RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RRT7Q07829 113 aa4.3□□□□□ -1.72
SCM3YDL139C TFC7Q12415 435 aa4.3□□□□□ -1.72
SCM3YDL139C GCN1P33892 2672 aaKnown RBP4.3□□□□□ -1.72
SCM3YDL139C CDC36P06100 191 aaPredicted RBP4.29□□□□□ -1.72
SCM3YDL139C MRP2P10663 115 aaPredicted RBP4.29□□□□□ -1.72
SCM3YDL139C CDC23P16522 626 aa4.29□□□□□ -1.72
SCM3YDL139C AFG1P32317 509 aa4.29□□□□□ -1.72
SCM3YDL139C KRE6P32486 720 aa4.29□□□□□ -1.72
SCM3YDL139C MNS1P32906 549 aa4.29□□□□□ -1.72
SCM3YDL139C SWD3P38123 315 aa4.29□□□□□ -1.72
SCM3YDL139C VMA7P39111 118 aa4.29□□□□□ -1.72
SCM3YDL139C SYS1P41544 203 aa4.29□□□□□ -1.72
SCM3YDL139C NIF3P53081 288 aa4.29□□□□□ -1.72
SCM3YDL139C RSM27P53305 110 aa4.29□□□□□ -1.72
SCM3YDL139C TSA2Q04120 196 aa4.29□□□□□ -1.72
SCM3YDL139C YNG1Q08465 219 aa4.29□□□□□ -1.72
SCM3YDL139C FRE3Q08905 711 aa4.29□□□□□ -1.72
SCM3YDL139C CDC28P00546 298 aaKnown RBP4.28□□□□□ -1.72
SCM3YDL139C CBP6P07253 162 aaPredicted RBP4.28□□□□□ -1.72
SCM3YDL139C PDX1P16451 410 aa4.28□□□□□ -1.72
SCM3YDL139C SAG1P20840 650 aa4.28□□□□□ -1.72
SCM3YDL139C MRP17P28778 131 aa4.28□□□□□ -1.72
SCM3YDL139C PEX4P29340 183 aa4.28□□□□□ -1.72
SCM3YDL139C OCH1P31755 480 aa4.28□□□□□ -1.72
SCM3YDL139C REC114P32841 428 aa4.28□□□□□ -1.72
SCM3YDL139C ARC40P38328 384 aaKnown RBP4.28□□□□□ -1.72
SCM3YDL139C CRH1P53301 507 aa4.28□□□□□ -1.72
SCM3YDL139C YML018CQ03730 393 aa4.28□□□□□ -1.72
SCM3YDL139C YDR248CQ03786 193 aa4.28□□□□□ -1.72
SCM3YDL139C THI74Q04083 370 aa4.28□□□□□ -1.72
SCM3YDL139C FIT3Q08907 204 aa4.28□□□□□ -1.72
SCM3YDL139C YPL278CQ08990 100 aa4.28□□□□□ -1.72
SCM3YDL139C YDL180WQ12301 547 aa4.28□□□□□ -1.72
SCM3YDL139C PET20Q99373 253 aa4.28□□□□□ -1.72
SCM3YDL139C RPI1P23250 407 aaKnown RBP4.27□□□□□ -1.73
SCM3YDL139C CPR4P25334 318 aa4.27□□□□□ -1.73
SCM3YDL139C YCR025CP25352 136 aa4.27□□□□□ -1.73
SCM3YDL139C GLC7P32598 312 aaKnown RBP4.27□□□□□ -1.73
SCM3YDL139C YER079WP40052 210 aaKnown RBP4.27□□□□□ -1.73
SCM3YDL139C YIL029CP40538 142 aa4.27□□□□□ -1.73
SCM3YDL139C MOB2P43563 287 aa4.27□□□□□ -1.73
SCM3YDL139C YJL016WP47072 561 aa4.27□□□□□ -1.73
SCM3YDL139C AVT4P50944 713 aa4.27□□□□□ -1.73
SCM3YDL139C HRI1Q05905 244 aaKnown RBP4.27□□□□□ -1.73
SCM3YDL139C FRE8Q12209 686 aa4.27□□□□□ -1.73
SCM3YDL139C YLR108CQ12259 485 aa4.27□□□□□ -1.73
SCM3YDL139C IZH2Q12442 317 aa4.27□□□□□ -1.73
SCM3YDL139C COA2Q3E823 68 aa4.27□□□□□ -1.73
SCM3YDL139C HEM4P06174 275 aa4.26□□□□□ -1.73
SCM3YDL139C RPL30P14120 105 aaKnown RBP4.26□□□□□ -1.73
SCM3YDL139C MIR1P23641 311 aaKnown RBP4.26□□□□□ -1.73
SCM3YDL139C COQ3P27680 312 aa4.26□□□□□ -1.73
SCM3YDL139C IMP1P28627 190 aa4.26□□□□□ -1.73
SCM3YDL139C ERG2P32352 222 aa4.26□□□□□ -1.73
SCM3YDL139C RPB7P34087 171 aa4.26□□□□□ -1.73
SCM3YDL139C YMR262WP38430 313 aa4.26□□□□□ -1.73
SCM3YDL139C AGX1P43567 385 aa4.26□□□□□ -1.73
SCM3YDL139C YGL262WP53054 175 aa4.26□□□□□ -1.73
SCM3YDL139C MTM1P53320 366 aa4.26□□□□□ -1.73
SCM3YDL139C CWC25P53854 179 aaKnown RBP4.26□□□□□ -1.73
SCM3YDL139C ERV25P54837 211 aaKnown RBP4.26□□□□□ -1.73
SCM3YDL139C CAC2Q04199 468 aa4.26□□□□□ -1.73
SCM3YDL139C RTT103Q05543 409 aa4.26□□□□□ -1.73
SCM3YDL139C RAF1Q06891 181 aa4.26□□□□□ -1.73
SCM3YDL139C HUG1Q6Q5K6 68 aa4.26□□□□□ -1.73
SCM3YDL139C SCEIP03882 235 aa4.25□□□□□ -1.73
SCM3YDL139C MSW1P04803 379 aa4.25□□□□□ -1.73
SCM3YDL139C VMA16P23968 213 aa4.25□□□□□ -1.73
SCM3YDL139C ERG3P32353 365 aa4.25□□□□□ -1.73
SCM3YDL139C MCH2P36032 473 aa4.25□□□□□ -1.73
SCM3YDL139C MRPL39P36533 70 aa4.25□□□□□ -1.73
SCM3YDL139C BFR1P38934 470 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
SCM3YDL139C SMB1P40018 196 aaKnown RBP4.25□□□□□ -1.73
SCM3YDL139C YIR035CP40579 254 aa4.25□□□□□ -1.73
SCM3YDL139C SSN8P47821 323 aa4.25□□□□□ -1.73
SCM3YDL139C GLO1P50107 326 aa4.25□□□□□ -1.73
SCM3YDL139C MRPL50P53724 139 aa4.25□□□□□ -1.73
SCM3YDL139C YMR279CQ03263 540 aa4.25□□□□□ -1.73
SCM3YDL139C RCE1Q03530 315 aa4.25□□□□□ -1.73
SCM3YDL139C YPR098CQ06089 161 aa4.25□□□□□ -1.73
SCM3YDL139C ATG31Q12421 196 aa4.25□□□□□ -1.73
SCM3YDL139C YOR032W-AQ8TGS1 66 aa4.25□□□□□ -1.73
SCM3YDL139C RPL39P04650 51 aa4.24□□□□□ -1.73
SCM3YDL139C SPS100P13130 326 aa4.24□□□□□ -1.73
SCM3YDL139C TRR1P29509 319 aaKnown RBP4.24□□□□□ -1.73
SCM3YDL139C COS8P38723 381 aa4.24□□□□□ -1.73
SCM3YDL139C CTR2P38865 189 aa4.24□□□□□ -1.73
SCM3YDL139C UIP3P39547 235 aa4.24□□□□□ -1.73
SCM3YDL139C IDP2P41939 412 aa4.24□□□□□ -1.73
SCM3YDL139C GON7P46984 123 aa4.24□□□□□ -1.73
SCM3YDL139C YJR011CP47086 261 aaPredicted RBP4.24□□□□□ -1.73
SCM3YDL139C NRK1P53915 240 aa4.24□□□□□ -1.73
SCM3YDL139C YDR387CQ04162 555 aa4.24□□□□□ -1.73
SCM3YDL139C HNT1Q04344 158 aaKnown RBP4.24□□□□□ -1.73
SCM3YDL139C ANT1Q06497 328 aa4.24□□□□□ -1.73
SCM3YDL139C YOR186WQ08560 144 aa4.24□□□□□ -1.73
SCM3YDL139C HNT3Q08702 217 aa4.24□□□□□ -1.73
SCM3YDL139C ATG5Q12380 294 aa4.24□□□□□ -1.73
SCM3YDL139C UBA3Q99344 299 aa4.24□□□□□ -1.73
SCM3YDL139C TDH3P00359 332 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms