RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W APE2P32454 952 aaKnown RBP1.93□□□□□ -2.1
VPS41YDR080W NAT2P37293 288 aa1.93□□□□□ -2.1
VPS41YDR080W RIO2P40160 425 aaKnown RBP1.93□□□□□ -2.1
VPS41YDR080W AGP3P43548 558 aa1.93□□□□□ -2.1
VPS41YDR080W MRX5P47007 382 aa1.93□□□□□ -2.1
VPS41YDR080W SSN8P47821 323 aa1.93□□□□□ -2.1
VPS41YDR080W YGL159WP53110 370 aa1.93□□□□□ -2.1
VPS41YDR080W AAH1P53909 347 aa1.93□□□□□ -2.1
VPS41YDR080W ELP6Q04868 273 aa1.93□□□□□ -2.1
VPS41YDR080W PDC2P32896 925 aa1.93□□□□□ -2.1
VPS41YDR080W CCS1P40202 249 aaKnown RBP1.93□□□□□ -2.1
VPS41YDR080W PRM5P40476 318 aa1.93□□□□□ -2.1
VPS41YDR080W TTI2P47168 421 aa1.93□□□□□ -2.1
VPS41YDR080W NQM1P53228 333 aaPredicted RBP1.93□□□□□ -2.1
VPS41YDR080W GPI1P53306 609 aa1.93□□□□□ -2.1
VPS41YDR080W HOT1Q03213 719 aa1.93□□□□□ -2.1
VPS41YDR080W ORT1Q12375 292 aa1.93□□□□□ -2.1
VPS41YDR080W YDL007C-AQ2V2Q0 85 aa1.93□□□□□ -2.1
VPS41YDR080W YOL159C-AQ3E769 90 aa1.93□□□□□ -2.1
VPS41YDR080W KIN28P06242 306 aa1.92□□□□□ -2.1
VPS41YDR080W ATG22P25568 528 aa1.92□□□□□ -2.1
VPS41YDR080W PEX4P29340 183 aa1.92□□□□□ -2.1
VPS41YDR080W YKR015CP36111 568 aa1.92□□□□□ -2.1
VPS41YDR080W SBE22P38814 852 aa1.92□□□□□ -2.1
VPS41YDR080W SFH5P47008 294 aa1.92□□□□□ -2.1
VPS41YDR080W YJL118WP47022 219 aa1.92□□□□□ -2.1
VPS41YDR080W YLR152CP54072 576 aa1.92□□□□□ -2.1
VPS41YDR080W RPL21AQ02753 160 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W NEJ1Q06148 342 aa1.92□□□□□ -2.1
VPS41YDR080W MPD1Q12404 318 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W RPL21BQ12672 160 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W ERG2P32352 222 aa1.92□□□□□ -2.1
VPS41YDR080W ZRT3P34240 503 aa1.92□□□□□ -2.1
VPS41YDR080W HPM1P40481 377 aa1.92□□□□□ -2.1
VPS41YDR080W HMS2P47175 358 aa1.92□□□□□ -2.1
VPS41YDR080W YMR099CQ03161 297 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W OST6Q03723 332 aa1.92□□□□□ -2.1
VPS41YDR080W PEX12Q04370 399 aa1.92□□□□□ -2.1
VPS41YDR080W ADH2P00331 348 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W STE18P18852 110 aa1.92□□□□□ -2.1
VPS41YDR080W RPL5P26321 297 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W ERV1P27882 189 aa1.92□□□□□ -2.1
VPS41YDR080W YER079WP40052 210 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W SPR6Q01684 191 aa1.92□□□□□ -2.1
VPS41YDR080W YDR239CQ03780 787 aa1.92□□□□□ -2.1
VPS41YDR080W FIN1Q03898 291 aa1.92□□□□□ -2.1
VPS41YDR080W TSR2Q06672 205 aaKnown RBP1.92□□□□□ -2.1
VPS41YDR080W CDC28P00546 298 aaKnown RBP1.91□□□□□ -2.1
VPS41YDR080W CPR1P14832 162 aaKnown RBP1.91□□□□□ -2.1
VPS41YDR080W PCL1P24867 279 aa1.91□□□□□ -2.1
VPS41YDR080W MRPL6P32904 214 aa1.91□□□□□ -2.1
VPS41YDR080W PRS2P38620 318 aaKnown RBP1.91□□□□□ -2.1
VPS41YDR080W PXR1P53335 271 aaPredicted RBP1.91□□□□□ -2.1
VPS41YDR080W YDR114CQ04597 100 aa1.91□□□□□ -2.1
VPS41YDR080W MHR1Q06630 226 aa1.91□□□□□ -2.1
VPS41YDR080W YJR112W-AQ3E743 109 aa1.91□□□□□ -2.1
VPS41YDR080W COX9P07255 59 aa1.91□□□□□ -2.1
VPS41YDR080W IMP1P28627 190 aa1.91□□□□□ -2.1
VPS41YDR080W VMA6P32366 345 aaKnown RBP1.91□□□□□ -2.1
VPS41YDR080W BMT5P40493 336 aa1.91□□□□□ -2.1
VPS41YDR080W YGR016WP53209 190 aa1.91□□□□□ -2.1
VPS41YDR080W YGL041W-AP0C5N3 154 aa1.9□□□□□ -2.1
VPS41YDR080W CKA1P15790 372 aa1.9□□□□□ -2.1
VPS41YDR080W YEL045CP32616 141 aa1.9□□□□□ -2.1
VPS41YDR080W RAD23P32628 398 aaKnown RBP1.9□□□□□ -2.1
VPS41YDR080W RTC2P38279 296 aa1.9□□□□□ -2.1
VPS41YDR080W YJR056CP47115 236 aa1.9□□□□□ -2.1
VPS41YDR080W USE1P53146 245 aa1.9□□□□□ -2.1
VPS41YDR080W PGA1P53896 198 aa1.9□□□□□ -2.1
VPS41YDR080W SUB1P54000 292 aaKnown RBP1.9□□□□□ -2.1
VPS41YDR080W VAM3Q12241 283 aa1.9□□□□□ -2.1
VPS41YDR080W DGK1Q12382 290 aa1.9□□□□□ -2.1
VPS41YDR080W PCL9Q12477 304 aa1.9□□□□□ -2.1
VPS41YDR080W ATG40Q99325 256 aa1.9□□□□□ -2.1
VPS41YDR080W SAL1D6W196 494 aa1.9□□□□□ -2.11
VPS41YDR080W SOD1P00445 154 aaKnown RBP1.9□□□□□ -2.11
VPS41YDR080W OAC1P32332 324 aa1.9□□□□□ -2.11
VPS41YDR080W ALK2P32789 676 aaPredicted RBP1.9□□□□□ -2.11
VPS41YDR080W SRY1P36007 326 aa1.9□□□□□ -2.11
VPS41YDR080W FAR7P43592 221 aa1.9□□□□□ -2.11
VPS41YDR080W ERJ5P43613 295 aaPredicted RBP1.9□□□□□ -2.11
VPS41YDR080W PRM8P53174 237 aa1.9□□□□□ -2.11
VPS41YDR080W CRH1P53301 507 aa1.9□□□□□ -2.11
VPS41YDR080W ASI3P53983 676 aa1.9□□□□□ -2.11
VPS41YDR080W SFH1Q06168 426 aa1.9□□□□□ -2.11
VPS41YDR080W NOC4Q06512 552 aaPredicted RBP1.9□□□□□ -2.11
VPS41YDR080W VIK1Q12045 647 aa1.9□□□□□ -2.11
VPS41YDR080W RFM1Q12192 310 aa1.9□□□□□ -2.11
VPS41YDR080W ADK1P07170 222 aaKnown RBP1.89□□□□□ -2.11
VPS41YDR080W MATALPHA1P0CY06 175 aa1.89□□□□□ -2.11
VPS41YDR080W HMLALPHA1P0CY07 175 aa1.89□□□□□ -2.11
VPS41YDR080W ARO4P32449 370 aaKnown RBP1.89□□□□□ -2.11
VPS41YDR080W YBR137WP38276 179 aa1.89□□□□□ -2.11
VPS41YDR080W MIC12P38341 106 aa1.89□□□□□ -2.11
VPS41YDR080W DLS1P40366 167 aa1.89□□□□□ -2.11
VPS41YDR080W COG5P53951 403 aa1.89□□□□□ -2.11
VPS41YDR080W CPR2P23285 205 aa1.89□□□□□ -2.11
VPS41YDR080W YGL204CP53089 101 aa1.89□□□□□ -2.11
VPS41YDR080W TOS8P53147 276 aa1.89□□□□□ -2.11
VPS41YDR080W SRL4Q03085 281 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms