RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C PEX4P29340 183 aa1.54□□□□□ -2.16
PGD1YGL025C ATP7P30902 174 aa1.54□□□□□ -2.16
PGD1YGL025C YBL010CP32788 280 aa1.54□□□□□ -2.16
PGD1YGL025C YBR096WP38256 230 aa1.54□□□□□ -2.16
PGD1YGL025C YER121WP40076 114 aa1.54□□□□□ -2.16
PGD1YGL025C SOK1P40317 901 aa1.54□□□□□ -2.16
PGD1YGL025C PEP8P40335 379 aa1.54□□□□□ -2.16
PGD1YGL025C RFC2P40348 353 aa1.54□□□□□ -2.16
PGD1YGL025C ERG10P41338 398 aaKnown RBP1.54□□□□□ -2.16
PGD1YGL025C GCN20P43535 752 aaKnown RBP1.54□□□□□ -2.16
PGD1YGL025C YFH7P43591 353 aa1.54□□□□□ -2.16
PGD1YGL025C PGA2P53903 129 aa1.54□□□□□ -2.16
PGD1YGL025C YDC1Q02896 317 aa1.54□□□□□ -2.16
PGD1YGL025C YMR279CQ03263 540 aa1.54□□□□□ -2.16
PGD1YGL025C SYC1Q08553 188 aaPredicted RBP1.54□□□□□ -2.16
PGD1YGL025C ATG31Q12421 196 aa1.54□□□□□ -2.16
PGD1YGL025C LYS2P07702 1392 aa1.54□□□□□ -2.16
PGD1YGL025C BUD4P47136 1447 aa1.54□□□□□ -2.16
PGD1YGL025C SPT6P23615 1451 aaKnown RBP1.54□□□□□ -2.16
PGD1YGL025C YKR104WP0CE69 306 aa1.53□□□□□ -2.16
PGD1YGL025C RPO41P13433 1351 aaKnown RBP1.53□□□□□ -2.16
PGD1YGL025C FBA1P14540 359 aaKnown RBP1.53□□□□□ -2.16
PGD1YGL025C PET9P18239 318 aaKnown RBP1.53□□□□□ -2.16
PGD1YGL025C VPS15P22219 1454 aa1.53□□□□□ -2.16
PGD1YGL025C TCA17P32613 152 aa1.53□□□□□ -2.16
PGD1YGL025C CYC2P38909 366 aa1.53□□□□□ -2.16
PGD1YGL025C AST2P39945 430 aaKnown RBP1.53□□□□□ -2.16
PGD1YGL025C YER085CP40058 173 aa1.53□□□□□ -2.16
PGD1YGL025C YGL204CP53089 101 aa1.53□□□□□ -2.16
PGD1YGL025C MDS3P53094 1487 aa1.53□□□□□ -2.16
PGD1YGL025C YGL159WP53110 370 aa1.53□□□□□ -2.16
PGD1YGL025C USE1P53146 245 aa1.53□□□□□ -2.16
PGD1YGL025C SSK2P53599 1579 aa1.53□□□□□ -2.16
PGD1YGL025C RHO3Q00245 231 aaKnown RBP1.53□□□□□ -2.16
PGD1YGL025C SWP1Q02795 286 aa1.53□□□□□ -2.16
PGD1YGL025C GOT1Q03554 138 aa1.53□□□□□ -2.16
PGD1YGL025C YMD8Q03697 442 aa1.53□□□□□ -2.16
PGD1YGL025C YLR283WQ05867 314 aa1.53□□□□□ -2.16
PGD1YGL025C YLR030WQ07967 263 aa1.53□□□□□ -2.16
PGD1YGL025C YLR031WQ07978 186 aa1.53□□□□□ -2.16
PGD1YGL025C CSM4Q08955 156 aa1.53□□□□□ -2.16
PGD1YGL025C SMC4Q12267 1418 aa1.53□□□□□ -2.16
PGD1YGL025C SNU23Q12368 194 aaPredicted RBP1.53□□□□□ -2.16
PGD1YGL025C TY1B-HO13535 1793 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-DR5P0C2I2 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-DR6P0C2I3 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-LR2P0C2I5 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-LR3P0C2I6 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C TY1B-PR1P0C2I9 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C TY1B-PR2P0C2J0 1756 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-PR3P0C2J1 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C TY1B-JR1P47098 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-ML2Q03434 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C TY1B-ER1Q03612 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-ML1Q04711 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C TY1B-GR2Q12269 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-OLQ12273 1755 aa1.52□□□□□ -2.17
PGD1YGL025C TY1B-PLQ12414 1755 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C THO2P53552 1597 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C IRC20Q06554 1556 aa1.52□□□□□ -2.17
PGD1YGL025C NUP170P38181 1502 aa1.52□□□□□ -2.17
PGD1YGL025C TAF2P23255 1407 aa1.52□□□□□ -2.17
PGD1YGL025C ROM2P51862 1356 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C IPP1P00817 287 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C RPL25P04456 142 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C RPL35AP0CX84 120 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C RPL35BP0CX85 120 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C STF2P16965 84 aa1.52□□□□□ -2.17
PGD1YGL025C COQ1P18900 473 aa1.52□□□□□ -2.17
PGD1YGL025C HOM6P31116 359 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C AME1P38313 324 aa1.52□□□□□ -2.17
PGD1YGL025C GOS1P38736 223 aa1.52□□□□□ -2.17
PGD1YGL025C CIN5P40917 295 aa1.52□□□□□ -2.17
PGD1YGL025C YGR201CP42936 225 aa1.52□□□□□ -2.17
PGD1YGL025C GLG2P47011 380 aa1.52□□□□□ -2.17
PGD1YGL025C LSM1P47017 172 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C CCC1P47818 322 aa1.52□□□□□ -2.17
PGD1YGL025C YGL235WP53071 178 aa1.52□□□□□ -2.17
PGD1YGL025C YGR026WP53217 278 aa1.52□□□□□ -2.17
PGD1YGL025C YGR042WP53227 271 aa1.52□□□□□ -2.17
PGD1YGL025C NOP13P53883 403 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
PGD1YGL025C NHP10Q03435 203 aa1.52□□□□□ -2.17
PGD1YGL025C YDR249CQ03787 373 aa1.52□□□□□ -2.17
PGD1YGL025C FAR8Q05040 523 aa1.52□□□□□ -2.17
PGD1YGL025C YOR186WQ08560 144 aa1.52□□□□□ -2.17
PGD1YGL025C RRS1Q08746 203 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C GPM2Q12008 311 aa1.52□□□□□ -2.17
PGD1YGL025C GET4Q12125 312 aa1.52□□□□□ -2.17
PGD1YGL025C YRA1Q12159 226 aaKnown RBP1.52□□□□□ -2.17
PGD1YGL025C ATO3Q12359 275 aa1.52□□□□□ -2.17
PGD1YGL025C YCL001W-BQ96VH2 84 aa1.52□□□□□ -2.17
PGD1YGL025C PDR10P51533 1564 aa1.51□□□□□ -2.17
PGD1YGL025C YCF1P39109 1515 aaKnown RBP1.51□□□□□ -2.17
PGD1YGL025C LTE1P07866 1435 aa1.51□□□□□ -2.17
PGD1YGL025C KIN28P06242 306 aa1.51□□□□□ -2.17
PGD1YGL025C RPL24BP24000 155 aaKnown RBP1.51□□□□□ -2.17
PGD1YGL025C ADE1P27616 306 aa1.51□□□□□ -2.17
PGD1YGL025C RPC19P28000 142 aaKnown RBP1.51□□□□□ -2.17
PGD1YGL025C PPA2P28239 310 aa1.51□□□□□ -2.17
PGD1YGL025C ERG24P32462 438 aaKnown RBP1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms