.97
XRN1YGL173C COS8P38723 381 aa2.76□□□□□ -1.97
XRN1YGL173C APS3P47064 194 aa2.76□□□□□ -1.97
XRN1YGL173C RRS1Q08746 203 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C FYV7Q12247 151 aa2.76□□□□□ -1.97
XRN1YGL173C RSA4P25382 515 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C PTM1P32857 523 aa2.76□□□□□ -1.97
XRN1YGL173C GRE3P38715 327 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
XRN1YGL173C AVT6P40074 448 aa2.76□□□□□ -1.97
XRN1YGL173C RNH201P53942 307 aa2.76□□□□□ -1.97
XRN1YGL173C LGE1Q02796 332 aaKnown RBP2.76□□□□□ -1.97
XRN1YGL173C FMP42Q04991 504 aa2.76□□□□□ -1.97
XRN1YGL173C HEM25Q07534 307 aa2.76□□□□□ -1.97
XRN1YGL173C CPR4P25334 318 aa2.76□□□□□ -1.97
XRN1YGL173C PHB2P50085 310 aa2.76□□□□□ -1.97
XRN1YGL173C NBP1P52919 319 aaPredicted RBP2.76□□□□□ -1.97
XRN1YGL173C SLM2P53955 656 aa2.76□□□□□ -1.97
XRN1YGL173C FRQ1Q06389 190 aa2.76□□□□□ -1.97
XRN1YGL173C PFA4Q12006 378 aa2.76□□□□□ -1.97
XRN1YGL173C YPL119C-AQ3E751 87 aa2.76□□□□□ -1.97
XRN1YGL173C SEC14P24280 304 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C FIS1P40515 155 aa2.75□□□□□ -1.97
XRN1YGL173C YGR039WP53225 103 aa2.75□□□□□ -1.97
XRN1YGL173C BOR1P53838 576 aa2.75□□□□□ -1.97
XRN1YGL173C SDH7Q04401 133 aa2.75□□□□□ -1.97
XRN1YGL173C MRX8Q05473 314 aa2.75□□□□□ -1.97
XRN1YGL173C YPQ1Q12010 308 aa2.75□□□□□ -1.97
XRN1YGL173C NMT1P14743 455 aa2.75□□□□□ -1.97
XRN1YGL173C APQ12P40532 138 aa2.75□□□□□ -1.97
XRN1YGL173C VEL1P53058 206 aa2.75□□□□□ -1.97
XRN1YGL173C DIG1Q03063 452 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C MRX11Q03079 207 aa2.75□□□□□ -1.97
XRN1YGL173C UTP15Q04305 513 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C YPR147CQ06522 304 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C YLR112WQ12130 139 aa2.75□□□□□ -1.97
XRN1YGL173C POM33Q12164 279 aa2.75□□□□□ -1.97
XRN1YGL173C ICT1Q12385 394 aa2.75□□□□□ -1.97
XRN1YGL173C SLO1Q3E784 85 aa2.75□□□□□ -1.97
XRN1YGL173C YER078W-AQ3E7A2 54 aa2.75□□□□□ -1.97
XRN1YGL173C YDR034W-BQ6Q5X2 51 aa2.75□□□□□ -1.97
XRN1YGL173C DBF2P22204 572 aa2.75□□□□□ -1.97
XRN1YGL173C VMA7P39111 118 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms