RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	SIR4	P11978	1358 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	COX5A	P00424	153 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	RPS24A	P0CX31	135 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	RPS24B	P0CX32	135 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	MATALPHA1	P0CY06	175 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	HMLALPHA1	P0CY07	175 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	TCP1	P12612	559 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	KSS1	P14681	368 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YPK2	P18961	677 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	CKS1	P20486	150 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	BET1	P22804	142 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	MEI4	P29467	408 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	TFC1	P32367	649 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	NTF2	P33331	125 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	PRX1	P34227	261 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	YET1	P35723	206 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
SWF1	YDR126W	VPS51	P36116	164 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YBR096W	P38256	230 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	UMP1	P38293	148 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	ERV15	P38312	142 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	SHG1	P38337	142 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	MIC12	P38341	106 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	ERG28	P40030	148 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	PEX17	P40155	199 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	PGD1	P40356	397 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	ICE2	P40499	491 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	ADO1	P47143	340 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	MGA1	P53050	456 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	HOP2	P53187	214 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	SAY1	P53324	424 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	ERV29	P53337	310 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YNR062C	P53748	327 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YNL010W	P53981	241 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	BUD25	P85052	153 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	CDC14	Q00684	551 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	MRPS8	Q03799	155 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	PLP1	Q04004	230 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	LPP1	Q04396	274 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	DYN3	Q04949	312 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	NEJ1	Q06148	342 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YLR031W	Q07978	186 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	YLR036C	Q07986	203 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	NIP7	Q08962	181 aa	Known RBP	0.61	□□□□□ -2.31
SWF1	YDR126W	ATO3	Q12359	275 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	PSF1	Q12488	208 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	SAC3	P46674	1301 aa		0.61	□□□□□ -2.31
SWF1	YDR126W	CDC28	P00546	298 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	HTB1	P02293	131 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	HTB2	P02294	131 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	REP2	P03872	296 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	CDC33	P07260	213 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	YPR170W-B	P0C5R9	85 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	SNF4	P12904	322 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	GRX2	P17695	143 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	DBF2	P22204	572 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	YCR090C	P25654	182 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	OAC1	P32332	324 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	CBT1	P36038	271 aa	Predicted RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	MSA2	P36157	363 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	YCR087C-A	P37263	153 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	ECM33	P38248	429 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	PHO88	P38264	188 aa	Predicted RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	YBR209W	P38311	105 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	YBR219C	P38317	127 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	YBR285W	P38354	144 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	URA8	P38627	578 aa	Predicted RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	PDS1	P40316	373 aa	Predicted RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	YRB2	P40517	327 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	TIR3	P40552	269 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	RPL33B	P41056	107 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	FMP32	P43557	207 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	RPA43	P46669	326 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	AIF1	P52923	378 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	TOS8	P53147	276 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	LSM7	P53905	115 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	COG5	P53951	403 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	SWP1	Q02795	286 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	ATG38	Q05789	226 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	YLR179C	Q06252	201 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	ARR2	Q06597	130 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	GPM2	Q12008	311 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	RIO1	Q12196	484 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	YKL183C-A	Q3E765	70 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	YPR014C	Q6B0W2	109 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	MET5	P47169	1442 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	SWI1	P09547	1314 aa		0.6	□□□□□ -2.31
SWF1	YDR126W	IKI3	Q06706	1349 aa	Known RBP	0.6	□□□□□ -2.31
SWF1	YDR126W	CDC36	P06100	191 aa	Predicted RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	CPA1	P07258	411 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	SEC4	P07560	215 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	YHR032W-A	P0C5N6	59 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	DDI2	P0CH63	225 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	DDI3	P0CH64	225 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	RPL2A	P0CX45	254 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	RPL2B	P0CX46	254 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	MATALPHA2	P0CY08	210 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	HMLALPHA2	P0CY09	210 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	RPB3	P16370	318 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	MER1	P16523	270 aa		0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms